Puntigrus tetrazona (Sumatra barb): 122341571
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Entry
122341571 CDS
T08985
Symbol
nup85
Name
(RefSeq) nuclear pore complex protein Nup85 isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122341571 (nup85)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122341571 (nup85)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122341571 (nup85)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122341571 (nup85)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
122341571 (nup85)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
P2_Phage_GpR
Motif
Other DBs
NCBI-GeneID:
122341571
NCBI-ProteinID:
XP_043090962
LinkDB
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Position
3:complement(2631782..2640091)
Genome browser
AA seq
666 aa
AA seq
DB search
MEEVDVEPSTTLIPGAGFHQKHLGFEWGPGDMLVYETSHKLQGPRSAGCPLVHVVRKDED
ICSPILRKLFNESHLIFVGLQKTKEDAPSKNKKSQFVSISKNYRSVIRACMEELQQNAVS
ARDGSLASQYGDQVSILLAVELIWNLCEVLFIDAAPAGSLLLHLLDWVRLHKSDVDSRAR
EVLGSDSPAEHQSYWDVVISLVLQGRMDEARQVLSKQASLRAESSSVFKRMDGLLQTMPM
FNPTGSQTLTEFDVKWRHWHEECDRCLQDNTFASNRHLETVCKVLVGDEDTLLEQKELLS
TWYHFLVTRLLFTHPTIKPPELHYYAQSSMNMFLGPRASPEPLDIILLSAFEFDLHQVIK
DCSIALNNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLVLEYASGLFTHHSLWQLAVD
YFDHCPEFGRVYLELQIERVPLDTGRKAVKVLRICEDRQMSEQVRSICKIMSKRALRNNR
LGSALSWSIRAKDAAFATLISERFLQDYSNKGSFADLDLLDNLGPAMLLSDRLTFLGKYR
EFHRLYGEKRFSEAARLLLSLMTARIAPRSLWMTLLTDALPLLEQKEVIFSVDQTYELMS
CLEELNSGTKDSNQTDQVQIIQNIRGKRISCELACHFLLRFRMKILSPRRRSSCDWLWPV
TSPWPS
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggtggatgtagagcccagtaccacgctcattcccggcgctgggtttcatcag
aagcacctgggcttcgaatggggtcccggagatatgttagtgtatgagacgagccacaaa
ctgcaaggtccgaggtccgccggctgcccgctcgttcacgtcgtgaggaaagacgaagac
atctgctctcccatcctgcgcaagctcttcaacgagtcccacctcatcttcgtagggctg
cagaaaaccaaagaggacgcgcccagcaaaaacaagaagtcgcagtttgtgagcatcagc
aagaactacaggtctgtgatcagagcgtgcatggaggagctgcagcagaacgcagtttca
gcacgagacggctctttagcatcgcagtatggagatcaggtctctattctcctggccgtc
gagctcatatggaacttgtgcgaggtcctcttcatcgacgccgctccagccgggtctctg
ctgctgcacctgctggactgggtgcgtctgcacaagtcggacgtggactcgagagcgagg
gaggtgttagggagcgacagccccgccgagcatcagtcctactgggacgtggtcatcagt
ttagtcctgcagggccgaatggatgaagctcgtcaggtgctctccaaacaggcgtctctg
cgagccgagagcagctctgtgttcaaacgcatggacggcctgcttcagaccatgcccatg
tttaaccccacaggaagtcaaacgctgaccgagtttgacgtcaaatggagacactggcac
gaggagtgtgaccgctgtctccaagacaacaccttcgctagcaaccgtcacctggagacc
gtctgcaaggtcctggtcggggatgaggacacgttactggagcagaaggagctgctgagc
acctggtatcacttcctggtcacacggctgctcttcactcaccccaccatcaaaccgccg
gagctgcactactacgctcaatcgagcatgaacatgtttctgggtccgcgggcgtctccg
gagcctctggacatcatcctgctgtcggccttcgagttcgacctgcatcaggtgatcaag
gactgcagcatcgcgctcaataactggtggttcgtggctcatctgacagacctgctggac
cactgcaaacttctgcagtcacacaacctccattttgggtctaatctgcgtgagtttctg
gtcttggagtacgcctcgggtctcttcacacatcacagtctgtggcagctggcggtggat
tacttcgatcactgtcccgagttcggtcgtgtgtatctggagctgcagatcgagagagtc
ccgctcgacaccgggcgcaaagccgttaaagtcctgcggatctgtgaggacagacagatg
agtgaacaggtgcgcagcatctgtaagatcatgtctaagcgggctctgaggaacaacaga
ctgggatctgctctgtcctggagcatcagggccaaagacgcagcgttcgctacactcatc
tctgagaggtttcttcaggattacagtaacaaaggctccttcgcggatctggatttgttg
gataatctgggtcctgccatgctgctcagtgacagactgacgtttttaggaaagtaccgt
gagtttcacaggctttacggcgagaagcgtttctccgaggcggcccgactgctgctgtcc
ctcatgacggcgaggatcgccccgcgcagcctgtggatgaccctgctgaccgacgcgctg
ccgctgctggagcagaaagaggtgatcttctcggtggatcagacgtatgagctcatgtcc
tgtctggaggagctgaactctgggaccaaagactcgaaccagacagaccaggtacaaatc
atccagaacatccgagggaagcgtattagttgtgaattagcatgtcattttctgctgcgt
ttcaggatgaagattttgagtccacgaagacggagctcctgcgactggctctggcccgta
acctcgccatggccatcgtga
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