Puntigrus tetrazona (Sumatra barb): 122337137
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Entry
122337137 CDS
T08985
Symbol
ubtf
Name
(RefSeq) LOW QUALITY PROTEIN: nucleolar transcription factor 1
KO
K09273
upstream-binding transcription factor
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122337137 (ubtf)
03021 Transcription machinery [BR:
ptet03021
]
122337137 (ubtf)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
UBF
122337137 (ubtf)
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
UBF
122337137 (ubtf)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_5
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122337137
NCBI-ProteinID:
XP_043089692
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Position
3:complement(20796493..20805936)
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AA seq
740 aa
AA seq
DB search
MNGEMDSTAKEPVWEQNDLLKLLDAMKGNLPDKDLAKYKTSESHLDWEKVAFNSYSGDMC
KQKWQEVSKEIRKFRTLTELIVDAQDYIKNPYKGKKLKKHPDFPKKPLTPYFRFFMEKRA
KYAKLHPEMSNLDLTKILSKKYKELPDRKKEKYVKDFVKEKETFMLSMMKFKQDHPDLVE
NVNKKSNIPEKPKTPQQLWYGHEKKAFLKAHPDATTKDIKDSLGKQWPQLSDKKRIKWIT
KSLEQKKLYEEKMREFIQQHPEMNLTEEDIVKSTLTKAERQLKDKFDGRPDKPPSNGYSM
FCAELMSSMKEVPSTERMVMCSQRWKLLKQNEKDAYQKRCEQKKKEYEVEMNRYLLSISK
EEQQRILSEQKMGSFKKGGGGSSPASKKNSKAKSSTEKPKPPVSAMFIFSEEKRPKLQQE
RPDLSDMELTRLLARMWNELSDKKKEKYKNLEVTLKAESEKQSKEDKGKLPETPKTAQDI
WQQSVIGDYLARFKNDRAKAQKAMEATWNTMEKKEKIMWIKKAAEDQKRYERELSEMRSP
APVFTLGKKMKFDGEPKKPPSNGYQKFSQEMLSNGELNHLPMKERMGEXGGRWQRLLQKE
KDRYKRLAEEKQRQYKVLLEQWLASLSSQERTAYKEYHSLKRRSTAKPGGTPAKAKPKAK
RSDEEEEEEAEEDDEDEEKESDDGSSSDDDSNDDDDDDDDEDEDDNEEDVEDEEVEDKEN
KSESSSSTSSSDDSSGSDSD
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagaaatggattccactgctaaagaacccgtttgggagcagaatgacctgttg
aagctgttggatgccatgaaggggaacctgccggacaaagatctggccaagtacaagacg
tccgagtctcatttggactgggagaaagtggctttcaactcttactctggggacatgtgc
aaacagaaatggcaggaagtttcaaaagagattcggaaattccggacccttactgagctg
atcgtggatgcgcaggactacatcaaaaatccatacaaaggaaaaaagctgaagaagcac
ccagacttccccaaaaagccattgacgccatatttccgtttctttatggagaagcgtgcc
aagtatgctaaactacatccagagatgagcaacctagatctcacaaaaatcctgtctaaa
aaatacaaggagctcccggatcgtaagaaagagaaatatgtcaaagactttgtcaaagaa
aaggagactttcatgcttagcatgatgaaattcaagcaagaccatcccgaccttgtggag
aatgttaacaagaagtccaatattccagagaagcccaagacaccccagcaactgtggtac
ggccacgagaagaaggctttcctcaaagcacacccagatgcgactaccaaagacataaag
gacagtcttggcaagcagtggccacagctctcagacaagaagaggataaagtggatcaca
aagtctttggagcagaagaaattgtatgaggagaagatgcgcgagttcatacagcagcac
ccagagatgaacttaacagaggaggacatcgtcaaatccactctgaccaaagcagagaga
cagctcaaagacaagtttgatgggcggccagacaaaccgccttctaatggttactctatg
ttctgtgctgagctgatgtccagtatgaaagaagttcccagtacagagcgtatggtcatg
tgcagccagcgatggaaactcctcaaacagaacgagaaagatgcctaccaaaagcgctgc
gagcagaaaaagaaagaatacgaagtcgagatgaatcgttacttattaagtatctcaaaa
gaggagcagcagagaatactatcagaacagaagatgggcagctttaaaaagggaggtgga
ggcagtagtcctgcttccaaaaagaactccaaagcaaagtccagtacagagaaacccaag
cctccggtctctgcaatgtttattttctctgaggagaagcgcccaaaacttcagcaggaa
aggcctgatctttctgacatggagctcaccagactactggcccgcatgtggaatgagctt
tctgacaagaagaaggaaaagtataaaaacctggaggtcacactgaaggcagagtctgaa
aaacagagtaaagaggacaaagggaaactaccggaaacgcccaaaacagctcaggatatc
tggcaacaaagtgtcattggagactatcttgcaagatttaagaatgatcgggcaaaagct
caaaaagccatggaagccacctggaacaccatggagaagaaagaaaagatcatgtggatc
aagaaggcagcagaggaccagaagagatatgaaagagagctgagcgagatgcgatcgcct
gccccagtcttcaccttagggaagaaaatgaaatttgatggtgaacccaagaaaccaccc
tcgaacggttatcagaagttctctcaggagatgctgtcgaacggagagctgaatcatctg
cccatgaaagagcgcatgggtgaanatgggggccgctggcagaggctccttcagaaagag
aaggaccgttacaaaaggctggcagaagagaaacagaggcagtacaaagtgctgctcgag
cagtggcttgcgagtttatcatcacaagagagaactgcttataaagaatatcattctctg
aaacggaggagcacagcaaaaccaggtggcacccctgctaaagcaaaacccaaggccaaa
cgatcggatgaggaagaggaggaggaggcggaggaggatgacgaggacgaagaaaaggaa
tctgatgacgggtcctcttccgatgatgacagcaacgatgacgacgacgacgacgatgat
gaagacgaagatgataatgaagaagacgtagaggacgaagaggttgaggataaagagaat
aagtcagaaagcagcagcagcacttccagctctgatgattcatcgggctcggactcggac
tga
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