Puntigrus tetrazona (Sumatra barb): 122341343
Help
Entry
122341343 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: protein spinster homolog 1-like
KO
K23677
MFS transporter, Spinster family, sphingosine-1-phosphate transporter
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122341343
Transporters [BR:
ptet02000
]
Major facilitator superfamily (MFS)
Lipid transporters
Sphingosine-1-phosphate transporter (Spinster) family [TC:
2.A.1.49
]
122341343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
Sugar_tr
OATP
Rad60-SLD
MFS_4
ubiquitin
VIR_N
DUF6290
Motif
Other DBs
NCBI-GeneID:
122341343
NCBI-ProteinID:
XP_043090628
LinkDB
All DBs
Position
3:20528051..20541188
Genome browser
AA seq
849 aa
AA seq
DB search
MAEMVADSDGGVPASDPPKQPPKRRRILDASSITTAPVYSNKVNSSLNLKPITFKQTALT
DEEKGCPLWCPSPPRIERKPISLDLSGSEEEPEQAEVQQILHSPSPPPSPCSLPVKRSRR
ANRKLQEINRKLHAIGSLACLSPEPREPAAENRDSPSPESDDDDIIIISSDSQKKRRAQN
TEDRDSAREISLKVRCRTELYKIPILSTAPLSKAVEQLASKLDVQPSQILLLKKDIDLPI
HSSISELGLGIADIIDCVVTENKQEELDKSNVITVRLQGKEKASVQEYSLQKNAPLGSIL
SQYISGLSTSARWKPKFLFDGSRVSYNQTPADLDMEDGDVIEVWLMSGTDTTPFFSDDNE
GEGPIDNGVGSPQPEERRXESASGVSDKRAKLTVAVLCYINLLNYMDRFTVAGVLPDIEH
FFSISDGTSGLLQTVFICSYMFLAPLFGYLGDRYNRKLIMCVGIFFWSLVTLASSFIGKD
HFWALLLTRGLVGIGEASYSTIAPTIIADLFIKETRTNMLSIFYFAIPVGSGLGYIVGSK
VDDVAEDWHWALRVTPGLGLLAVILLFFVVQEPKRGAIEAHPEHTLHRTSWLADIKALCR
NPSFVLSTFGFTTVAFVTGSLALWAPAFLFRAGVFTGEKQPCLKAPCDNSDSLIFGIVTV
VTGILGVASGVQVSKKLRTRTPRADPLVCSAGLLLAAPFLYLSIMFAQASTVATYVFIFL
GETFLSMNWAIVADILLYVVIPTRRSTAEAFQIVLSHLLGDAISPYLIGVVSDSLKKSDS
YMWEFRSLQLSLLLCTFVAVGGGAFFLATALFIEKDRHLAENYVPSDDAPIVVPKRGRST
KVPVSSVLI
NT seq
2550 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaatggtagcagacagtgacgggggtgtacctgcatcagaccctccaaaacaa
ccccccaagcgccgacgcatcctcgacgcgtcctccatcaccacagcgcctgtttactcc
aacaaggttaacagctccttaaatctcaagccaataaccttcaaacaaaccgctctcaca
gacgaggaaaagggttgtcctctgtggtgtccctccccacctcgtatagagagaaagcca
atcagccttgatctgagtggctcggaggaggagccagaacaggctgaagttcagcagatc
ctccattccccctctccacccccttcaccttgtagtctaccagtgaaacggagcagacgg
gcaaaccgaaaattacaagaaatcaacaggaaattgcacgcaattggctctctggcgtgt
ctctcacctgagcctcgggagcctgcggccgaaaacagagactctccatctcccgagagt
gacgatgatgacatcatcatcatttcttctgacagccaaaagaaacgacgtgcccagaat
actgaggacagagactcagcgcgggaaatttcactaaaagttcgctgtcgaacggagttg
tacaaaatcccaatactctctacagctcctttgagtaaagctgtggaacagttggccagc
aaactcgatgtgcaacccagccaaattctgttactaaagaaagatattgatctccctatt
cactcgtccatcagtgagctggggctcgggatagctgacattatagattgtgtagtaacg
gagaataaacaagaagagctcgacaaaagcaatgtcattactgtacgactgcaaggcaag
gagaaagcatctgtgcaggagtattccctacaaaagaatgctcctttagggtccatccta
tcccagtacatctctggtttgagcaccagtgctagatggaaacccaaatttctcttcgat
gggtcaagggtctcatataatcagaccccagctgacctggacatggaggacggggatgtc
attgaagtctggttgatgtcaggaacagacaccacaccctttttctcagatgataatgag
ggggaggggcctatcgacaatggggtgggatcacctcagcccgaagagaggaggnaggag
tctgctagcggagtgtctgataagagggctaaacttactgtggctgtgctctgctacatc
aacctgctgaactatatggaccgattcactgtggcaggtgtacttccagacattgagcat
ttcttcagcattagtgatggaacatcaggactacttcagacagtcttcatctgcagttac
atgttcctggctcctctgtttggatatctgggagaccgctataacaggaagctgattatg
tgtgtggggatttttttctggtccctagtgacattagccagttccttcattggaaaagac
catttctgggcgttgttgttgacgcgagggctggtgggtattggggaggccagttactcc
accatagctcccaccatcatcgctgaccttttcatcaaggagacaaggaccaacatgctg
tccattttctactttgcaatcccagtgggcagtggtctgggttatatcgtgggctcaaag
gtggatgatgtggctgaggattggcactgggctcttcgggtgacccctggtctggggctg
ctggctgtgatcctcttgttttttgtagttcaggagccgaagcggggtgcgatcgaagct
catccagagcacacgctgcacagaaccagctggctggcagacataaaagcactctgcagg
aatccaagttttgttctgtccacgtttggcttcacgactgtggcctttgtgacaggatca
ctggcactgtgggcccctgcctttttattcagagcgggtgtcttcacgggagagaagcag
ccgtgtttaaaagccccctgtgacaactctgacagtctgatttttggcatcgtcacagtc
gtgacgggtatcctgggagtagcgagtggtgtgcaagtgagcaagaagctgaggaccaga
acccctcgagctgatccgttagtctgttctgcaggactcctcctcgctgccccctttctc
tatctgtccatcatgtttgctcaggctagcactgtggccacatatgtctttatcttcctg
ggagagacattcctgtctatgaattgggccattgttgctgatatccttctgtatgttgtg
atccccacacggcgctccacagcagaagcctttcagattgtactctcacacttgctgggc
gacgctattagcccttacctcataggagtggtgtccgactcgctaaagaaatcagactcg
tacatgtgggagtttcgttcacttcagctgtccctcctgctgtgcacctttgtggcagtg
gggggcggggctttcttcctggccacggctctcttcattgagaaggaccggcatctggca
gagaactacgtgccctctgatgatgcaccaattgttgttccaaagagagggaggtccact
aaagtaccagtgtcaagtgttttaatttga
DBGET
integrated database retrieval system
