Puntigrus tetrazona (Sumatra barb): 122341799
Help
Entry
122341799 CDS
T08985
Name
(RefSeq) ras-related protein Rab-40C-like
KO
K07928
Ras-related protein Rab-40
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122341799
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
ptet04031
]
122341799
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
122341799
GTP-binding proteins [BR:
ptet04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
122341799
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
122341799
NCBI-ProteinID:
XP_043091365
LinkDB
All DBs
Position
3:18828665..18841760
Genome browser
AA seq
287 aa
AA seq
DB search
MGHRADVKMNHRSSPAKAYDFLLKFLLVGDSDVGKGEILASLQDGSSESPYGYNMGIDYK
TTTILLDGRRVKLELWDTSGQGRFCTIFRSYSRGAQGILLVYDITNRWSFDGIDRWIREI
DEHAPGVPRILVGNRLHLAFKRQVPTEQARAYAEKNGMTFFEVSPLCNFNVIESFTELSR
IVLMRHGMEKFWRPNRVFSLQDLCCRAIVSCTPVHLIDKLPLPVAIKSHLKSFSMANGMN
AVMMHGRSYSLANAAGGSKGNSLKRSKSIRPPQSPPQNCTRNNCKIS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcgggctgatgtgaagatgaaccacaggagcagcccagcaaaagcttatgat
ttcctcctgaaattcctgctggttggagacagtgatgttgggaaaggggaaatactggcc
agtctacaggatgggtccagtgagtcaccctatggatacaatatgggaatagactacaag
accaccacaatcctgttggatgggcggagagtgaagcttgagctttgggacacctcggga
caaggcagattctgcaccattttccggtcgtactccaggggagcgcaggggatcctgttg
gtgtatgacatcaccaaccgctggtcgtttgacgggatagaccgctggatcagggagatt
gatgagcacgcacctggtgtaccccgtattcttgtgggtaaccggctgcacctggcattc
aagcgtcaggtccctacagaacaggcacgtgcgtacgcagaaaagaacggtatgacgttt
ttcgaagtgagccctctctgcaacttcaacgtcattgagtcgtttacagagctgtcgcgc
atcgtgctgatgaggcatggcatggagaagttttggaggcccaacagagttttcagcctg
caggacttgtgctgccgcgccattgtgtcctgcacccccgtgcacctaatcgataagctg
ccgcttcctgtggccatcaagagccatctgaagtcgttctccatggccaacggcatgaat
gccgtcatgatgcacggacgatcctactcgctagccaacgccgccggaggcagcaaaggc
aacagcctcaaacgctccaaatccatccggccgcctcagagtccgccacagaactgcacc
aggaacaactgtaagatctcctag
DBGET
integrated database retrieval system
