Puntigrus tetrazona (Sumatra barb): 122342425
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Entry
122342425 CDS
T08985
Symbol
cntn1b
Name
(RefSeq) contactin 1b isoform X1
KO
K06759
contactin 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
122342425 (cntn1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
ptet04515
]
122342425 (cntn1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ptet00537
]
122342425 (cntn1b)
Cell adhesion molecules [BR:
ptet04515
]
Immunoglobulin superfamily
Contactins
122342425 (cntn1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
ptet00537
]
Others
122342425 (cntn1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Fn3-III_PB4
Motif
Other DBs
NCBI-GeneID:
122342425
NCBI-ProteinID:
XP_043092132
LinkDB
All DBs
Position
4:6853769..6864948
Genome browser
AA seq
1029 aa
AA seq
DB search
MVTPAMLLCVLSCFFLSAAAIKPRIFEPRIFDKEATGFGPIFEEEPLDTVYAEDSPENKI
SMNCRARANPPAIIKWWLNNWEIKLMEQPDEHFSLVGGNLVITNPDKGKHSGKYVCVAKN
VYGTVISKEANVIFGFLNQFPTDEREPVHVKEGQGAVLLCSPPSRYPSEVLFRWIYNDFP
NFIIPDQRRFVSQTTGNMYIAKVEASDVGNYSCFVSSPTIGKSVFSMPIPLIPQIEKEVK
RYPADIRVKFPKTYALVHQNITLECFALGNPLPHIRWRKLDADLPPNYEVSMNGALLHLI
NVQYEDEGSYECETLNVKGMDWYRQWLYVEGAPEWAEHINDTEKDVGSELTLRCVAVGKP
LPWIRWLKDGYSYGKGELKFSSLTFEDSGMYQCVAENVWGTIYASAELRVVSCAPTFIYN
PVKKVLLGAESGRVVIECKPRAAPKPKFVWKRGSELLTNSSRMLIWDDGSLEILNLTKSD
EGSYTCYAENDRGKSNSTGTLTITEATKITAAPSDTEVVVGDTTVLQCSASFDPSLDITF
IWTVDSYVINFYTDFEHYELLMGLENSGDLLMKNIQVRHAGRYSCTAQTIVDNTTAEADV
FVKGLPGPPGGVRVEEIGDTSVKLRWSLGSDHGNSLIQHVVQTRDFYALDPEDWKTASTS
PVFLDGSTESATIVDLYPWMQYEFRVHAINEFGAGENSRPSIKIKTWDARPTVAPFEVIG
QVGISGELIVTWSPVKPQFFFGKKFGYVVAFKQHEDYEWKWSTVEDPETRRYVYKDSMTP
DTEIQVKVSTYNNKGEGPSSLISVVYSPRLAPTEAPLDVYARQVTSTEALVWWLPVYQAP
PNWVDGYQIRYWRKYDDNEAAASRIIVHRTINQTRLENMRPDSHYLIEVRAFNGAGLGPP
SEHCEMFTRRPPPSRLLRVYKYVSFNRKWLYLYWDHIYNYWNESYVEGYKILFRKEGERY
GKLYTTGRHYIDFPMPETGDYLIEVRARCEGGDGPISQIRVQGKASLGPESLSIAAVLLL
ALGLMNLGL
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atggtgaccccagccatgctcctgtgtgtgctctcctgcttcttcttatctgccgctgca
attaaacccaggatatttgaaccaagaatttttgacaaggaggccacaggctttgggcca
atatttgaagaggagcccttggacacagtgtatgcggaagattcaccagagaacaaaatc
tctatgaactgcagggcccgggccaatcctccggccattatcaaatggtggttaaacaac
tgggaaattaaactgatggagcagcctgacgagcacttcagcctggtgggaggaaacctg
gtcatcaccaacccagacaagggcaagcattctgggaaatatgtgtgtgtggctaaaaat
gtctacggcactgtcatcagcaaagaagccaacgtcatatttggattcctcaaccagttc
cctacggatgagagagagccggtgcatgtgaaggaaggacagggagcagtgctgctgtgt
tctcctccctctcgctatccaagcgaggtgttgttccgctggatctacaacgacttcccc
aacttcatcatcccagaccagaggcgtttcgtgtctcagaccactgggaatatgtacatc
gctaaagtggaggcgtctgatgttgggaattattcttgctttgtgtcaagccccaccatc
ggcaagagtgttttcagcatgcccattcctctcattccacaaatagagaaggaggtgaag
cgctatcctgctgatatccgtgtcaaattccccaagacctacgctttagtgcatcagaac
atcacactggagtgctttgctcttggaaatcctctaccacacatccgctggaggaagtta
gacgctgatctcccgcccaactacgaggtcagcatgaatggagcgttactgcacctgatt
aatgttcagtatgaggatgaagggagctacgagtgtgagacgctcaatgttaaagggatg
gactggtatcgacagtggctctatgtggaaggcgctccggagtgggcagagcacatcaat
gacacagagaaagacgtcgggagtgagctcactctcagatgtgttgctgtggggaagcct
ttgccatggatacgctggctgaaggacggctactcgtacggcaaaggggagctgaagttc
tccagtctcacgtttgaggactcggggatgtatcagtgcgtcgctgagaacgtatggggg
accatctatgccagcgcagagcttcgtgtcgtctcctgtgcgccgacgttcatttataac
ccggtgaaaaaagttctgctcggggctgaaagcggacgtgtggttatagagtgcaaaccc
cgcgctgctcctaaacccaagttcgtctggaaacgaggctcggagctgctgaccaactct
tcgaggatgctcatttgggatgatgggagtctggagattctgaacttgacaaaaagtgac
gagggctcttatacatgctacgctgagaatgaccgtggcaaatccaacagcacagggacc
ctcactatcaccgaggccactaaaatcacggcggctccgtctgacactgaggtggttgtg
ggtgacactacggttctccagtgctctgcatcctttgaccccagcctggacatcaccttc
atctggaccgtcgattcctacgtcatcaacttctacacagacttcgaacactacgagctg
ctcatgggtctggagaacagtggagacctgctgatgaagaacattcaggtgaggcacgca
ggacgctattcctgcaccgctcagactatagtggacaacaccaccgcagaagctgatgtc
ttcgtcaaaggcttgcctggtcctccgggcggtgtccgtgtggaagagattggagacacg
tcagtaaaactacgatggagtctgggatcagaccacggcaattctcttattcaacatgtc
gtacaaacacgagacttttatgctctggatcccgaggactggaaaactgcatccacctct
cctgtgtttttggatggatctacggagtctgccaccatagttgacctttacccctggatg
cagtatgaattcagagtgcatgccatcaatgaatttggagcaggagaaaacagccgtcca
tccatcaaaatcaagacatgggacgccaggcctacagtcgctccttttgaggtcattggg
caagtgggaataagcggagagctcatcgtgacctggagtcctgtaaagcctcagttcttc
ttcggtaaaaaatttggctacgtcgtggcgttcaagcagcatgaggattatgaatggaaa
tggtcgactgtggaggatccagagactagacgctacgtctacaaagacagcatgaccccg
gacactgagatacaggtcaaagtgagcacctacaataacaaaggagaaggaccctcgagt
cttatatcggtggtctactcaccaaggcttgcgccgactgaggctccattagacgtctac
gcccgtcaggtcacctctacagaagctttggtctggtggttaccggtctaccaggcgccg
ccaaactgggtcgacggataccagattcgttactggaggaagtacgatgacaacgaggcc
gctgcctctcgaattattgtgcacagaacaattaaccaaacgcgcctggagaacatgcgg
cctgactcccactacctcatagaggtgcgggcgttcaacggagctgggctcgggccaccc
agcgaacattgtgaaatgttcaccaggagaccacccccaagtcgcctattgagagtctac
aaatatgtcagcttcaatcgcaaatggctttatctgtattgggatcacatctacaactac
tggaatgagtcttatgtagagggatacaaaattttgttcaggaaggaaggagagcgttac
gggaagctttacaccacgggcaggcactacatagactttcccatgccagagacgggcgat
tacctcatagaggtccgagcgcgctgtgagggaggtgacggacccatatcacagatcaga
gtacaaggcaaagcctctctgggcccggagtctctcagcatcgccgctgtcttgctgctg
gcactgggcctgatgaatttaggcctgtag
DBGET
integrated database retrieval system
