Puntigrus tetrazona (Sumatra barb): 122335436
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Entry
122335436 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
ptet01001
]
122335436
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122335436
Enzymes [BR:
ptet01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122335436
Protein kinases [BR:
ptet01001
]
Serine/threonine kinases: Other
Other
122335436
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122335436
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WD40
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Motif
Other DBs
NCBI-GeneID:
122335436
NCBI-ProteinID:
XP_043089240
LinkDB
All DBs
Position
Unknown
AA seq
1534 aa
AA seq
DB search
MASAGDGSVDSKAELSALLEQWEREQQGSTNELLNILTKISELVERETEEYHKADPDPFD
DRHPGRADPECMLGHLLKILFKNDDFMNALVNSYVMSSREVALNXAACRLLLNIMPGLET
AVVFQEKEGIVERLFKWAQEAEQPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQEKEAENRKDSKRPSKNLAPLLPLDEEAVDGEFVPNAHAENHESRKTDSDAELQPV
SAARSLGRAYTGMKGLMKPAAAVPLELDETDGPVEGLRNWRKKENGGKVKQKLNFSLPEP
ERSFSELSNSSWTEMSPWVIGNNYHLYPLTPXIEQRLILQYLTPLGEYQELLAVFMQLGA
RELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVPKLLEIPRPSMAATG
VSLCLYYLAYNQDAMERVCMLPHSLLSEVVSYTLWLLECSHASGCCHATMFFSICFSFRA
VLELFDKQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRYFEAHL
AIKVEQVKQSLQRTEGGAPIHPQPYYKACSYTHEQVVEMVEFLIEFGPARLYWEPAEVFH
KLSCVQLLLQLISIACDWRTYYGRADTVRYALDILSILTVIPKTQLLLSENVAVLDENGS
TISTVGMSIVLVVAEGEVFVNDAEIQKSALQVIINCVCAPDKRVSSIGKFISGTPRRRLP
QTHRASESVLAKMWNVVQSNNGIKVLLSLLTIKMPITDADQIRALACKALVGLARSAAVR
QIISKLPLFSSGQIQQLMKEPVLQDKRSEHVRFCKYAAELIERVSGKPLLIGTDVSLARL
QRASVVAQSRISFPEKELLLLIRNHLLSKGLTDTATALTKEAELPMGLHALAHASVPPFT
PVSVATPPSPAAGIPRTPRLTNGVAGRLGGHTPHTLPLHQPRPSTSQAPPPPPPAVSHHS
NGSPLIGRIVFSRERPSPCAAAGGKRPKVLRQKSDHGAFSQSPAMKKQLDRHLPSPPTLD
SIITEYLREQHARCKNPVTTCPPFSLFTPHQCPESKQRRQAPTNFTSRHTRRVVYPKYGG
VDGGCFDRHLIFSRFRPISVFREAEEDESGFMCCAFSARERFLMLGTCTGQLKLYNVFSG
QEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDDHYVEFS
KLSQDRVIGTKEHIAHIYDIQTGQKLLTLNNPDLANNYKRNCATFNPTDDLVLNDGVMWD
VRTSQAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRIVFNNNG
TVIYGAMLQADDEDDMMEQQMKSPFGSSFRTFDATDYKPIATIDVKRNIFDLCTDTKDCY
LAVIENQDSINMDTVCRLYEVGRQRLAEEEEDEEDQEEDDQDEEDDDDSDDDIDDIDTDP
LLAELENENNGEEEEEEEDGEQDFSPSDDEEVARLLDEEADDDEDDDDDDDDEDDDDDDE
DSDDNERDVELVLDNTDSSDNSDLEDDIILSLNE
NT seq
4605 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccggggatggcagcgttgactctaaagcggagctgagcgctctgctggag
cagtgggagagagaacagcagggaagcacaaacgaactgctcaacatactgaccaagatt
tcggagcttgttgaaagggagacggaggagtatcataaggctgatcctgacccgtttgat
gaccgccatccggggcgggcagacccagagtgcatgttgggacacctgttgaaaatcttg
ttcaagaatgatgattttatgaatgcgctggtgaactcgtatgtgatgagcagccgcgag
gtggcgctgaacnacgctgcatgcagactgctgctgaacatcatgcctggcctcgagacg
gccgtggtctttcaagagaaggaagggattgtggagcgattgtttaaatgggctcaggag
gcagagcagcctctccgaatctacgccacaggcctgctggctggagccatggagaaccag
gacatcgccgccaactatcgcgaggaaaactctgtactggttcctttgatgctgcagaga
ctgagggagcttcaggaaaaggaggcagagaacaggaaggacagcaaacgtccaagcaag
aatctggccccactgctgcccctggacgaggaggccgtggacggagagttcgttcctaat
gctcacgctgagaatcacgagtcgagaaaaaccgactctgatgctgagctgcagcccgtc
tctgctgcgcggagcttggggagggcttacacgggcatgaagggcctcatgaagcccgct
gctgcagtgcctttagagctggacgagacggacggcccagtggagggcttgaggaactgg
aggaagaaggagaacggtggcaaagtcaagcagaagctgaacttctcgctgccggagccg
gagcgcagcttcagtgagctgtccaacagcagctggactgagatgagcccgtgggtgatc
gggaacaactaccacctgtatcctctcacaccgnggatagagcagcgcctgatcctgcag
tatctcaccccgctgggagaataccaagagttgctggctgtcttcatgcagctcggagct
cgtgagctgctgatgcactacatggacctcaaacagacgaacgacgttcagctcacgttt
gaagccctgaagtatcttgcgtctctcctcctccataaaaagtttgctgctgagtttgtg
gctcatggtggcgtgcccaagctgctggagatcccgcggccttccatggctgccaccggc
gtctctctgtgcctctattacctcgcatacaaccaggacgctatggagagggtgtgtatg
ctgcctcactcgctgctgtcggaggtggtgagctacacgctgtggctcctggagtgctct
cacgcctcgggctgctgccacgccaccatgttcttctccatctgtttctccttcagagcc
gtgctcgagctcttcgacaaacaggacggcctgcggcggctcgtcaacctgattagcact
ctggagatcttaaacccagaggaccagggtgcgctgttgagtgacgacgagatcttctcc
agcagacagactgcaaaacacacctgcatggcgctgcgcaggtattttgaggcccacctg
gctattaaagttgagcaggtcaagcagtctttgcagcgaaccgagggaggagcgccaata
caccctcagccctactacaaggcttgctcctacacccatgagcaggtggtagagatggtg
gagttcctgattgagtttggaccagctcgtttgtactgggagcctgccgaggtcttccac
aaactgtcctgtgtgcagctcctcctgcagctcatttctatcgcctgcgactggagaaca
tactacggcagggctgacacggtgaggtacgctttggatatcttaagcattttgacagtc
attcctaaaacgcagctgctgttgtctgagaacgtcgccgtgctggatgagaatggctcc
accatctccactgttggtatgagcatagtgctggtcgtggcagagggtgaggtgttcgta
aatgatgcagaaatccagaagtcggccctgcaggtgatcataaactgcgtctgtgctcct
gacaaacgcgtctctagcatcggcaagttcatctccgggaccccgcgtcgccgtctgcca
cagacccaccgtgccagcgagagcgtcctggccaagatgtggaacgtggtgcagtcgaac
aatggcattaaagtgctgctgtcgctgctcaccatcaagatgcccatcaccgatgccgac
cagatccgcgctctggcgtgcaaagctctggttgggttggcacgcagcgccgcggtgcga
cagatcatcagcaagctcccgctgttcagcagcggacagatccagcagctgatgaaggag
cctgtgcttcaggacaagcgcagcgagcatgtgcgcttctgcaagtacgcagccgaactc
atagagcgagtgtccgggaagcctctgctaatcggcacagatgtttccctggcgcgactg
cagagggctagcgtagtggcacagtcgcgcatttcgtttcccgagaaggagcttctgttg
cttattcggaatcacctgttgtctaaaggtctcacggacacagcgacggcgctgacgaaa
gaagccgagctgcccatggggctgcatgctctggctcacgctagcgtgccgccgttcacc
cccgtttctgtggccacgcctccgtctcccgccgctggcatcccacggactcctcgactc
accaacggagtcgcgggccgcctgggaggccacaccccccacacgctgcctcttcaccag
ccccgcccctccacctcgcaagccccaccccctcctccacctgcggtttctcaccacagt
aatggttctccgctcatcggtcgcatcgtgttctcgcgggagcggccgtcaccgtgtgca
gctgcgggggggaagaggccaaaagtgttgcggcagaaatcagatcatggtgctttcagc
cagagtccggccatgaagaaacagctggacagacatctgccctctccgcccactctagac
agtatcataacagagtatttacgcgagcagcacgcccgatgcaagaacccagtgaccaca
tgtcctcccttcagcctcttcacaccgcatcagtgcccggagtccaagcagagacgccag
gcacccaccaatttcacttctcgacacacacgcagagtcgtctaccccaaatacggaggg
gtcgatggaggctgttttgataggcatcttatcttcagcaggtttcggccgatctctgtg
ttcagggaggctgaggaggatgagagtggcttcatgtgctgtgcgttctctgcgcgagag
cgcttcctgatgttgggcacatgcactggacagctcaaactctacaatgtgttcagtgga
caggaggaagccagctacagctgccacagctcagccatcacgcacctggagccctccaga
gacggttccctgttgttaacctcagcttcctggagttatcctttatcagctctgtggggt
atgaagtccgtgttcatcatgaagcattcatttctggatgatcattatgtggagttcagc
aaactctctcaagacagagtcataggaacaaaagaacacatcgcacatatatatgacatt
cagaccggacagaaactcctgaccctcaacaaccctgacctagccaacaactacaagcgc
aactgtgccacgtttaaccccacggacgacctggtcctgaatgacggcgtcatgtgggac
gtccgcacctctcaggccatccataagtttgacaagttcaacatgaacatcagcggcgtt
ttccatcccaatggtttagaggtcatcatcaacaccgagatttgggatttgaggacgttt
catcttcttcacacagtaccagctctagatcagtgtcggattgtcttcaacaacaacgga
actgtcatttatggagccatgttgcaggccgatgatgaggatgatatgatggagcaacag
atgaagagtccattcggatcgtcctttaggacatttgatgccacagattataaacccatt
gccaccattgatgtgaagaggaacatttttgacctgtgcacagacactaaagactgctat
ctggctgtcattgagaatcaagattcaataaatatggacactgtgtgtcgcttgtatgaa
gtcggtcgccagagacttgctgaggaggaggaggatgaggaagatcaggaggaggatgat
caggatgaagaggacgacgacgactctgatgatgacatagacgacatcgataccgacccg
ctgctggccgagctggagaacgagaacaacggtgaggaagaggaggaggaggaggacggc
gagcaggatttctctccgtccgatgacgaagaagtggctcgtctgctggatgaagaggcg
gacgacgacgaggatgacgacgacgacgacgacgatgaagacgacgacgacgatgatgag
gattctgatgacaatgagagagatgtggagcttgtgctagacaacacagacagctctgat
aactcggacctggaagacgacatcatcctctccctgaacgagtga
DBGET
integrated database retrieval system
