Puntigrus tetrazona (Sumatra barb): 122342440
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Entry
122342440 CDS
T08985
Name
(RefSeq) POU domain, class 2, transcription factor 2 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122342440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122342440
03021 Transcription machinery [BR:
ptet03021
]
122342440
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122342440
Transcription machinery [BR:
ptet03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
122342440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pou
Homeodomain
HTH_31
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
122342440
NCBI-ProteinID:
XP_043092162
LinkDB
All DBs
Position
4:27665105..27711406
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AA seq
701 aa
AA seq
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MFVPLPVPLVFQRTAPDFSAWRLKSPLPLRSGNSVDIRMSKAVEDDKMGTELPVDSTDSE
RNSPEASDQTQPMKTSPFCLSPAPSNTKVKAEEAAEMTSVHAPPPPPAQPALPHTQLMLA
GSQLAGLAALLPAQQQLLLQQAQAQLLAAAVQQSNAAHAAHAAAAANQQQTQQQQANQAA
AQAQSQAKPEQAPPPLLSQPIQLTAQAFCLSLQDIQQLLQLQQLVLMPGHPLQSPAQFLL
PQAQAQQGQQGLLSTSNLIPLPQQSPGSLLTSPPRLGLQAQHHLDDRLWSLQREKSVESA
VSSAPSSAPPMSSVPTVTAHAEEPSDLEELEQFARTFKQRRIKLGFTQGDVGMAMGKLYG
NDFSQTTISRFEALNLSFKNMCKLKPLLEKWLSDAETMAIDNMLPSPSSLSSPLLGFEGL
PGRRRKKRTSIETNVRIALERNFISNQKPTSEEILLMAEQLNMEKEVIRVWFCNRRQKEK
RINPSSATPPLPSQPPAPTHKPPCYSPHMMSSQGLVQAATSLSTTAVSPTPSMACPLNPS
GHAVMSSAPSSVTPPPLSTVSPTPPSLSSPGLNTGNTMLGVSTGMNQALISSNPLATMQA
LAASGGQMPISALEGSGQMFLGGAGGPGAGLRPSLFLNRPTLLPLARSAGMGLVGTPRAS
PPPGASGTSPDSCSVSPCSSPASFCSLGDASPPHLGGAMAE
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttcccttgccggtgccgttggtgtttcagagaaccgctcctgatttcagcgcc
tggcgactcaagtctccgctgcctctgcgctccggtaactccgtagatatcaggatgtct
aaagccgtggaggacgacaagatggggactgagctcccagtggacagtacagactctgag
aggaacagtccagaggccagcgatcagacccagccgatgaaaacaagtcctttctgcctg
tctcccgcacccagcaacacaaaggtgaaagccgaggaggccgctgagatgaccagtgtt
cacgctcctccacctcctccagctcagccggctctgccacacacacaactcatgctggca
ggcagtcagctcgcagggctggccgctctcctccctgcacagcagcagctgttgttgcag
caggctcaagcgcagctgttagccgcagccgtgcagcagtcgaacgccgcgcatgccgcc
cacgcagccgccgcggccaatcagcagcagacgcagcagcagcaggccaatcaggcagca
gcacaagcccagtctcaagccaaacccgaacaagctccgcctccacttttgtcacagcct
atccagctcactgcccaggctttctgtctgtctctgcaggacattcagcagttactgcag
ttacagcagctggtcctgatgcccggtcatcctctgcagtctccggctcagttcctgctt
cctcaagcccaggctcagcagggtcagcaaggtttgctgtcaacatcgaatttgattcca
ctacctcagcagagcccagggagtcttctgacctccccacctagactgggccttcaagca
cagcatcatcttgacgacaggctgtggtcattgcagagggagaagagcgtggagagcgcc
gtgagctccgccccctcctcagccccgcccatgagctccgttcccacggtgacagctcat
gccgaggagcccagcgatttggaggagcttgaacagttcgccagaaccttcaaacagagg
agaattaaactgggcttcacacagggggacgtgggtatggccatgggtaagctctacggc
aatgacttcagtcagaccaccatctcacgcttcgaggctctcaacctcagcttcaagaac
atgtgcaagctcaaacccttactggagaaatggctgagcgacgcagaaaccatggcgata
gacaacatgctgccgagccccagctctctgtcttctcctctgctgggcttcgaaggtttg
cctggacgccgccgaaagaaacgcaccagcatcgagaccaacgtccgcatagccctggag
cgcaacttcatctcgaaccagaagcctacctctgaagaaatcctgctgatggccgagcag
ctcaacatggagaaagaggtcatccgagtctggttctgcaaccggcggcagaaagagaag
cgcataaaccccagcagcgccacccctcctctgcccagtcagcctccggcgcccacgcac
aagccgccctgctacagcccgcacatgatgtccagtcagggactggttcaggccgctacc
agtctcagcacaacagctgtcagtcccacaccttctatggcctgccctctcaaccccagt
ggacatgcagtgatgagctccgccccttcctctgtgactccgcctcctctcagcacagtc
agcccgactccgcccagtctcagcagccctggtctgaacacagggaacacaatgctgggt
gtaagcacaggaatgaaccaggccctcatcagcagcaaccctctggccacaatgcaagcc
ctggctgccagtggtggccagatgcccatttccgctcttgagggcagcggtcaaatgttc
ctgggtggagctggaggtccaggagctggacttcgcccgtccctcttcctaaaccgcccc
actttactgcccctggcaaggagcgcaggcatgggtctggtcggcacccctagggcttct
ccgcctcctggcgccagcggcacaagcccagactcctgctccgtgtctccctgctcaagc
cccgcctctttttgctcgttaggcgatgcctcgccgccccatctgggcggagccatggct
gagtga
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integrated database retrieval system
