Puntigrus tetrazona (Sumatra barb): 122340335
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Entry
122340335 CDS
T08985
Symbol
usp43b
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43 isoform X1
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122340335 (usp43b)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122340335 (usp43b)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122340335 (usp43b)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
122340335 (usp43b)
Ubiquitin system [BR:
ptet04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122340335 (usp43b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
122340335
NCBI-ProteinID:
XP_043089954
LinkDB
All DBs
Position
3:complement(23906933..23962751)
Genome browser
AA seq
1168 aa
AA seq
DB search
MDKRDKKAKKDSGKSAKRTGKLFRRKSFKSVESLVSKILKSLGSLANGGEATERSGAEDD
DGGFGESAPCAGNSGRDRKEDGGQVRKSCSLPCRSSAKERLFTLYGDKTPGVLGLKNHGN
TCFMNAVVQCLSNTDLLAEYLCLERYKLDLCRRGVNGFIKNENGQQEKGEVTERLATLVR
ALWTLQYTPQLSAEFKMTVSKYGAQFRGNSQHDALEFLLWLLDRLHEDVNSSSALPNGNN
RSKSSGKGQEGGDEKPVSDTPPQTQPGVCHSFVQEHFQAQYKSSLTCPHCLKQSNTFDPF
LCISLPIPLRQTRPVCVTLVFSSKGQRYLRVGLAVPLFGSLACLRRMVADEGKISPDQVI
LTEIYTTGFQRSFFDDDDLTSIAESDIIYAFQAPPLYIRGGSARISGLHHSLPSSPYTSS
GPEGHRLAASGALSSEFLNQAEGMAKILLLVCNAARSGQQAVRFGPPFLMREDRSVSWEQ
LQQSILSKLYYLMINGSQAHNFRVLFKIRVVGGSAAYSYLNPQDGRPLYHPAVDRALKLC
GSGGPPHVKLIVEWENRIKDCLFGNIQEEVVKDSESVRAQQQHHVQQHSCTLDECFELYT
KEEQLAPDDAWKCPHCKQLQQGTVQMSLWTLPDILILHLKRFRQVGERRNKLSTLVHFPL
TGLDMGRHMVKRSNCARPPPGWKQQAHQRPDAGRHTPTFLYDLYAVCNHHGGMHGGHYTA
YCRNSVDGQWYAYDDSSVEPVCEAEVCTRGAYILFYQRRDAIPPWSASCSLQGSSTSDHW
LIRLNTDKPISNSSSKLSNSSSAPEPQTPHLPIVREPQNEDNDVVEPAPFVRSVRGHSMS
MRYQSKSKTGPSKVLPLRWSFASKDRRKPSSVAPQSGNDELVEYLESGRRPRCTKEPIVS
IVASPSQVKAHPREDDSLSSPSCSSSVERCSYQGPDSPRLPEGQSRPTSDLNGITSDNSL
AKNSSKTRQEHERTQASKSLQGSPSALSNGTGNSASYSRDSTLKRLRNQPAATSRTHPSQ
TQAATGESRSKDGVVISTVQLQDKEVVPRKTLSSKSLTKLSLSNGTLNGKGIEVRKSGTA
HKSASKAVNGRESQVCSNTADIKRAHSSSNIQSRLDMTLKRTLSLQRNGPLVPAPNKGPD
KSSYATLQKIRYSSTSLGRQRPVPESCF
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atggataaacgcgacaagaaagcgaaaaaggattcggggaagtctgcgaaacgcacgggc
aagctgttccggaggaaatcgttcaaatccgtggaaagtttggtgagtaagatcctgaaa
agtttggggagcttggccaacggcggagaagcgaccgaacgctcgggtgccgaggacgat
gacggtggcttcggggaaagcgcaccttgcgcgggaaactcgggacgtgacaggaaagag
gacggcggccaggtgaggaaaagttgctctcttccctgccgttcctccgcgaaagagcga
ctgttcacgctgtacggggataaaacgcccggagtgctgggtctgaagaaccacgggaac
acctgcttcatgaacgccgtcgtgcagtgcttgagcaacacggacctgctcgccgagtat
ctgtgtctggagcgatataaactggatctgtgtcgcaggggagtgaacgggtttataaag
aatgagaacggtcagcaggagaagggagaggtcacggaacgcctcgcgactttggtccga
gcgctttggactttgcaatacacccctcaactctcggctgagtttaagatgacggtatct
aaatacggtgctcagttccgtgggaattcccagcatgacgctcttgaattcctgctctgg
cttctggaccgcctccatgaggacgtcaactcatcttcagccctccccaatgggaataac
agaagcaaatcaagtggcaagggtcaagaaggaggtgatgaaaagcctgtctctgacacc
ccgccacagacgcagcctggtgtatgtcacagctttgtacaagaacacttccaggcacaa
tataagtcatctctgacatgcccacattgtcttaagcagagcaacacgtttgatcctttt
ctgtgtatttccctccctattcctctaagacagacgagaccagtgtgtgtgactttggtg
tttagcagtaaagggcagcggtatctgagagtggggctcgctgtgcctctcttcggctct
ttggcttgtctgcgccggatggtggcagatgagggcaagatctctcctgatcaggtaata
ttgacagagatctacacaacaggtttccagcgctccttctttgatgacgatgacttgacc
agcatagcagagagtgacatcatctatgccttccaagctccgcccctttacatcaggggt
ggatctgctcgaatctcagggttgcaccacagtcttccgtcctctccgtacacttcgtct
gggccggaggggcacagactggctgcgtccggagcgctgtcctccgagttcctgaaccag
gccgaggggatggcgaagatcctgctgctggtgtgtaatgcagccagatcaggacagcag
gcagtgagattcggtcctccatttctgatgagagaggacaggtccgtgtcgtgggagcag
ctacagcagagcatcctcagcaaactctactacctaatgatcaatggctcacaggcacac
aatttcagggtgttattcaagattcgtgttgttgggggatctgcagcttatagctattta
aatccccaagacggacggccgctttatcaccctgctgtggacagagctctaaagctgtgc
ggctcaggtggaccgccgcatgtgaagctcattgtcgagtgggagaacagaatcaaagac
tgcctgtttggtaacatccaagaggaggtggtgaaggactcggaaagtgttcgtgctcaa
caacaacaccacgttcaacagcacagctgcaccctggatgagtgctttgagctctacacc
aaagaagaacaactggcccctgacgacgcgtggaagtgtcctcactgtaagcagctgcag
cagggcactgtgcagatgagcctgtggacgctcccagacatcctcatccttcacctcaag
cgcttcagacaggtgggagagcgccgtaacaagctctccacgctggtgcacttccccctc
actggcctcgatatgggacgccacatggtcaagaggagcaactgtgcccgaccgccgcca
ggctggaaacaacaggcccatcagcggcccgacgccggccgacacactccgaccttcctg
tacgacctgtacgcggtgtgtaaccatcacggaggcatgcatggaggccattacacagcg
tactgcaggaactcggtggacggtcagtggtatgcgtacgatgacagcagtgttgagccg
gtgtgtgaggcagaagtgtgcacacgcggtgcttatatcctcttctatcagagacgagat
gccatcccaccctggtcagctagctgctcgctgcaaggctcctctacctcagaccactgg
ctcatccggctaaacacagacaagccaatttctaattcaagcagcaagctgtccaattca
tcttcagcaccagagccccaaacaccacaccttcctatcgtccgtgagcctcaaaatgaa
gacaatgatgtagttgagccagcgccgtttgtacgaagcgtccggggccacagtatgagt
atgcgctaccagtccaaatccaagacgggcccaagcaaagttcttccactgcgctggtca
tttgcttccaaggaccgcagaaagccctccagcgtcgctccacaaagcggaaacgacgag
ttggtggagtacctcgagtccggccggcggccacgatgcaccaaggagcccatagtaagc
atcgtggctagtccttcacaggtcaaagcccaccctcgcgaggacgattctctgagttcc
ccgagctgcagcagtagcgtggagcgatgtagctatcaaggtccggattcccccagactg
cccgaaggccagagcagaccaacctcggatctcaacggcattacatccgacaactcgttg
gccaaaaacagttcaaaaaccaggcaggagcacgaaaggactcaagccagcaagtctctt
caaggttctcctagtgcgctctccaatggtaccggcaacagtgcatcttattccagagac
tccacgttaaaacggctacgtaaccagccggctgcgactagcaggactcatcccagccag
acgcaggcagccacgggggaaagcaggagtaaagacggcgtcgtcatcagcaccgtccaa
ctgcaggataaggaggtagttcccaggaaaacgctttccagcaagagcttgaccaaactg
tcactatccaacgggactctaaatggaaagggaattgaggtgaggaaatccggcaccgct
cacaagagcgccagtaaagcggttaacggcagagaaagtcaggtttgttcgaacacagct
gatataaaacgcgcccacagctcatctaatattcagagcaggctagatatgactttgaaa
aggacgttgtctctccaaagaaacggtccgttggtgccggctcccaataaaggaccagat
aaatcctcctatgcaacgcttcagaaaatcagatacagcagcacttcgctcggcagacag
agacccgtacccgagtcctgcttctga
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integrated database retrieval system
