Puntigrus tetrazona (Sumatra barb): 122341385
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Entry
122341385 CDS
T08985
Symbol
tbl3
Name
(RefSeq) LOW QUALITY PROTEIN: transducin beta-like protein 3
KO
K14555
U3 small nucleolar RNA-associated protein 13
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122341385 (tbl3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122341385 (tbl3)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122341385 (tbl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp13
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_CAF1B_HIR1
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_SCAP
WDR90_beta-prop_4th
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Vps41
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
122341385
NCBI-ProteinID:
XP_043090652
LinkDB
All DBs
Position
3:complement(25966174..25984446)
Genome browser
AA seq
1233 aa
AA seq
DB search
MAGRALSFKSNYAVSSKIEPFYKGGKVQISHDEQYILCTCGPRVNILQINTGKIIHSIEQ
DDQEDITSFSLSPDDEVLVTASRALLLKQWDWKQEKCTRSWRAIHNVPVSSMTXDSTSTL
LATGGCDGTIKLWDVLKQYCTHNLKGSSGVVHLVEFHPXISRLQLFSSSVDCGIRIWGPA
EQQVYLCLESHFSAVTSLAFSPIYENSNXTKICSVWDLKKKTVKKTVLAYEAVEGVVLLP
EKGDYSQMGVKGEGLHFVTAGSKGILRVWDSLSARCVFIQSLPDAPALNTDEGHLDPRSL
MHLLPMPQSNRLVSATAEHNILIYQMPXLAVQQQVSPTVHLLPGLNDDVLDVKFLGRDDT
HIVVATNSSQLKVFELATNSCQILYGHTDTILSIDVLRKGSMFASCAKDKSLRLWKMDDV
APGRVHCVAQGSGHSNAVGSIACSRLKKVFLVSGSQDCTVKVWDLPDSFPEVGCEPVLMX
RHGSXEKAHDKDVNSVTVSPNDKLLATGSQDRTAKLWLLADMSLLGAFRGHSRGIWCVQF
SPWTRXLASASADGSIKIWSLQDFSCSRXTFEGHDASVLKVIFVSRGTQLVSSGSDGLVK
LWTIKKRKCIKTFDAHQTKCGLCNGSSKDDLIVTGSADSTITPDVTKVELAEEQAKQEDP
MFLRLHRQQELSNLLHEKKYLKALGIAISLDHPHTALRVIREIRQQEDGVQELXKTLLKL
RQDQKESVLRYSVVXNTNSRSCLDAQAVLQVLLTHLSPEEILQYQGARTHLEGLVPYTER
HMQRIGRLLQSSMFLDYMWQKMRITGLRFWMPHAVLVLYSHTVSVARVGGVRKMSDSEEN
APSTTSSQVTDLVDKKERDLVTAQEELKLPRHKMVTESPTRWGSRQKMVARVIEQHKAIS
QVLTADKKTRHLVPTWQDIDVLESINEGLKPLLEFTDSLSGESYVSVSYLKPVLHLFKTE
VLKHSDDDTQLTKDIKTVVIDYLSEKYDEEITDELLDMASLVDPRFKTQYIRPEKIEGIK
QRAVSEILNMEGDQGPSTSQASYRTEEMEAEGSCCSCSCQEAEEVVEMELEHYLMAPDAD
SETEPWIGGRSRKTLYHYFHKNMKYAGLLFFPSVNLDDDEDEMDTSPQTFFIIDKQQMDK
ADIQGSLQQQDEEDEEEDLEDSDKREELLEDESVSTSKSARVNGVKPSGVNAVTDGGQAS
SEESEDEDDAIEINESLPTESMGSEPSKTADIR
NT seq
3702 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcgcgctgtcgtttaaatcaaattacgcagtctccagcaaaatagaacca
ttctataaaggaggtaaagtgcagataagtcacgacgagcagtacatcttgtgcacatgt
ggtccacgagtcaacattttacagatcaatacaggaaaaatcatccatagtatcgagcag
gatgatcaggaggacatcacctcgttctctctgagtcccgacgatgaggtgctggtgacg
gccagcagggctctgctcctgaagcagtgggactggaagcaggagaagtgcactcgctcc
tggagggccatccacaatgtgcccgtgtccagcatgaccnttgactccacctccaccctg
ctggctacaggtggctgcgacggcaccatcaagctgtgggatgttttgaagcagtactgc
acacacaacctgaaaggatcgtctggggttgtacatttggttgagtttcatccgnacatc
agcaggctgcagctcttctcctcctccgtggactgtgggatcaggatctggggacctgca
gagcagcaagtgtatctgtgtttggagagccactttagtgccgtcacatccctggccttc
tccccgatttatgaaaactctaattagacaaaaatctgttcagtttgggacctgaagaag
aagaccgtcaagaagactgtcctcgcctatgaggctgtggaaggtgttgttcttctccct
gagaagggcgattactctcagatgggtgtgaagggtgaagggttgcactttgtcacagct
ggcagtaaaggtattcttcgagtgtgggactccctgtccgctcgctgcgtgttcatccaa
tcgctgcccgatgctccggctctcaacacagacgagggtcatttagacccgcgcagcctg
atgcacctcctgcccatgccgcagtccaacagactggtcagcgccaccgcagagcacaac
atcctcatctaccagatgcccnngctcgctgtacagcagcaggtgagccccacggtccac
cttctgcccggcctcaatgacgatgtcctggatgtgaagttcctgggcagggatgacacg
cacatagttgtggccaccaacagctctcagctgaaggtgtttgagctggccactaacagc
tgtcagattctgtatggacacacagataccatcttatctatcgatgtcctccgcaaaggt
tccatgtttgccagctgcgcaaaggacaagtccctgcggctgtggaagatggatgacgta
gcgcccggcagggtgcactgcgtggctcagggcagcggacactccaacgccgtgggctct
atcgcctgctccaggttaaagaaggtcttcctggtgtcgggcagtcaggactgtactgtt
aaggtctgggacctgcctgactcttttcctgaagtgggatgtgaaccggtgttgatgnna
cggcacggctcgtgagagaaagctcatgacaaggatgtgaacagcgtgaccgtctctccc
aatgacaagctgctggccacgggctctcaggaccgtactgctaagctctggttgctggct
gacatgagtctgctgggcgccttcagaggtcacagtcgcggtatttggtgcgttcagttc
tctccgtggaccaggnntctcgcctcggcctcagcggacggctccatcaaaatctggtcc
cttcaagacttcagctgctcaaggtgaacgtttgagggacatgacgcctctgtgttaaag
gtcatatttgtcagtcgaggaactcagctagtgtcgagtggttctgatggacttgtgaag
ttgtggaccataaaaaaacgaaagtgcataaaaacatttgacgcccaccagacaaagtgt
gggctctgcaacggcagcagcaaagatgacctgatagtgacgggatcagccgactccacc
atcacgcctgacgtgactaaagtggagctggcagaggagcaggccaaacaggaagacccg
atgtttttgcgtcttcacaggcagcaggagctgtcaaatttacttcatgagaagaagtac
ctgaaggctctgggaatcgccatctccctggatcatcctcacactgcattacgagtcatc
cgagagatacgccagcaggaggatggcgtgcaggagctangaaagaccctcctgaagctc
cgccaggatcagaaagagtcggtgttgcgatactccgtggtgntgaacactaattcccgc
agctgtctggacgcccaggctgtcctgcaggtgctgctcacacacctgagcccagaagag
atcctgcagtatcagggcgctcgcacccatctcgagggcctggtgccgtacacagagaga
cacatgcagcggattggccgtctcctgcagtcctcgatgtttctggactacatgtggcag
aaaatgcgtataacgggcctgcgcttctggatgccacacgcagtgttagtactatacagc
catacagtgtcagttgcacgtgttggaggagtaagaaaaatgagcgacagtgaagaaaat
gcaccgtccacgactagctcgcaggtcacagacttagttgacaagaaagaaagagacctt
gtgactgctcaggaagaacttaaactgcccagacacaagatggtgacagaatcacctacc
aggtggggctcacgtcaaaagatggtggccagggtgattgaacagcacaaggctatcagt
caggtactcactgctgacaagaaaaccagacacttggtgcctacctggcaggacattgac
gttttggagtcaataaatgagggcttgaaaccacttcttgagttcacagattcactgtct
ggtgaatcttatgtgagtgtgtcctaccttaagcctgtgctgcacctcttcaaaacagag
gtcctgaaacattctgatgatgacacacagctcacaaaggacataaagacagtagtcata
gactatctcagtgagaagtatgatgaggagataacagatgaactgcttgatatggcatcc
ttggttgatccgcgcttcaagactcaatatatcaggccagagaaaattgagggaatcaaa
caaagagcagtttctgagattctgaatatggaaggagaccaaggtccatccacttcacag
gcttcatacagaacagaagaaatggaggcagaggggagctgctgcagctgttcctgccaa
gaagcagaggaagtagtggagatggagctggagcactacctcatggctccagatgcagac
agtgaaacagaaccctggattggtggaagatcaagaaaaacattataccactatttccac
aaaaatatgaaatatgctggtctgttgtttttccccagtgtgaacttggatgatgatgaa
gatgagatggacaccagccctcaaaccttcttcatcatagacaagcagcagatggacaag
gcagacattcagggatctctgcagcaacaagatgaagaagatgaagaggaggatctggag
gattcagataaaagagaggagcttcttgaagatgaaagtgtcagcacatctaaaagcgct
cgcgtgaacggcgtgaaaccgagcggcgtgaacgctgtcacagatggaggtcaggcgtcc
agtgaggagagtgaagatgaggatgatgccatagaaattaacgagtctcttcccaccgaa
tctatgggttcagagccctccaaaactgcagatataaggtga
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integrated database retrieval system
