Puntigrus tetrazona (Sumatra barb): 122342234
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Entry
122342234 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
ptet04054
]
122342234
Pattern recognition receptors [BR:
ptet04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
122342234
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
PRY
LRR_6
FISNA
NOD2_WH
SPRY
Motif
Other DBs
NCBI-GeneID:
122342234
NCBI-ProteinID:
XP_043091979
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All DBs
Position
4:18646798..18655105
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AA seq
1028 aa
AA seq
DB search
MTNNQTQNQKNQTLLNSIYTHYIIEGESGGVNEDHEVLNMEKTPRIQDNPIYFNDIFKPS
NETACGSKNKIKTVFTKGIAGIGKTISVKKLILDWAEGKANQDVDFMFVLPFRELNLIRE
HQYSLHKLLLEFYPELQDLDSKTYEECKIVFIFDGLDESRITLMFEDNEKVSDVTETSSV
GVLISNLMKGELLPSALIWITSRPAAANQIPSKYINCVTEIQGFTDAQIEEYFGKRINDE
NQASTIISHIRRSRSLHIMCRIPVFCWISSTVLQKLLKEDPSAEIPQTLTEMYIHFLLIQ
INTRNQKYTEADTEKLLQFNREMILKLAELSFNQLIKGNVLFYEEDLKESSINGTDTSVY
FGICTEIFKEESVIHLRKVYSFIHLSFQEFLAAFYVVYSHLMKKREPLRYFMGDKHELRR
CNRQRYAAMRNSLCELLISAVDKTLQTKNGKLDLFLRFLLGMSLESNLDLLNELLTYTES
SLNTIKRIPLYLKDHIKTHEHLSANKCMSLFLCLLEMNDQTLYREIQDFMKSDKRLFYQF
SASHCSAIAYTLQMSEEVLDEFEMMKYRTSEECRLRLIPAVMNCRKALLAGCCLTEQQCE
TLSSALRLSNSPLRELDLSNNDLRDSGVNLLSTGLKSSQCQLNMLRLVGCNLTGQCCERL
ASALQSSRSGLRELDLSNNDLQDSGVKLLSVGLKSSHCQLNILRFALCNLTGQCCESLAS
VLQSSNSHLMELDLSNNDLRDSGIKLLSNGLKSSHCKLNTLRLSGCMVTEEGCGYVSSAL
TSNPSHLRELDLSYNHPGDSGVKLLSDLLNDPNFTLEKLNVDHGGEFRITAGLHKYFYDL
TMDPDTANTKLILSEENRKVTFVDEDQPYPDHPERFDKLPHVLCREPLSGRCYWEAEWSG
QADISLTYKGICRKGREAECVFGFNDISWCLICSEEPFALWSKYLHIDTRVAKGSCRKVG
VYVDVPAGTLSFYSVSDTLAHAHIYTFNTTFTGAVYAGVGFMVHDSNSTLTLCRSERPAN
SATDVTRE
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacaatcaaactcagaatcagaagaatcaaaccctcctgaacagcatctacacg
cactacatcatagagggtgagagcggaggagtgaatgaagaccatgaggttttaaacatg
gagaaaacacccagaatacaagacaatccaatctactttaatgacatctttaaaccctca
aatgaaacggcatgtgggagtaaaaacaaaataaagactgtttttactaaaggaatcgct
ggaattggaaaaaccatctctgtgaagaagttaattctggattgggcagagggaaaagcc
aatcaggatgtagatttcatgtttgtgctcccttttcgggagctgaatttgattagagag
catcagtacagccttcacaaacttcttctggagttttatcctgaacttcaagatctggac
tcaaagacttatgaggagtgtaaaattgtgttcatctttgatggtctggatgaaagcaga
attactctgatgtttgaagacaatgagaaagtttctgatgtaactgagacttcatcagtg
ggtgtgctgatatcgaacctgatgaaaggagagctgctaccctctgctctcatctggatc
acatccagaccagcagcagccaatcagatcccctccaagtacattaactgtgtgacagaa
attcagggatttactgacgctcagatagaggaatatttcgggaagagaatcaatgatgag
aatcaagccagcacaatcatatcacacatcagaagatcaagaagcctccacatcatgtgc
cgaatacctgtcttctgctggatctcatccactgttcttcaaaagctcctgaaagaagat
ccgagtgcagaaatccctcaaactctgactgaaatgtacatccacttcctgctgattcag
ataaacacgaggaatcagaagtatacagaagcagatacagagaaacttctgcagttcaac
agagaaatgattctgaaacttgctgaactgtctttcaatcagctgataaagggtaatgtc
ttgttctatgaggaggacctaaaagagagcagcataaatgggactgacacctctgtgtat
tttgggatttgcactgagatctttaaggaggaatctgtaattcatctaagaaaggtctat
agtttcatacatctgagctttcaggagtttctagctgctttctatgtagtttactcccat
ctgatgaaaaagagagagccattgcggtattttatgggtgacaaacatgagttgcgtaga
tgcaatagacaaaggtacgcagctatgagaaactctttgtgtgagcttctaatatcagca
gttgataaaacccttcagactaaaaatggaaagctggatctttttctgcggttcctgctg
ggcatgtcattggagtccaacctagatcttttaaatgaactgctaacatacacagagagc
agcttaaataccatcaaaagaattcctttatacttaaaagaccacatcaagacacatgaa
catctttcagccaacaaatgcatgagtctgttcctctgtctcctggaaatgaatgaccag
actctgtacagagagattcaggactttatgaaatctgacaaacgcttattttaccagttc
tctgcttctcactgctcagcgattgcctacacacttcagatgtcagaggaggtgctggat
gagtttgagatgatgaaatatagaacatcagaggagtgtagattaagactgataccagcc
gtgatgaactgcagaaaagctctacttgctggatgttgcctcactgagcagcagtgtgaa
actttgtcttcagctctgcgattatcaaattcccctctgagggagcttgacctgagtaac
aatgacctgcgggattcaggagtgaatttgctatctactggactgaagagttcacagtgc
caactgaacatgctgagacttgttggatgtaatctcactggtcagtgctgtgaaagattg
gcttcggctcttcagtcttcaagatctggtctgagagagctggacctgagtaacaatgac
ctgcaggattcaggagtgaagctgctctctgttggactgaaaagttcacactgtcaacta
aacatactgagatttgccttatgtaatctcaccggtcagtgctgtgaaagtttggcttca
gttctacaatcatcaaactctcatctgatggagctggacctaagtaacaatgacctgcga
gattcaggaataaaactgctctccaatggactgaaaagttcacactgtaaactgaacacg
ctaaggttgtctggctgtatggtgacagaggaaggctgtggttatgtgtcttcagctttg
acttcaaacccctcacatctgagagagctggatctgagctataatcaccctggagattca
ggagtgaagctgctctctgatttactgaatgatccaaacttcacactggagaaactcaat
gtggatcatggaggagagttcaggattacagcaggactacacaaatatttctatgatctc
acaatggacccggacacagcaaacactaagctcattctgtctgaggagaacagaaaggtg
acttttgtggacgaggatcagccgtacccagatcatccagaaagattcgacaagcttcct
cacgtcctgtgcagggagcctctgtctggacgctgttattgggaggccgaatggagcgga
caggccgatatatcgttgacgtataaaggaatctgcaggaaaggaagggaagcagagtgc
gtgtttggattcaacgatatctcctggtgtctgatctgctctgaagagccatttgccctc
tggagcaaataccttcacatcgacacacgcgtcgctaaaggctcctgtaggaaagtagga
gtttatgtggacgtcccggccggcaccctgtccttctacagcgtttccgacacactcgcg
cacgcgcacatatacacattcaacaccacgttcaccggagccgtctacgctggggttgga
ttcatggttcacgattcgaactccacgctgactctgtgtcggagcgaaaggcctgcaaac
agcgccactgatgtcacgcgggaatga
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integrated database retrieval system
