Puntigrus tetrazona (Sumatra barb): 122340541
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Entry
122340541 CDS
T08985
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog isoform X1
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122340541 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122340541 (utp18)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122340541 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40
WD40_CDC20-Fz
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_HPS5
NBCH_WD40
Beta-prop_WDR19_1st
Beta-prop_EML
WD40_RFWD3
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
KNTC1_N
Beta-prop_VPS8
Beta-prop_TEP1_C
Beta-prop_SPT8
DUF7165
Beta-prop_NWD2_C
DUF4764
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
122340541
NCBI-ProteinID:
XP_043090037
LinkDB
All DBs
Position
Unknown
AA seq
525 aa
AA seq
DB search
MTAPESSVKKQLKAAKRPRVEEPEPDPDRSAAEEREQQQKHAALCETLRGEDASVRLLEE
LVFGAEERLAERLTDSSVFLEDEDVLSVCSEDSGSERGTQPGVRSAVWEDEDDEREEEID
MTHRFRRDFKKSEAENKMTKQRLQQRLKEQFQKTMGGTPSWAEATAQKRQKTAEHESEDE
DERGDLLRRTGNFIGSSDSLPKGIIKMKKCVNVNSECPGGDQLTSVQFHPSAQIAMTAGL
DHSVSLFQVDGKTNPKIQTIHLEKFPVSKALFSADGESLVATGLRNKLFYIYDMLEGRVV
PVSCVRGLNEQKVSDFQVSPDGKYLLLSGSSGYLHLMTTKTREIIRSMKLNGNVCSAAFT
SDSSKIFSSSQEGEVFIWDVQSSKCLKRFEDDGCVRGTSLALCRNDQYLACGSQSGVVNI
YSQQDCLQKQKPKPLKAVMNLLTSISSLCFNSTSEILAIGSRADNEANRLVHLPSFKVFS
NFPHVQKKNIFQTQCLDFSPRSGFYSVANNKGHALLFRLLHYTEF
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgactgcgcccgagtcctccgtcaagaagcagctgaaggcggcgaagaggccgcgggtc
gaggaaccggaaccggacccggaccggagcgcggcggaggagcgcgagcagcagcagaag
cacgcggcgctatgcgagacgctccgcggggaggacgcgtcagtgcggctgctggaggag
ctggtgttcggcgccgaggagcggctcgcggagcgtctcacggacagcagcgtgttcctg
gaggacgaggacgtcctgagtgtgtgttcagaggacagcggctccgagagagggactcag
ccgggggtccggagcgcagtatgggaggatgaggatgatgagcgggaggaagagatcgac
atgacgcatcgcttccgcagagactttaaaaagagtgaagcggagaataaaatgacaaaa
cagaggctgcagcagcgcctgaaggaacagtttcagaaaaccatgggcggcacgcccagc
tgggcagaagccacagcgcagaagagacagaagacagcagagcacgagagtgaagacgag
gatgagagaggagatctgttgaggaggacggggaacttcatcggctcgtctgacagcctg
cccaagggaatcattaagatgaagaagtgtgtgaatgtgaacagtgagtgtcccggcggc
gatcagctgacctccgttcagtttcacccgtctgctcagatcgccatgaccgcgggcctg
gaccactccgtatcgctcttccaggtggatggaaagaccaacccgaagatccagaccatc
catctggagaagtttccagtgagcaaggccttgtttagcgctgatggggagagtttagtg
gccactggactgaggaacaagctcttctacatctatgacatgttggagggccgagtcgtg
cctgtgtcctgtgtgagaggtctgaatgagcagaaggtgtcagacttccaggtttctccg
gatgggaagtatcttctcctctcaggatcttcaggatatctccatctcatgaccacaaag
accagagagatcatccggagcatgaagttgaacgggaatgtatgttctgcagcattcacc
tcagacagcagcaagatcttctctagctcccaggaaggcgaggtgttcatctgggacgtg
cagagcagtaaatgtctgaagaggtttgaggatgacggctgtgttagaggaacttctctg
gctctgtgcaggaatgaccagtatctggcctgtgggtctcagagcggcgtggtcaacatc
tactcccagcaggactgtcttcagaagcagaagcccaagcctctgaaggccgtcatgaac
ctgctgaccagcatcagctccctgtgcttcaacagcacctctgagatcctggccatcggc
tccagagcagacaacgaggccaaccgactggtccatcttccaagttttaaagtgttctcc
aattttccacacgttcaaaagaagaatatatttcaaacccagtgtctagatttctccccg
cggagcggcttctactcggtggccaataataaaggccatgctctgctcttcaggcttctg
cattatactgaattctag
DBGET
integrated database retrieval system
