Puntigrus tetrazona (Sumatra barb): 122342514
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Entry
122342514 CDS
T08985
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase NEDD4-like
KO
K13305
E3 ubiquitin-protein ligase NEDD4-like [EC:
2.3.2.26
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04120
Ubiquitin mediated proteolysis
ptet04144
Endocytosis
ptet04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122342514
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122342514
09144 Cellular community - eukaryotes
04530 Tight junction
122342514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122342514
04121 Ubiquitin system [BR:
ptet04121
]
122342514
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122342514
Membrane trafficking [BR:
ptet04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122342514
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
HECT type E3
122342514
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
Dynamin_N
Dynamin_M
MMR_HSR1
URGCP_GTPase
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
122342514
NCBI-ProteinID:
XP_043092287
LinkDB
All DBs
Position
1:complement(6533501..6544558)
Genome browser
AA seq
677 aa
AA seq
DB search
MEKMSYTFSQQYEEKIRPCIDTIDNLRSLGVEKDLALPAIAVIGDQSSGKSSVLEALSGV
ALPRGSGIVTRCPLELKMIRSKDEDKWHGRISYQDIQEDIHDPAEVEKKIREAQDEMAGV
GVGISDELISLQITSANVPDLTLIDLPGIARVAVKGQPENIGDQIKRLIRKFVTKQETIN
LVVVPCNVDIATTEALKMAQEEDTEGERTLGILTKPDLVDKGTEETVVDIVHNEVIHLTK
GYMIVRCRGQKEILDQVTLNEATETEKAFFKDHPHFSKLHEEGFATIPKLAEKLTIELVH
HIQVKKKIYIADIPNRFEMKLHRNNILEESYRRIMSLKRPDSLKARLWIEFESEKGLDYG
GVAREWFFLLSKEMFNPYYGLFEYSATDNYTLQINPNSGLCNEDHLSYFKFIGRVAGMAV
YHGKLLDGFFIRPFYKMMLGKQITLNDMESVDSEYYNSLKWILENDPTELDLRFCIDEDN
FGQTYQVDLKPSGSDMVVTNDNKKEYIDLVMQWRFVDRIQRQMTAFKEGFYELIPQDLIK
IFDENELELLMCGLGDVDVNDWRENTKYKNSYNSNHPVIIWFWKTVLLMDAEKRIRLLQF
VTGTSRVPMNGFAELYGSNGPQLFTIEQWGTRDKLPRAHTXAHTCFNRLDLPPYPSFSML
YEKMLTAVEETSTFGLE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atggagaagatgagttacacgttcagtcagcaatatgaggaaaaaatccgtccttgcatc
gacaccatcgacaatctacggtctctgggagtcgaaaaggacctggcgctgcctgccatc
gccgtcattggagaccaaagctcggggaagagttcagttctcgaggcgctgtctggagtg
gcgttacccaggggtagtggaattgttacaagatgtcctcttgagctcaagatgataaga
agtaaagatgaagacaaatggcatgggagaatcagctaccaggacatacaggaagatatt
catgatccagcagaagtggagaaaaagatccgtgaagctcaggatgagatggctggagta
ggtgttggtattagtgatgaactcatcagtctgcagatcacctctgccaatgtccctgac
ctcactctcattgacctccctggtatcgcacgagtggctgtcaaggggcaaccggagaat
attggggatcagattaagagactgatcaggaagttcgttacaaagcaagaaacgattaac
ctggtcgtggtgccatgcaatgttgacatcgcaaccacagaagcgttaaagatggctcag
gaggaggacactgaaggcgaaagaacattaggcatcttaacaaagccggatctggtggac
aagggcaccgaagagacagttgtagacattgtgcacaatgaggtcattcaccttactaaa
ggttacatgattgtgaggtgcagaggacaaaaagagattttagatcaagtcactctcaat
gaggccacagaaacagagaaagccttcttcaaagatcatcctcatttcagcaaacttcat
gaagaaggtttcgctactattcccaagttggctgagaaattaacaattgagctggttcat
cacattcaggtaaaaaaaaaaatatatatagcagatattccgaaccgttttgagatgaag
ctacacaggaataacatcttggaggagtcttacagacgaatcatgtccctgaagagaccc
gacagtctaaaggctcgtctctggattgagtttgaatcggagaaaggcctggactacggg
ggagtggccagagaatggttcttcctgctctccaaggagatgtttaacccttattatggg
ttgtttgagtactcagccacagataactacacgcttcagatcaatccaaactccggcctc
tgtaatgaggatcacctctcatacttcaagttcatcggtcgagtggccggcatggctgtg
tatcacggaaagctgttagacggtttcttcattcgaccgttctataaaatgatgctgggc
aagcagatcacgctgaatgatatggagtcagtggacagtgaatactacaactctctaaag
tggattctggaaaacgaccccactgaactggacttgcggttctgcattgatgaggacaac
ttcggacagacgtatcaggttgatttgaagccaagtggatcagacatggttgtaaccaat
gacaacaagaaagaatatatagatctggtgatgcagtggaggtttgtagaccggatccag
agacagatgacggccttcaaagagggtttctatgagctgatacctcaggacctgatcaag
atctttgatgaaaatgagctggagctgctgatgtgtggcttaggagacgtggacgtcaac
gactggagagaaaacaccaaatacaaaaacagctacaactcaaatcaccctgttatcatc
tggttctggaagacggtgttgctgatggatgcagaaaagcgaatccgtttgctgcagttt
gtgacgggaacgtcccgcgtcccgatgaacggcttcgctgagctctacggatccaatggg
ccgcagttgttcaccatcgaacagtggggcacgagggacaagctgcccagagcgcacacc
tgagctcacacgtgtttcaatcgtctggacctccccccgtacccctcgttctccatgctg
tacgagaagatgctgacggcagtggaggagaccagcactttcggtttggagtga
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