Puntigrus tetrazona (Sumatra barb): 122338236
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Entry
122338236 CDS
T08985
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04010
MAPK signaling pathway
ptet04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122338236 (cacna1ha)
04020 Calcium signaling pathway
122338236 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122338236 (cacna1ha)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122338236 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
Motif
Other DBs
NCBI-GeneID:
122338236
NCBI-ProteinID:
XP_043089770
LinkDB
All DBs
Position
3:15368800..15455523
Genome browser
AA seq
2315 aa
AA seq
DB search
MTDGEGREHFHYLERGEVRVPISALYRAPGPSEEIGDDEEKSSTWIPVHESSQAQGSGAR
DPTPDLVSDEEEQPPYPALAPVVFFCIKQTTRPRSWCLRIVCNPWFEHVSMLVILLNCVT
LGMFQPCEDLECQSEWCVVLQVFDDCIFAFFAVEMVIKMIALGIFGSKCYLGDTWNRLDF
FIVMAGMMEYSLDGHNASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLL
CFFVFFIFGIVGVQLWAGLLRNRCFIPDNVKALYNLSHMTPYYMNEEGEDNPFICSSNKE
NGMLRCNEVPLLKEGAVECTLNASSLGHGLDGTGNSNSCVDWNQYYSECKPGEFNPHKGA
VNFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVI
ATQFSETKQRENQLMQEQRARYLSNDSTLASYSEPGSCYEEMLRYISHLYRKVKRRASRV
YSGWQSKRRKKVNPNSGLSGAGGAGGGGGGANGHSRHRGRGHWVRSIHNLIQQHQRQHCH
LSNGSPSPVTTSGPAEALEMRSITTGPQLTVSSQPTAMHNLSSRTQSVHSIYQGDFQEAP
QGRASTAVGVAALGRLNGGMNYPTILPSLICSYTGGSSAGKGRRESDANTGCDAIDPFEK
LHQLMGEHSHSQVLLQMAGVVPSPLLLELLSCPYCARALETMDVELGDSDYSRSDGDVVY
EFSHGAEFKPCRASHHKILEERNRLAQYWDDFRDRLIRIVDSKYFNRGIMIAILINTLSM
GIEYHEQPEELTNILEISNIVFTSMFVLEMLFKLLAFGIFGYIKNPYNIFDGIIVVISVW
EIIGQADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFS
ILGMHLFGCKFSMKMENGDTIPDRKNFDSLLWAIVTVFQILTQEDWNVVLYNGMASTTPW
AALYFVALMTFGNYVLFNLLVAILVEGFQAEGDANKSDVDEEKRSENFEEEEKMGELRAT
ELKMYSLMMSANGHVDPRGTLPPPIIMRTAATPMPTPKSSLGPESVFGLNESRRGSGISI
DPSAFDQKSLSSPRRSPCHPRGSGSNWGSRRSSWNSLGRAPSLKRKDTSGERESLLSGDG
RGSFEDEDLEGEKLANISGGSLQHPSSLDIPELHQTPSFSSLGDYHDCNGRSLHLPSDLS
ANLNKEDSIAEEDMDDSFCFRLKRTFEAYKPKWCKDHEEWSLYLFSPQNKFRVMCQRLIS
HKLFDHVVLVFIFLNCITIALERPSLPQSERKFLVISNYVFTVIFVAEMTVKVVALGFCA
GKQSYLQSTWNVLDGVLVSVSLIDILFSLAYSGGNRILGILRVLRLLRTLRPLRVISRAP
GLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGKFYHCEGGDTKNITNKSDCL
QANYKWIRRKYNFDNLGQALMSLFVLSCKDGWVNIMYDGLDAVGVDMQPERNHNPWMLLY
FISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREEKRQRLLEKKRRSKANCGSE
AQQRPYYADYSPARLYIHTLCTNHYLDLFITCIIGINVVTMSIEHFNQPRYLEDALKYCN
YVFTVVFIIEALLKLVAFGFRRFFKDRWNQLDLAIVLLSIMGITLEEIEMNAALPINPTI
IRIMRVLRIARVLKLLKMATGMRALLDTVMQALPQVGNLGLLFMLLFFIYAALGVELFGK
LDCKNYPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIMKDTLRECLPNEPSCFSYLPL
VSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIEMEMEMARRLSNVS
AGSSTGLEGRATYIGPHPDSPEQDEGMQRTQENLLSPRKMSVSRMHSLPNDSYMFRPVRP
ASAPFPLEEVEAIQGYLELGSITSVHSQPCESHSLLQVPGVPPHSQFNYLPKIPPPMPSP
THSIGRTLRRQEAFKNDSVDVQSFDSKDNPDRQEGISTGSFKLRVPRITGPSIPQGSPLL
PPRGHAPSVCTFQQPHSQHNIPSRSPSLASSSRSTSPSGSMFDSADPTDDEVRHINTTAR
LWVGIQAEARSHSLSPYSTSGMLLPIPVKNCSSAANLSIKDPKKCFSVDTEGFLEKPYGA
DDHRRHSIEICSSVDEGLFGQELSEKRHVPMRGQSLHIPRKKKMSPPCISIEPPFETMAP
ASLSSMKKLSESSMLLRRRTPSYDLALQRDSLDLPENQLSTQPLIKVERHPSHCAEYLSL
PHPNPMGGLAGTQPPPFDSRFEESTDFSSVNRTAQ
NT seq
6948 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagaacactttcattacttggagagaggagaggtaagagtt
cccatttcagccctgtaccgggcgccgggtcccagtgaggagatcggcgatgacgaggaa
aagagcagcacatggatccccgtccatgagagctctcaggcacaggggtccggggcccgg
gaccccactccggatttggtctcggatgaggaggagcagcccccctacccggcgcttgcg
cccgtggtgttcttctgcatcaaacagaccactcgtccacggagctggtgtctcaggatt
gtttgcaacccatggtttgagcatgtgagcatgctggtgattctgctgaactgtgtgact
ctgggcatgttccagccatgtgaggacctcgagtgccagtctgaatggtgtgtcgtccta
caggtgtttgatgactgcatcttcgccttctttgctgtggagatggtcatcaaaatgata
gccctggggatttttggatcaaagtgttaccttggtgacacatggaaccgtctggacttc
ttcatcgtcatggcagggatgatggagtattcactggatggtcataacgccagcctgtca
gccatccggactgtgcgagtgctcaggcccctgagagccatcaacagagtgcctagtatg
aggatactggtgactctgcttcttgatactctgcctatgttaggcaacgtcctcctgctg
tgcttttttgtcttctttatattcggcattgtcggggtgcagctgtgggctggacttctt
agaaatcggtgtttcataccagataacgtgaaagccctttataatctgtcacacatgact
ccatactacatgaatgaagaaggtgaggacaacccgttcatctgctcctccaataaggag
aatggcatgctgcgctgtaatgaggtgccccttctcaaggagggtgctgttgagtgcact
ttaaatgcatcctcactgggacatggcctggatgggacaggcaacagcaacagctgtgtt
gactggaaccagtattacagtgagtgtaagcccggggagttcaacccgcacaaaggggca
gtgaacttcgataatattggatatgcctggattgcgatattccaagttattactttggaa
ggatgggtggacatcatgtattacgttatggatgcccactccttttacaattttatatat
tttatattgcttattatagtgggttccttcttcatgatcaacctgtgcctggttgtaata
gcaacccagttctcagaaacaaagcagcgcgagaaccagctgatgcaggagcagcgagca
cgctacctctccaacgacagcaccctcgccagctactctgagccagggagctgctacgag
gagatgctcaggtacatcagccacctgtaccgcaaggtgaagcggcgtgcttcccgcgtc
tacagcggctggcagagcaagcgcagaaagaaggtgaaccccaacagcgggctgagtggg
gcaggaggagcaggaggcggaggcggaggggccaatggccacagcaggcacaggggtcga
ggacactgggttcgctccatccacaacctcatccaacagcaccaacgacagcactgtcac
ctcagcaacggcagccctagtcctgtaaccacttcggggcccgcagaggctctggaaatg
aggtccatcactacggggccgcaactgaccgtgtcctcacagccaaccgccatgcacaat
ctctcttccaggactcagtcagtgcacagcatttatcaaggtgactttcaggaggccccg
caagggcgagcgagcaccgctgtgggtgtggcagcgctcgggcgactaaacggcgggatg
aattatcccaccatcttgccctccctcatttgcagctatactggcggcagttctgcaggg
aaaggaaggagggagtcggatgcaaatacgggatgtgatgcgattgatccctttgagaag
ctgcaccagctcatgggagaacatagccacagtcaggtgctgctgcagatggctggtgtg
gtgcccagtccattgcttctcgagctcctgagctgcccgtattgtgcaagggccctggag
accatggacgtggagctcggagattcagactactccagatcagatggggatgtggtttac
gagttctcccatggagcggagttcaaaccctgccgtgcgtcccatcataaaatcctggag
gagcgtaaccggctggctcagtactgggatgacttccgggacagattgatacgcatagtg
gatagcaaatacttcaatcgaggaattatgattgccatcctcatcaacaccttgagtatg
gggattgaataccatgagcagcctgaggagctgacaaacattctggagattagcaacatc
gtcttcactagcatgtttgtcctcgaaatgctcttcaaactgctggcctttggcatcttt
ggctatatcaagaacccctacaacatctttgatgggattattgtagtcataagtgtgtgg
gagatcataggacaggcggatgggggtctttcagtgctgaggacgtttcgtctcctgcgt
gtgctcaaactggtgcgcttcctccctgctctgcgcagacagctggtggtcctgatgaag
accatggacaatgtggctacattctgcatgctgctcatgcttttcatctttacatttagc
attcttggaatgcatctttttggatgcaaattcagcatgaaaatggagaatggagacact
attccggacaggaaaaactttgattccctgctgtgggccattgtcactgtgtttcagatc
ctgacccaggaagactggaacgtggtcctctataatggaatggcttccaccaccccatgg
gcggctctttactttgtggctctgatgacttttgggaattatgtgctctttaacctactg
gtggccatcttagtggagggatttcaggcagagggggacgctaacaagtcagatgtggat
gaggaaaagcgctcggagaactttgaagaggaagagaagatgggggaactacgagctaca
gagctgaagatgtactctctgatgatgtcagcgaatgggcatgtggatcctcgaggcact
ttaccccctcctatcatcatgcgcacggctgccacccccatgcccactcccaagagctca
ctcggccccgagtcagtgtttggtttaaacgagtccaggcggggcagtggcatctcaata
gatccaagtgcttttgatcaaaaatccctgtctagcccaagaaggtctccatgccacccc
cgtggctcaggcagtaactggggcagccgcaggtcaagctggaacagcttaggacgggcg
ccgagtttgaaaaggaaagacacgtctggggagagagagtctctgctgtctggagatggc
cggggcagctttgaggacgaagacttagagggggagaagctggccaatatcagtggaggc
tcactgcagcatcccagctctctagatatccctgagctgcaccaaacccccagcttcagc
tcactgggagactaccacgactgcaatggaagaagcctgcacctgcccagcgacctgtcc
gccaacctcaacaaagaagactccatcgcagaggaggacatggatgacagcttctgtttc
cgtctcaagagaacttttgaggcatataaacctaagtggtgtaaagaccatgaagagtgg
tccctttacctgttctctcctcagaacaagtttcgggtgatgtgtcaaaggttaatttct
cacaagctgtttgatcatgtagtcttggtattcatcttcctaaactgcattaccattgct
ctggaaagaccctctcttccgcaatccgagcgaaagtttctcgttatctccaattatgtt
ttcactgtgatttttgttgctgaaatgactgtgaaggtggtggccctcggcttctgcgcc
gggaagcaaagttatctgcagagcacctggaatgttctggatggggtgctggtctctgtc
tctctcattgacattctgttctccctggcctactctggtggaaaccgaatccttggcatc
ctgagggttcttcgtctgctgagaactctgcggccactgagagtgattagtcgtgctcct
ggactgaagctggtggtggaaactctaataacgtccctgaggcccattgggaacattgtg
ctgatctgctgtgccttctttattgtctttggcattcttggagttcagctcttcaaagga
aagttttaccattgtgaaggtggcgacaccaaaaacatcaccaataagtctgattgtctt
caagcaaactacaaatggattcggagaaaatacaactttgacaacttgggacaggctctc
atgtcgctgttcgtactttcttgtaaggacggctgggtcaatataatgtatgacgggttg
gacgctgttggggtggacatgcagcctgagcgcaatcacaacccctggatgctcctctac
ttcatctctttcctgctgatcgtcagcttctttgtgttgaacatgtttgtgggagtggtg
gtggagaacttccacaagtgtcgccaggaccaggaggaagaggaggcacgtctgcgtgag
gagaagaggcagagactgctggagaaaaagcgcaggagtaaggcgaattgcgggtctgag
gcccagcagagaccatactatgcagattactctccggcccggctctacatccacacactg
tgtaccaaccactacctggacctcttcatcacctgcatcatcggcatcaatgtggtcact
atgtctattgagcatttcaaccagcctcgctaccttgaagatgcactgaaatactgtaac
tatgtctttaccgtcgtcttcataattgaggctttgctcaagcttgtggcatttggtttt
cggagattcttcaaagacagatggaaccagctggatctagccatagtcctgctttctatc
atgggcataaccctggaggagattgagatgaacgcagcactgccaatcaaccccaccatc
attcgcattatgagagtgctgaggatagccagagtactgaagcttttgaagatggctaca
ggcatgagagcactgctagacactgttatgcaagctttaccacaggtgggaaatctgggc
ttgctgtttatgctcctcttcttcatttatgcggcacttggcgtggagctttttgggaaa
ctagattgcaaaaactacccatgcgaaggattaagcagacatgctacatttgaaaatttc
ggtatggcctttttaacattattcagagtatcgacgggggacaactggaatggcataatg
aaggacactctgagagagtgccttccaaatgaacctagctgcttcagctatctgcccctg
gtttcccccatctacttcgtcacctttgtgctaatggctcagtttgtgctggttaacgtg
gtggtggccgtactgatgaaacacctggaggagagcaataaggaggctaaagaagatgca
gaaatggacgctgagattgagatggagatggaaatggctcgccgtctcagcaatgtctca
gcagggagctctacagggctggaaggaagagcaacttatataggaccacacccggattca
cctgaacaggatgaagggatgcaaagaacacaggagaatttgctctctccacggaaaatg
tcagtgtcaaggatgcactctttgcccaatgacagctacatgtttcgccctgtgaggcca
gccagtgctccttttccactagaagaagtggaagccattcaagggtaccttgaattaggc
tctatcacctcagtccactctcagccatgcgaaagccattccctgctccaggtccccggt
gttcctccccattcccagttcaactacctccccaagatcccccctcccatgccctctcca
acccacagcataggcaggactttacgcagacaggaggcttttaaaaatgactccgtcgat
gtgcagagttttgactccaaagacaatcccgacagacaggaaggaatatctacaggcagc
ttcaagctgcgtgtccctcgaatcacaggacccagcatccctcaggggtcacccttgctg
cccccacgtggacatgcccccagtgtctgcaccttccagcagccccacagccagcacaat
atcccttctcgatctcccagcctggccagcagcagcaggagcaccagccccagtggctcc
atgttcgactctgccgacccgactgacgatgaggtccgccacatcaacactacagcacga
ctgtgggtagggattcaggctgaagcccggagtcactccctgtctccttacagcacctca
gggatgctgcttcccatccccgtgaagaactgcagcagtgctgccaacttaagcatcaaa
gatccgaagaagtgcttcagtgtggacacagagggttttctggaaaaaccctatggtgcc
gatgaccatcgcaggcactcaattgagatttgctcgtcagtagatgaagggctgtttggc
caagaactcagtgagaagaggcacgttcccatgcgtggacagtcattacacattccccgg
aagaaaaagatgagtcctccctgtatctccatcgagcccccgtttgaaacgatggctccc
gcttctctctcatccatgaaaaagttgtcggagagcagcatgctactacggaggaggacg
ccatcctatgacctggccctgcagcgggactctctggatttgccggagaaccagctgtcc
acccagccgcttatcaaagtagagcggcacccctctcactgtgccgagtatctgtccctg
cctcatcccaacccaatgggtggactagcaggcacacagccgccccccttcgacagccgg
tttgaagaatccacggacttcagctctgtaaacaggacagcccaatga
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integrated database retrieval system
