Puntigrus tetrazona (Sumatra barb): 122342006
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Entry
122342006 CDS
T08985
Symbol
caskin1
Name
(RefSeq) caskin-1 isoform X1
KO
K21952
CASK-interacting protein
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122342006 (caskin1)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Calcium ion-dependent exocytosis
Kinases and associated proteins
122342006 (caskin1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Caskin-Pro-rich
Ank_5
SAM_2
Caskin1-CID
Ank_3
Caskin-tail
SH3_2
SH3_1
SH3_9
Motif
Other DBs
NCBI-GeneID:
122342006
NCBI-ProteinID:
XP_043091715
LinkDB
All DBs
Position
3:complement(13808307..13884781)
Genome browser
AA seq
1578 aa
AA seq
DB search
MGKDQELLQAVKTEDLMTVQKLLQRPKPGKAKLLGSAKKVNVNFQDTDGFSPLHHAALNG
NVEVISLLLESQAIVDIRDQKGMRPLHYAAWQGKSEPMKLLLKSGSSVNGQSDEGQIPLH
LAAQHGHYDVSEMLLQHQSNPCIVDNAGKTPLDLACEFGRVGVVQLLLSSNMCAALLEPK
PGDSTDPNGTSPLHLAAKNGHIDIIRLLIQAGIDINRQTKAGTALHEAALCGKTDVVRLL
LDSGINATVRNTYSQTALDIVYQFTATQASREIKQMLRGKKRDASAALQVRALKDYCNNY
DLTSLNIKAGDVITVLEQHSDGRWKGCIHDNRTGNDRVGYFPSSLVEVISKRPGAAGKRG
QQAGSWSTVTCTQQYQKIQLCAPVCGPVSPAVAMVNGDSYHEIHILPPPPPPPPHSHLPL
FTSFGYNRSPNTSGEPHSGQEAKNDQDLASSRGSESSPHGSPTPAGGPHGGSSEEIWVLR
KPVAGGDRSSVGSSGSVTSARSSGSGQSAGSSSILHAQAEGVKLLATVLSQSAKAKEHLL
EQTKSLDHPSHASSNKGPSSRSQSLSSCPLHEQPYGEAVSQRKGEVLPEGKSSEAVIEWL
SEFQLQVYAPNFISAGYDIPTISRMTPEDLTAIGVTKPGHRKKITSEINKITVNEWLPDQ
KPASLGEWLAMIGLSQYHQILVQNGYENIDFITDITWEDLQEIGITKLGHQKKLMLAVKK
LAEIQKASDGRNTLRKKPPVTQEVMAIESPPHDSGECMSPKMTTFQDSELSGELQAALTR
PADVQDGAEMRTNSNLGPQHRARSLHENSMSKSRDSEEPSGPPKKEARTMRQSSQGGVRS
TSSAQPKPRQSYPQGAGPPYTPPQTPTKTKPPTSQAMSNPPSKQKPSTQLHQQTEKPITT
RAHPQSPTQRSHPHPVSQPVETKEAAPQGPAVSVPLLCLPPEGDEACDEYGLPKKRAHSL
NRYAVSDGEQERDELNVPDSGGKYATVQNRVGRSNSMKGQADKNVNRSQSFALRQKKKGP
PPPPPKRSSSAISSSSSNLTEVPKETSSGPLLEVPYQPQRRASDLGGTVDTGSAGSVRSI
AAMLEMSSIGGGAKGLALQKSAGHYLQVGSTGGKQRDAIGLDGEVVNRRRTISGPVTELV
AAAKRGPQPEPVQDRQRNETQPSSSGSSAENLPFAEDGNLTIKQRPRQGKDENEEGLEMS
YSLSQEDHSHVDTTASLKRMVQSTKQQPNGTKFQLTESNTVKRRPKNKDKDTEELQDGQM
PVPYENGTGTIKRRPVSEVTVSEQPRPQEHPENSPRRDSADLEGHVTESAPRKSVKPPVS
PKPVLAQHMKKQGPPAAITKKAPFPGPTGAPGSPGTTQCGPFTCPVFTQLFEGKKVPPPI
SPKPTPPPTAPKPSKNVLQSLNATPNPTPIPSPAKQTVTRMASTAPAQNNHPVKATTPPA
LSAQTPHTPQSPHTPQTPQTPQTPLTPQTPQTPQTSGPPTPTPTPPPVKPPRSSISGVSM
DSSTGSAFVAGVVTVDAVHQKIEETSASLAAALQAVEEKIKEDGQKDSLAENKSTVSILD
DIGSMFDDLADQLDAMLE
NT seq
4737 nt
NT seq
+upstream
nt +downstream
nt
atggggaaagatcaggaattactgcaagcggtgaagactgaggacctgatgacggtgcag
aagctcctgcagaggcccaaacctgggaaagcaaagttgttgggctctgccaagaaggtg
aacgtcaacttccaggacactgatggattttcaccactgcaccatgcagctctcaatgga
aatgtggaggttatatctctgctgctggagtctcaggccatagtggacatcagggaccag
aaagggatgcggcctctgcattatgcggcgtggcagggaaagtcagagcccatgaagttg
ctcctgaagtcaggctcttctgtgaacggtcagtctgatgagggtcagatccccctgcac
ctggctgctcagcacggacactatgacgtatctgagatgcttctgcagcaccagtcgaac
ccctgcatagtcgacaatgctgggaagaccccactggacctggcttgtgaattcggtcgg
gttggggtggtccagctgctactgagcagtaacatgtgtgcggctctgttggagcccaag
cccggagactcgactgatcccaacggcaccagcccgttgcatctcgctgccaaaaacgga
cacatcgacatcatcagattgctgatccaggccggtatcgacatcaacaggcagaccaaa
gcgggcactgccctgcatgaagctgcgctgtgtgggaagactgatgtggtgcgcctcctg
ctggatagtggcatcaatgcaacagtgagaaacacatacagccagacggccctggacatc
gtctaccagttcactgctacacaggccagccgagagatcaagcagatgctgcgaggtaag
aaaagggatgcctcagcagccttgcaggtcagggcactgaaggactactgtaacaattac
gacctgactagccttaatataaaggctggagatgttatcacggttctggagcaacattca
gatgggaggtggaagggctgcatccatgataaccgcacaggaaatgacagagtgggctac
ttcccctccagcttggtggaagtgatcagtaagaggcctggggctgcgggtaagagagga
caacaggcgggttcatggagtacagtcacttgtacccaacagtatcaaaagatacagctc
tgtgcgccggtgtgcggccctgtgtcgcccgccgttgccatggtgaatggggactcgtat
catgagattcatatcctgccgcctcctccacctccgccaccacattcccatctgccactt
ttcacttcctttggctataacaggtccccaaacacctcaggagagccgcacagtggacaa
gaggccaagaatgaccaagatttggctagttctcgcggctcagagtccagtccacatggc
tcacccaccccagccggtggtccccacggcggcagcagcgaggagatctgggtgctgcgc
aagcctgtggcaggtggagaccgcagcagcgtgggaagttcaggcagtgtgaccagtgcc
cgatcctctggtagtggacagagcgcaggcagcagcagtatccttcatgcacaggcagag
ggagtcaagcttctggccacggttttgtcccagtcagccaaagctaaagaacacctgctg
gagcagaccaagtctttggaccacccctctcacgcttccagcaacaagggaccctcctca
cgcagtcagagtttgtcaagctgtccacttcatgagcagccgtatggggaggcggtgtct
cagaggaaaggggaggtgctgcccgaggggaagagctcagaggctgttatcgaatggctg
agtgaatttcagctgcaggtctacgctccaaacttcatcagcgctggctatgatattcct
accattagccgaatgaccccagaggatttaacagctattggagttaccaaaccaggacat
cgaaagaagataacctcagagatcaataagataactgtaaatgagtggctgcctgaccaa
aaaccagcgagtcttggagaatggttagctatgattgggttgagtcagtatcaccaaatc
ttagtccaaaacggatatgagaacattgacttcatcactgacatcacgtgggaggacctt
caggagattggcattacaaaacttggacaccagaagaagcttatgcttgcagtgaagaag
ctagcagagatccaaaaggcctctgatggtcgcaacacattgcgtaaaaagcccccagtc
actcaggaagtgatggctattgagagcccaccccacgacagtggagagtgtatgtcccct
aaaatgacaacgttccaggacagtgaactgagtggggagttacaggctgctcttacacgc
cctgctgatgtgcaggatggtgcagaaatgagaaccaacagcaacctgggaccacaacac
cgagcccgcagtctgcatgagaacagtatgagcaagagccgagactcagaagagcctagt
gggccacccaaaaaggaggcacgtactatgcgccagagcagccaaggaggggtgagaagt
acctcatcggcgcagccaaaaccgcgtcagtcttatccccaaggtgcaggaccaccctat
actccaccacaaacacccaccaaaacaaagcctcccacctcacaggcaatgagtaaccca
ccaagtaaacaaaaacctagcactcagctgcatcagcagaccgaaaagcccataacaact
cgtgctcacccccagtcccccactcaaaggtcccatccacacccagtgtcccagcctgtg
gaaactaaggaggctgcacctcaaggacctgctgtctcagtaccactcctgtgcctgcct
ccagaaggtgatgaagcttgcgatgagtatggtctgcccaagaaacgggcccacagcctg
aatcgctatgctgtttctgatggtgagcaggagcgggacgagctaaatgtgccagattca
ggaggaaagtatgccacagtacagaaccgggtgggtcgcagcaactcaatgaaagggcag
gcagacaaaaatgtcaaccgaagccagtcctttgcactcagacagaaaaagaagggtcct
cctccacctccccccaaacgctctagttcagccatctcgagctccagtagtaatctgaca
gaagtgcccaaggagacaagcagtggacctcttctggaggtcccctaccaaccacaaaga
cgtgcaagtgacctgggtggcactgtagacacgggcagtgccggtagtgtgaggagcatt
gcagccatgttggaaatgtcctccattggtgggggtgccaagggtctcgctttacagaag
tctgcaggtcactatctgcaggtgggttctactggaggaaagcagcgagatgctattggt
ctggatggagaagtagtgaaccgtcgcaggactattagtgggcctgtcactgagttagta
gcagctgctaagcgaggaccacagccagagccagtccaggatagacaacgcaatgaaacc
cagccaagctctagtgggagctcagcagagaatcttccatttgctgaggatggaaacctc
accatcaaacaaagacctagacagggcaaagatgagaatgaggagggactagaaatgtca
tactccttatcccaggaggaccattcacatgtggataccacagcctcactgaaaaggatg
gtccaaagcaccaagcagcaaccaaatggcaccaagttccagctaacagagtcaaataca
gttaagcgccgccccaagaacaaagacaaagatacagaagaactccaggatgggcagatg
cctgtaccatatgagaatgggactggcaccattaaaaggcgccctgtgtcagaggttaca
gtttcggagcagcccaggccacaggaacatcctgagaactcgcctcgtcgggacagtgca
gacttggaaggccatgttactgagagtgcccctcgtaagtccgtcaaacctcctgtgtcc
cccaaacctgttctggcccagcacatgaagaaacaaggaccaccggctgccatcaccaag
aaagccccatttcctggaccaactggggcacctggcagcccaggtactacacagtgcggc
cctttcacttgccctgtctttacacaattatttgagggaaagaaagtacctcctccaatt
tcaccgaaacctacacctcctcccacagcccccaaaccatccaaaaatgttctgcagtct
ttaaatgcaacacctaatcccactcccataccctctccagccaagcagactgttaccaga
atggctagcacagctcctgcccagaacaaccaccctgtcaaggctacaaccccaccagcc
ttgagtgcacagaccccacacacgccccagtctcctcacaccccacagacaccacagaca
ccccagacacctctaaccccacagacaccccaaactccccagacatcaggtcccccaaca
cccacccctacaccaccacctgtgaagccccctcgctcctcaatcagtggggtgtccatg
gacagttcaactggatcagcgtttgtcgcaggggtagtgacagtagatgcagtgcaccag
aagatagaagagaccagtgcctcactggctgcagccctgcaggcagtcgaagagaagatc
aaggaggatgggcaaaaagactcactggctgaaaacaagagcacagtgagtatcctagac
gacatcggcagcatgttcgatgacctggccgaccagctggatgccatgttggagtga
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