Puntigrus tetrazona (Sumatra barb): 122341578
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Entry
122341578 CDS
T08985
Symbol
atg4db
Name
(RefSeq) LOW QUALITY PROTEIN: cysteine protease ATG4D
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04136
Autophagy - other
ptet04140
Autophagy - animal
ptet04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122341578 (atg4db)
04140 Autophagy - animal
122341578 (atg4db)
04136 Autophagy - other
122341578 (atg4db)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ptet01002
]
122341578 (atg4db)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122341578 (atg4db)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122341578 (atg4db)
Peptidases and inhibitors [BR:
ptet01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
122341578 (atg4db)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
122341578 (atg4db)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122341578 (atg4db)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Peptidase_C78
Motif
Other DBs
NCBI-GeneID:
122341578
NCBI-ProteinID:
XP_043090974
LinkDB
All DBs
Position
3:2501588..2509106
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AA seq
456 aa
AA seq
DB search
MDVSDERDGATEAADDLASFEVVNLSNPGPRDLGSDVDGRLQEPKDKTKLKTKLISAWNN
VKYGGWSLKSKPXVCLLGQCYQLSYSGERESFRRAFSSLLWMTYRRGFPPLDGTVLTSDA
GWGCMLRSAQMLLAHGLMLHTMPAGWTWPAAHHQTKDDLEVLDAHMLEDSFREGKARRCS
LGTALDCPAQEERSHRRVVSWFGDLSSAPFGLHRLVELGRASGKRAGDWYGPAIAAHILQ
KAVAASEVSDLAVYVAQNCTVYVGDVLDLCGTPRTDLSARRRSGWRSLVLLVPVRLGSDV
LNRAYTGCVKRLLELRCCVGIIGGKPKHSLFFVGFQGDQLIYLDPHYCQAAVDVQQDNFP
LESFHCKTVRKMPFSRMDPSCAVGFYAGSREDFQALCSDVTKALTSSEEKYPIFTFVEGR
SEEEMSFTSDSAARVQKIDGPGRTKNKSSLEEFVLL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgagtgatgagcgtgacggcgcgacggaggccgcagatgacctcgcgtcgttt
gaggtggtcaacctgtcgaacccgggcccgcgggatctgggctcagacgtcgacggacgc
ctccaggagccaaaggacaagaccaaactcaaaaccaaactcatttcagcgtggaacaac
gtcaaatatggaggctggtctctgaagagcaagcctngtgtgtgtctgctgggacagtgc
tatcagctgagctacagtggagagcgggagagcttccggcgggcgttctcctctcttctc
tggatgacctacaggagaggtttcccgccgctggacggcacggtcctcacgtctgacgcg
ggatggggctgcatgctccgcagcgcacagatgctgttagctcacgggctgatgctgcac
acgatgcccgcgggctggacgtggcctgcggcgcaccatcagaccaaagacgacctggag
gtgctggacgctcacatgctggaggactccttcagagagggcaaggctcgcagatgcagc
ctgggaacggctctggactgccctgctcaggaggagcgctctcacaggagggtggtgtcc
tggttcggtgacctgtcctccgctccgttcggtctgcaccggctggtggagctgggcagg
gcctcggggaagagagcgggcgactggtacggaccggccatcgctgctcacatactgcag
aaggccgtggcagcgtccgaggtgtccgatctggcggtgtacgtggcacagaactgcaca
gtgtatgtgggagacgtgttggacctgtgcgggacgccccgtaccgacctctccgcgagg
cgcaggtccggctggaggtcgctggttctgctggtgcctgtgcgtttgggctcggatgtg
ttgaatcgggcctacaccgggtgtgtgaagaggctgctggagctgcggtgctgcgtgggg
atcatcggagggaaacccaaacactcgctgtttttcgtgggattccagggcgatcagctg
atttatttggatcctcattactgtcaggccgctgttgatgtccagcaagacaacttccct
ttagagtcgttccactgtaaaacggtcaggaagatgccgtttagccgcatggacccgagc
tgcgccgtgggtttctacgccggaagcagagaggacttccaggctctgtgttcagacgtc
accaaggctctgacgtcatccgaggagaagtaccccatcttcacgtttgtggagggtcgc
agcgaggaggaaatgagcttcacgtcagactcggccgctcgtgtacaaaaaatagatgga
ccgggccgaaccaaaaacaagagcagtttggaggagtttgtgctcttgtga
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