Puntigrus tetrazona (Sumatra barb): 122342519
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Entry
122342519 CDS
T08985
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122342519 (mkrn1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122342519 (mkrn1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122342519 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_2
zf-CCCH_3
zf-RING_UBOX
zf-RING_2
zf-C3HC4
zf-ANAPC11
zf-rbx1
zf-C3HC4_4
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122342519
NCBI-ProteinID:
XP_043092290
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All DBs
Position
4:6044883..6054197
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AA seq
438 aa
AA seq
DB search
MAEAAAASTAAPAVIGGWTKHVTCRYFMHGLCKEGDNCRYLHDLSSCKPTMICKFFQKGC
CAFGDRCRYEHTKPAKQDEVPSSKPPVPLTAAPLAGTPDPVSDGPGGTTDAQEKPQGSGA
VDWVNAAEFVPGQPYCGRADPVPLEGPGPLIEEEYEKELANKEMKKQLCPYAAVGECRYG
LNCAYLHGDVCDMCGLQVLHPSDTSQRSQHIRACIEAHEKDMEISFAIQRSKDMMCGVCM
EVVFEKTNPSERRFGILSNCSHCYCLKCIRKWRKAKQFESKIIKSCPECRITSNFVIPSE
YWVEDKEEKQQLIQKYKDGMGSKPCRYFDEGRGTCPFGANCFYKHAFPDGRLEEPQPQRR
QTGSNGRTRNSRRTPLWDLFDERENSDSFDNEDEMVTFELSEMLLMLLAAGTDDDVTDSE
DEWDLFHEELDDYYELYL
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcagcgtcaacagcggctccagcagttatcggaggctggacgaag
cacgtaacctgcaggtatttcatgcacgggctttgcaaagagggcgacaactgtcgatat
ttacacgacctcagcagctgcaagccaaccatgatctgcaagttctttcaaaagggatgc
tgtgcttttggggaccgttgcaggtatgaacatactaaacctgccaagcaagacgaagtc
cctagttctaagccgccggtgccgctgaccgctgctccccttgctggcactcctgatccc
gtgtctgatgggccaggtggtacgaccgatgcccaggagaagccccaaggctcgggggca
gtggactgggtcaatgctgccgagttcgtgccagggcagccctactgtgggagggctgat
ccagtgccgctcgaggggcctggacctctcatcgaagaagagtatgagaaagaactagct
aacaaagaaatgaagaaacagctttgcccgtacgccgccgttggcgaatgtcgctatggc
ctcaactgcgcctacctccacggcgacgtttgtgacatgtgcggcctacaggttctccac
ccttccgacacctctcagcgctcgcagcacatcagggcctgcattgaggctcacgagaag
gacatggaaatttcttttgccatccagcgtagtaaagacatgatgtgtggagtgtgcatg
gaggtggtgttcgagaaaaccaaccccagcgaacgccgtttcggcatcctctccaactgc
agccactgttactgcctcaagtgcatcaggaaatggcggaaggccaagcagttcgagagc
aagatcataaagtcttgcccagagtgtcgaatcacatcgaactttgtcataccaagcgaa
tactgggtggaggacaaggaggagaagcagcagctcattcagaagtacaaggatggcatg
gggagtaaaccctgccgatattttgatgaaggccgtggaacctgtccgtttggagccaac
tgcttttacaagcatgcctttcctgacgggcgtctggaagagcctcaaccccagaggaga
cagaccggttccaacggaagaacccggaactccagacggacgccactctgggatcttttc
gacgagcgggagaacagtgactccttcgacaatgaagatgagatggtgacgttcgagctc
agcgagatgctcctcatgcttctggccgccggaaccgacgatgatgttaccgactccgaa
gatgagtgggacttgttccacgaagagctggacgattactacgaactgtacctatag
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