Puntigrus tetrazona (Sumatra barb): 122341229
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Entry
122341229 CDS
T08985
Symbol
dcaf7
Name
(RefSeq) DDB1- and CUL4-associated factor 7 isoform X1
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122341229 (dcaf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122341229 (dcaf7)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122341229 (dcaf7)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
122341229 (dcaf7)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
122341229 (dcaf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
Beta-prop_Aladin
MIOS_WD40
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_WDR41
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
122341229
NCBI-ProteinID:
XP_043090523
LinkDB
All DBs
Position
3:11640702..11645443
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AA seq
343 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQLVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVNDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAVADDHQALIWDIQQM
PRAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttgcacggtaaacgaaaagagatctacaaatacgaggcgccatggaccgtctat
gccatgaactggagcgtcagaccagacaagcgctttcgcctggcgctcggcagcttcgtc
gaggaatataacaacaaggtccagctggtgggtcttgaggaggagagctcagagtttgtc
tgcaggaacaccttcgatcatccatacccaaccaccaagatcatgtggatccctgacacc
aagggtgtctatccagacctgctggccaccagcggagactatctgcgcatttggagggtg
aatgacacagagacccgtctggagtgtctcctgaataataacaagaactctgatttctgt
gcacctctgacatcttttgactggaatgaagtggatcccaatcttcttggcacttctagt
attgacaccacctgcacgatctggggtttggagacggggcaggtcctaggacgggtcaac
ctggtgtcaggccacgtcaaaacacagctaattgctcacgacaaggaggtgtatgacatc
gcattcagtcgtgcgggtggaggtcgagacatgtttgcgtctgtgggagcagacggatcc
gtgcgcatgtttgacctgcgacacctggagcacagcaccatcatctacgaggaccctcaa
catcacccgctgctccgcctgtgctggaacaaacaggaccccaattacttggccactatg
gccatggatggcatggaggtggtgattctggacgtgcgtgtgccgtgcacacctgtggct
cgtctcaataatcatcgtgcttgtgtgaacggcatcgcatgggcgccccactcctcctgt
cacatatgtacagcagtagcggacgatcaccaggctctgatctgggacatccagcagatg
ccgcgggccatcgaggaccccatcctggcgtacacagccgagggagagatcaataacgtg
cagtgggcctccactcagcccgactggattgccatttgctacaacaactgtctggagatc
ctgcgggtgtaa
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integrated database retrieval system
