Puntigrus tetrazona (Sumatra barb): 122340515
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Entry
122340515 CDS
T08985
Symbol
abca3b
Name
(RefSeq) LOW QUALITY PROTEIN: phospholipid-transporting ATPase ABCA3
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122340515 (abca3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122340515 (abca3b)
Transporters [BR:
ptet02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
122340515 (abca3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane_3
ABC_tran
R1_ABCA1
AAA_21
AAA_15
AAA_23
RsgA_GTPase
AAA_22
SRP54
Cas6_I-A
AAA_29
Motif
Other DBs
NCBI-GeneID:
122340515
NCBI-ProteinID:
XP_043090009
LinkDB
All DBs
Position
3:complement(4038547..4077723)
Genome browser
AA seq
1708 aa
AA seq
DB search
MAVWQQFGLLLWKNYIQQKRQILVTLVEIALPLLFSAILIVLRQKVSSINYPNATHYHSF
ALSELPYPLCFQDLQLAYVPANASVVRQISEDVQQSLRECIRTVRGFETEEQFEEFVKTD
PESGKVLAAIVFEHQFTRDDEPLPLQVSYHLRFTYSPRNAPAREKSELNPNNDLDWHTLS
LFPLIQLPGPREQHEPRGGTPGYYREGFLQVQHAVDRAIMKAYNSTAAAALLKRAQVLLA
RFPYPAFIYDVFILAIQNQLPLLLVLSFTYTSLNIVRAVVQEKERKLKEYMRMMGLSNWL
HWSAWFLMFFLFLCISIFFVTVLICVKVSPNGAVLTYSDPTLVFVFLLVFAVSTINFSFM
ISSFFSRANVAAAAGGFIYFLSYLPYVFLWPRYDLLSHAQKVSACLISNVAMAMGAQLIG
MFEGKGTGVRWSNLFEPVTVDDDFSLAQVLGLLLLDSLLYALVAWYVEAVFPGEYGVPRP
WYFFILPSYWCSSPRVALLKEKEEEEEAEKVTKGEFIEEEPAGLVSGVKIKHLAKVFKVG
NKTKEAVRDLTLNMFEGQITVLLGHNGAGKTTTLSMLTGLFPPSSGRAYINGYDICQDMA
LIRRSLGLCPQHDVLFDNLTVREHLLFYTQLKGYPREKIPXEVDRILRVLNLEDKCHARS
KTLSGGMKRKLSIGIALIGDSKVVMLDEPTSGMDPSARRATWDLLQGEKRGRTILLTTHF
MDEADLLGDRIAIMASGELQCCGSPLFLKNKYGAGYHMVIVKDAFCNMSEITRLVHMYVP
DATLESSAGAELSYILPKESTSRFELLFAELEMNRDELGIASYGASVTTMEEVFLRVGKL
VDSSLDIQAIQLPALQYQHERRSHDWTMDDSSSISGMTDVTDFTDSGTMISEDGSNIKLN
IGARLYMQQFYAMFLKRALYSWRNWKVMVAQFLVPLIFTVLALVVARTLPGSQITPMLRL
ALKQYGPTRVPVAVDVNAGPLAAALAEMYTAQLPSQNAVGATNITDLSEYVLYNALREGG
AFNEHCVVGATFRSRSRKSAEVVGYFNNQGYHTPAAALMLVDNALYKLLAGPDASIQTGN
YPMPRNMSETAQSQLSEGQTGFAIAINLMYGMASLASTFALLLVSERSVKSKHVQQVSGV
YLSNFWFSALLWDLINFLLPCLLMLVVFRVFSVKAFVAENHLVDVLLLLLLYGWAVIPLM
YLLSFLFSTAAAAYTRLTIFNILSGTATFLAVTIMTIPELKLVDMSHLLDKIFLIFPNYC
LGMSFSEFYQNYETITFCTSSAFAEFICKYYNITYQVNYFSMDEPGVGRFLVAMSLQGVV
FIALLFLIELRCVHILLNICRRRKKALLLAEEALQPEDRDVAEERKRVLECQPVVESMVG
SPLILQELSKVYSGGQSLLAVDRLSLAVGKGECFGLLGFNGAGKTTTFKMLTGDESITSG
DAFIDGYSILRDVKKVQQRIGYCPQFDAVLDHMTGRETLSMYARLRGIPEKYVTACVENV
LRSLLLEPHADKLVRSYSGGNKRKLSAGMALIGGPPVIFLDEPSTGMDPVARRLLWDAIT
RTRESGKAIIITSHSMEECEALCTRLAVMVNGQFKCLGSPQHLKSKFGSGYTLLAKVRVE
TELEEMDLQLFKDFIESTFPGSLLKDEHQGMVHYHLTDKTLTWAQVFGVLETAKEKYNIE
DYCVSQISLEQVFLSFAQFQHCAEACRK
NT seq
5127 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgtggcagcagtttggactgcttctgtggaagaactacattcagcaaaagcgt
cagatcctggtcactctggtggagatcgctctgccgctgctcttctctgctatcctgatc
gtcctgaggcagaaggtgtcgtccatcaactaccccaatgccacgcactaccacagcttc
gctctgagcgagctgccgtaccctctgtgcttccaggacctgcagctggcctacgtccct
gccaacgccagcgtggtgcggcagatctcggaggacgtgcagcagagcctgcgggagtgc
atccgaaccgtgcgtggcttcgaaacagaggagcagtttgaggagttcgtgaaaactgac
ccagagtcaggcaaggtcttggcagccatcgtgtttgagcaccagttcacacgcgacgac
gagccgcttcctcttcaggtcagctatcatctgcgcttcacgtacagccccagaaacgct
ccggcgcgtgagaagtccgagctcaaccccaacaacgacctggactggcacacgctcagt
ctgttcccgctgatccagctgcccgggcccagagagcagcacgagccacgcgggggcacc
ccaggatattaccgcgagggcttccttcaggtgcagcacgcggtggaccgggccatcatg
aaggcctacaacagcacggcggcggcggccctcctcaagcgagcccaggtgctgctggcc
cgcttcccttacccagcgttcatctacgacgtcttcatcctggccatccagaaccagctt
cccctgcttctggtgctcagcttcacatacacctctctgaacatcgtccgcgccgtggtg
caggagaaggagaggaagctgaaggagtacatgcgcatgatgggcctcagtaactggttg
cactggagcgcctggttcctcatgtttttcctcttcctctgcatctccatcttctttgtt
accgtacttatctgcgtcaaggtgagtcctaacggggcggtgttgacctacagcgacccc
acgctggtgttcgtcttcctgctggtgttcgccgtgtccaccatcaacttcagcttcatg
atcagctccttcttctccagagcgaatgtggcggcggcggcgggcggcttcatctacttc
ctgagctacctgccgtacgtcttcctgtggccccgctacgacctgctctcgcacgcacag
aaagtctccgcctgcctcatctccaacgtggccatggccatgggagcccagctgatcggc
atgttcgagggcaaagggacgggcgtccggtggagcaacctgtttgagccggtgacggtg
gacgatgacttctctctggcgcaggtgctgggtctgctgctgctggactcgctgctgtac
gctctggtggcctggtacgtggaggccgtgtttcccggggaatacggagtgcctcggccg
tggtacttcttcatcctgccctcgtactggtgcagcagccctcgcgtggccctgctgaag
gagaaggaggaagaggaggaggccgagaaggtgacgaagggcgagttcatcgaagaggag
ccagctggactggtctcgggggtcaagatcaaacatttggcaaaggtgttcaaagtggga
aataagaccaaggaggcggtgagggatttgacgctcaacatgttcgaaggccagatcact
gtcctgctgggtcacaacggagcgggaaagaccaccacgctgtcaatgctcacaggcctc
ttcccgcccagcagcggccgtgcgtacattaacggttacgacatatgtcaggacatggct
ctgatccgccgcagcctgggtctgtgtccgcagcacgacgtgctcttcgacaacctcacc
gtccgggaacacctgctcttctacacgcagctgaagggttatcctcgtgaaaagatccct
ngcgaagtggaccgcatccttcgggtcctgaatttggaggacaaatgtcatgcgcgatct
aaaaccctctctggcgggatgaagaggaagctttccatcggcatcgctttaatcggagac
tcaaaggtggtgatgctggacgagcccacctcaggaatggacccctcggcccgccgggcc
acctgggacctgctgcagggcgagaagcggggccgcaccatcctgctcaccacacacttc
atggatgaggccgacctgctgggagatcggatcgccatcatggccagcggagagctgcag
tgctgcggctcgccgctcttcctcaagaacaaatacggtgctggttaccacatggttata
gtaaaggatgcgttttgtaacatgtccgagatcacccgtctagtgcacatgtacgtgccc
gacgccactctcgagagcagtgcgggcgctgaactctcctacatcctgcccaaagagagc
accagccggtttgagctgctgtttgctgagctggagatgaatcgggacgagttgggcatc
gccagctacggggcgtctgttaccactatggaggaggttttcctcagggtcgggaagctg
gtggactccagtctggatatccaggccatccagcttccggctctgcagtatcagcacgag
cggcggtcgcatgactggaccatggacgactccagcagcatcagcggcatgacggacgtg
acggatttcaccgacagcggcaccatgatctcggaggacggctccaacatcaaactcaac
atcggggcccggctctatatgcagcagttctacgctatgttcctgaagagggcgctctac
agctggcgcaactggaaggtgatggtggctcagtttctggtgccgctcatcttcacggtc
ttggctctcgtagtggcccgcaccctcccgggaagccagatcacgcccatgctccgtctg
gcgttaaaacagtacggccctactcgcgtccccgtggccgtagacgtcaatgccgggccg
ctggctgcagctctggctgagatgtacaccgcgcagctgccttcccagaacgccgttggt
gccactaacataacagatttgtcggagtacgtgctatataacgccttgagggagggcggg
gctttcaatgagcactgcgtggtgggcgccaccttcaggagccgatccaggaagagcgca
gaggtcgtcggctacttcaacaaccagggctatcacacccccgccgccgctctcatgctg
gtggacaacgctctctacaaactactagctggacccgacgcctccatccagaccggaaat
taccccatgccccgcaacatgtctgagacggcccagagccagctttcggagggtcagacg
ggttttgccatcgccataaacctcatgtacggcatggcatcattagccagcaccttcgcc
ctgctcctcgtctccgagcgatcggtcaagtccaaacatgtgcagcaagtcagcggggtc
tacctctccaacttctggttctccgccctgctgtgggacctcatcaacttcctgttgccc
tgcctgcttatgctggtggtcttccgagtgttttcagtgaaagcgtttgtggccgagaat
cacctggtggacgttctgcttcttctgctactgtacggctgggcggtgattcccctcatg
tacctgctcagcttcctgttttccacggccgctgccgcctacacgcgcctcaccatcttc
aacatcctcagcggcacggccaccttcctcgccgtcaccatcatgaccatacctgagctg
aagctcgtagacatgtctcatctcctggataagatcttcctgatcttcccaaattactgc
ttgggcatgtccttcagcgagttctaccagaactatgagaccatcaccttctgcacctcc
agcgcctttgccgagttcatttgcaagtactacaacatcacgtatcaagtgaactacttt
tccatggatgagcccggagtgggccgcttcctggtggccatgtccctacaaggtgtggtc
ttcatcgccctgcttttcctcatcgagctccggtgcgtccacatactgctcaacatctgc
aggagacgcaagaaggctttgctgttggcggaagaagctctccagcccgaggacagagat
gttgcggaggagaggaagagggttttggagtgccagccggtggttgagtcaatggtgggc
agcccgcttatactacaggagctcagcaaggtatattcaggcgggcagtcgctgttagcg
gtggaccgtctgtctttggctgttgggaagggcgagtgctttggtttactgggatttaac
ggagcagggaagactacgacgttcaaaatgctgacgggagatgaaagcataacctcagga
gatgccttcattgatggctacagcatcctccgggatgtgaaaaaggtgcagcagagaatt
ggttactgtccccagtttgacgcggtgctagatcacatgacagggcgggaaaccctgagc
atgtacgccagactgaggggcatcccggagaaatatgtcacagcctgtgtagaaaacgtc
ctgcgttcgctgctgctcgaacctcatgctgacaaacttgtccgcagctacagtggcggc
aataagaggaagttgagtgcaggcatggctctgatcggtgggccgcccgtgatcttccta
gacgagccgtccaccggcatggaccccgtggccagacggctgctgtgggacgccatcaca
cgcaccagagagtctggcaaagccatcatcataacctcacacagtatggaggagtgcgag
gcgctgtgcacgcggctggctgtgatggtgaacggccagttcaagtgtctgggcagcccg
cagcacctcaagagcaagtttgggagcggatacacgctgctggccaaggtccgcgtggag
acggagttagaggagatggaccttcagctcttcaaagacttcattgaaagcaccttccca
ggaagtttactgaaggatgaacaccaggggatggtccactatcacctgactgacaaaact
ctcacctgggcacaggtgtttggtgttttagaaacggccaaagagaagtacaacatcgag
gactactgcgtgagccagatctcgctggagcaggtgttcctcagcttcgctcagttccag
cactgcgccgaagcctgcaggaaatga
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integrated database retrieval system
