Puntigrus tetrazona (Sumatra barb): 122341318
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Entry
122341318 CDS
T08985
Symbol
tmc5
Name
(RefSeq) LOW QUALITY PROTEIN: transmembrane channel-like protein 5
KO
K21988
transmembrane channel-like protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122341318 (tmc5)
03037 Cilium and associated proteins [BR:
ptet03037
]
122341318 (tmc5)
Transporters [BR:
ptet02000
]
Other transporters
Pores ion channels [TC:
1
]
122341318 (tmc5)
Cilium and associated proteins [BR:
ptet03037
]
Other cilia and associated proteins
Stereociliary proteins
122341318 (tmc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
122341318
NCBI-ProteinID:
XP_043090614
LinkDB
All DBs
Position
3:complement(18520572..18524767)
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AA seq
491 aa
AA seq
DB search
MGGFRCYFNQTVLFYGGYDGEVIASKPANNMQLALFFLLXLHIWCCVGVSLYLQVTHLAV
QTTFVLETGPVSEGAWRLLCSWDFSVVNEKAIQYNKNNLAIQLKVHTCPRLQVKNKASLP
DQIKHLSLHLLAWLLSLGLALGSGAGIYFLGTKQELAREFVXSVINVTKRHLLLLLPVVV
SLINLIVPLFYSLIDKMRATPTARAKIYISIVRSVILKMSILGILCFTGYVVPDSISCWE
SFVGQXVYRLLIIDFIFCLLGIFFGEFLISDVIRTMCIQSLGVPEFDIARNVLDLIYAQT
LAWIGIYFSPLLPVMQVLKLFIIFYLKKISLSMNCQPPKHTGRAAQIQTVFIALLFFPSF
VGALTMVAFTVWSLKPSDQCGPFQGLDTPFRTIFNWTASLPENHWVWWIFENILRSELFY
YLISLIVLVFTYFLWQITQGRKQLIKSLREQTGVNEGKDKAFLLNKLQTLQKERKETASY
RPQVLVLMRSV
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgggtggcttcagatgttatttcaaccagacggtcttgttctatggtggttacgatggt
gaagtaatcgcatccaaacctgccaacaacatgcagttggccctattttttctgctgtag
ctgcatatctggtgttgtgtgggagtgtctctatatctacaggtaacacatttagcagta
caaacaacttttgtgctggagacaggacccgtctctgaaggagcgtggcgtctcctgtgc
agctgggatttcagtgttgtcaatgaaaaagcaatacagtacaacaagaacaatctcgcc
attcagctgaaggttcatacctgtccaaggttacaggtgaaaaacaaagcgtctctgcct
gaccagataaaacacctgtctctccaccttctggcctggctactctctttaggacttgcc
ctaggatctggtgcaggcatctacttcctggggacaaaacaagaactggcgagagagttc
gtttagagtgtaataaatgtcacaaaaaggcatctactactgcttctgcctgtggtcgtg
tcgctcatcaacctgatagtgcctctattttactctctcatcgacaaaatgagagctact
ccaactgcacgcgcaaagatctacatcagcattgtgagaagtgttattttgaagatgtcc
attcttggtatcctttgctttactggctacgttgttcccgacagtatctcgtgttgggag
tcctttgtggggcagngcgtgtatcgactgctgataattgacttcatattctgtctgctt
ggcattttctttggggaattcctcataagtgatgtaatcagaaccatgtgcatccagagt
cttggcgtcccagagtttgacattgctaggaatgtacttgatctgatctacgcccagact
ctggcttggattggaatttacttctcccccctacttcctgtaatgcaagtcctgaaattg
tttatcatcttttacttaaaaaagatcagtctgagtatgaactgtcagcctcccaaacac
acaggcagagccgctcagatacaaacagtcttcatcgccctactcttcttcccttcgttt
gtgggagcactgaccatggtagcattcacagtctggagcctgaagccctcagaccagtgc
gggcccttccagggtctggacacccccttccgcacaattttcaattggactgcttctttg
cctgagaatcactgggtctggtggatttttgaaaacatactgagaagtgaactcttctac
tacctgattagcctcatcgtcctagtcttcacttattttctctggcaaatcactcaggga
cggaaacagctcatcaagtctctgcgagagcagacgggtgtgaatgaaggaaaggacaaa
gcatttctcttgaataaactgcaaactctacagaaggagagaaaggagacggcatcctac
agacctcaggtgcttgttcttatgcgttctgtctga
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