Puntigrus tetrazona (Sumatra barb): 122341440
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Entry
122341440 CDS
T08985
Name
(RefSeq) F-box/WD repeat-containing protein 9-like
KO
K10265
F-box and WD-40 domain protein 9
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122341440
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122341440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
EIF3I
NBCH_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_like
WDR90_beta-prop_4th
Beta-prop_LRRK2
Beta-prop_SCAP
Beta-prop_IP5PC_F
F-box-like
Motif
Other DBs
NCBI-GeneID:
122341440
NCBI-ProteinID:
XP_043090752
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Position
3:5949149..5954642
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AA seq
500 aa
AA seq
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MSRTSVALEDEEKQQRCPADAGPPDFIPDTPHFLPERLNLEASVSAMETSPSPSSNGTNL
LSLPWEIVTQIASHLPAQCVISVLPQVCQTLGKLGEDRLAWQLRAQKLSGPAASFPAGPK
EDFDWSKACLEMEQLIGCWTGHENHAETQDEAAVGVNSENLVEMQLDVEVNAAARAGEDD
VRVQSQSASDGPHLTESSGTSSPLEHIVLPSGHIADVNCVLLLGGEEALCASGSRDRNVN
LWDLREGPRGKLMHTLAGRGTISTHRGWVWCLASSGPLLASGSFDSTVRLWDLEAGGAER
GLIQCKAAVLCLSCERDTVLAGSHDQKLSIFDTRAADPLVKSLRLHGDAVLCLASDDQYI
LSGSKDHTVALFDRRAGKLLQKVQLSSYLLSLSCSGREVWAGDNRGLVHTFSLHGSSLAP
VSQFNIHRSLVTGVHYSTGALYTCSSDRTIKVHLPCAPPKTLCTLHHQAGVNGLSVEGGT
LAIASGDMNVEVWRPEMLRV
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagaacaagcgtcgctctggaggatgaggagaagcagcagagatgccctgctgat
gccggtccacccgatttcatcccagacaccccacacttcttacccgagagattgaatttg
gaagcatccgtcagcgctatggagacaagcccctccccttccagcaacggaaccaacctc
ctgtcgttgccgtgggagatagttacccagatagcctcacatctcccagcacagtgtgtc
atcagtgtgctgccacaggtatgtcagaccctgggaaagcttggcgaggatcgcttggcg
tggcagcttcgggctcaaaaactctcgggccccgcagcatctttcccagccgggccgaag
gaggatttcgactggtccaaggcatgtttggaaatggagcagctgattggctgctggacg
gggcacgagaatcatgcggagacacaggacgaggcagctgtcggggtgaacagcgaaaac
ttggtggagatgcagctggatgtcgaggtaaacgctgcagcgcgggccggagaagacgac
gtacgagttcagtcccagagtgcctctgacggtccccatctgaccgagtcatccggcact
tcttcacccctggagcacatcgtccttccctccggccacattgcagatgtgaattgcgtc
ctcctgttgggcggagaagaggcgctgtgtgcctccggctcgagggaccgaaacgtgaac
ctgtgggacctccgagagggccccagaggcaagctgatgcacactcttgcggggcgcggg
accattagcacccaccggggctgggtgtggtgcctggcgtccagcggacctctgctggcg
tctggctcgtttgacagcaccgtcaggctctgggatctggaagccggaggagcagagcgg
ggactcatccagtgcaaagctgctgtattgtgtctgtcctgcgagagggacacggtgctg
gctgggtcacatgaccagaaattaagcatctttgacacccgagccgcagacccattggtc
aagagtctccgtcttcacggtgatgctgtgttgtgcctggcgtctgatgaccagtacatc
ctgtccggcagtaaagaccataccgtggctctgttcgaccgcagggcgggaaaactcctg
cagaaagtccagctgagctcgtacctgctgtctctgtcctgcagcggccgggaggtgtgg
gccggggataaccgtggactcgtgcacaccttctccctgcacggcagctccctggcgccc
gtgtcccagttcaacatccaccgctcactggtcaccggcgttcactactctactggagct
ctctacacgtgctcctccgaccgcaccatcaaggtccaccttccgtgtgctccacccaag
accctgtgtacccttcaccatcaggcaggagttaacgggttaagtgttgaaggaggaacg
ctggccatcgcctccggtgacatgaacgtggaagtctggaggcccgagatgctgagggtc
tga
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