Puntigrus tetrazona (Sumatra barb): 122342040
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Entry
122342040 CDS
T08985
Symbol
ntn1b
Name
(RefSeq) LOW QUALITY PROTEIN: netrin-1b
KO
K06843
netrin 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122342040 (ntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
ptet00536
]
122342040 (ntn1b)
Glycosaminoglycan binding proteins [BR:
ptet00536
]
Heparan sulfate / Heparin
Axon guidance molecules
122342040 (ntn1b)
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Ortholog
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Motif
Pfam:
Laminin_N
NTR
EGF_laminin
EGF_LMN_ATRN
DUF7630
BNR_6
Thioredoxin_8
Motif
Other DBs
NCBI-GeneID:
122342040
NCBI-ProteinID:
XP_043091765
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Position
3:complement(23989577..24035666)
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AA seq
585 aa
AA seq
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MVAGARGGYGMSMFAAQSSPPDPCXRQNSNPRRCIPDFVNSAFGKDVRVSSTCGAPASRY
CVVTEKGEERSRXCNICDAADPKKSHXPAYLTDLNSPHNLTCWQSENYVQYPQNVTLTLS
LGKKFEVTYVSLQFCSPRPESMAIFKSMDYGKTWVPFQFYSTQCKKMYNKPSKAAITKQN
EQEAICTDSHTDMQPLTGGLIAFSTLDGRPSAHDFDNSPVLQDWVTATDIKVTFNRLHTF
GDENEDDSELARDSYFYAVSDLQVGGRCKCNGHASKCVKDRERNLVCECKHNTAGPECDR
CKPFHYDRPWQRATAREANECVACHCNLHARRCRFNMELYKLSGRRSGGVCLNCRHNTAG
RHCHYCKEGYYRDMTKAISHRRACKACDCHPVGAAGKTCNQTTGQCPCKDGVTGITCNRC
AKGYQQSRSPIAPCIKIPVAAPTATYSSSEEPTDCDSHCKTPKGKMKVTMKKYCKKDFAV
QVHVLKGDKAGEWWKFTINIISVYKQGGHRIRRGDQLLWVRAKDVACKCPKIKAGRKYLL
MGSDVEDSRGQNGVVADKGSLLIPWKDLWARRLRKFQQRDKRGKC
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggtggccggcgctcgcggtggatacggaatgagtatgttcgcggctcagtcctctccc
ccggacccgtgtntacggcagaacagcaaccccagacgctgcatccccgactttgtgaac
tccgcgttcgggaaagacgtgcgcgtatctagcacctgcggcgccccggcgtcgcgctac
tgcgtggtgaccgagaagggcgaggagagatcgaggnactgcaacatctgcgacgccgcg
gaccccaagaagtcgcatnnccccgcgtacctgacggacctcaacagccctcacaacctc
acctgctggcagtcggagaactacgtgcagtacccgcaaaacgtgaccctcacgctgtcc
ctggggaagaagttcgaggtgacttacgtgagcctccagttctgctctcctcgccccgaa
tccatggccatcttcaaatccatggattacgggaagacctgggtgccctttcagttctac
tcgacccagtgcaagaaaatgtacaacaaaccgagcaaagctgcgatcaccaagcagaac
gagcaggaagcgatctgcacggactcgcacacggacatgcagccgttaaccggcggcctc
atcgcgttcagcacgctggacggcagaccctccgcgcacgacttcgacaactctcccgtc
ctgcaggactgggtcacggccaccgatatcaaagtgaccttcaaccggctgcacacgttc
ggggacgagaacgaggatgactcggagctcgccagggactcgtatttttacgccgtgtcc
gacctgcaggtcggcggtcggtgcaagtgtaacgggcacgcgtcgaagtgcgtcaaggac
cgcgaaaggaacctagtgtgcgagtgcaagcacaacacggcgggaccggagtgcgacagg
tgcaagccgttccactacgaccggccgtggcagcgcgcgacggcacgagaggccaacgaa
tgcgtcgcctgtcactgtaacctacatgcccgccgctgccgctttaacatggagctgtat
aagctgtcgggccgcaggagcggaggagtctgtctcaactgcagacacaacacagccgga
cggcactgccactactgtaaagagggctactacagagacatgaccaaggccatctcgcac
agacgcgcctgcaaagcctgtgattgtcatccggttggtgcagctggtaagacctgtaac
cagacgaccggacagtgcccgtgtaaagatggcgtgactggcatcacctgcaaccgctgc
gctaaaggataccagcaaagcagatcacccatcgccccctgcatcaagattcctgttgct
gcacccacagccacctacagcagttcagaagagcccacagactgcgactcccactgtaag
acccccaagggcaagatgaaggtcaccatgaaaaaatactgcaaaaaagatttcgctgtc
caggttcacgtgctaaaaggagataaggcgggtgaatggtggaaattcaccatcaatatc
atctcggtctataagcagggcggacatcgcatccgcagaggagaccagctcctgtgggtg
cgcgctaaagacgtggcctgcaaatgccccaaaatcaaagcgggccggaagtatctgctg
atgggctccgacgttgaggactcccgcggtcagaacggggtggtggcggacaagggcagc
ctgctcatcccgtggaaggacctgtgggcccgtcggctcaggaaattccagcagcgtgac
aagaggggcaagtgctag
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