Puntigrus tetrazona (Sumatra barb): 122342542
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Entry
122342542 CDS
T08985
Symbol
tnpo3
Name
(RefSeq) transportin-3
KO
K15436
transportin-3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
ptet03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122342542 (tnpo3)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
122342542 (tnpo3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122342542 (tnpo3)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA transport factors
tRNA import factors
122342542 (tnpo3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_TNPO3_IPO13_4th
TPR_TNPO3_IPO13_3rd
TPR_TNPO3_IPO13_2nd
Xpo1
IBN_N
Importin_rep_3
Motif
Other DBs
NCBI-GeneID:
122342542
NCBI-ProteinID:
XP_043092321
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All DBs
Position
4:6762781..6775811
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AA seq
923 aa
AA seq
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MEGGKPTLPLVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWEISDQLLQLKQDVESC
YFAAQTMKMKIQTSFYELPPETHTSLRDSLLSHIQNLKDLSPIIVTQLALAIADLALQMA
SWKGCVHTLIEKYSNDVSSMPFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSTTV
VTLLVTCAEKSGHDEKMLIKVFRCLGSWFNLGVLDNNFMASNQLLMILFQVLQRDETSTN
LHEAASDCVCSALYAIENVAVHMPLAMQLFQGVLSLETAYHMAVAREDLDKVLNYCRIFT
ELSETFLEMTVRTPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGEHLYKMNDPA
LHRVFKPYIQRLLHSLARHCQLDPDHEGVPEDTDDFGEFRMRVSDLVKDVIFLVGSMECF
SQLYSTLREGNPPWEVTEAVLFIMASIAKSIDPENNPTLTEVLEQVVLLPETVHLAVRYT
SIELVGEMSEVIDRNPCMLDPVLNFLMKGLREKPLASVAAKAIHNICSVCRDHMAQHFQG
LLNIARSLDSFALSTDAAVGLLKGTALVLARLPLEKIAECLNDLCAVQVMALRKLLAQDS
SSGKSSDPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNAHQNDNRIVE
RCCRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQG
LLDMLQALCMPTFQLLEQPNGLRNHPDTVDDLFRLATRFVQRSPVTLLNSSIIVHIIQCA
IAATTLDHRDANCSVMKFIRDLIHTGVTNDHEDDFEMRKRLIGQVMEQHGQQLVTQLINT
CCFCLPPYTLPDVAEVLWEIMVFDRPTFCRWLETALKGLPKETAGGAVTVTHKQLTDFHK
QVTSAEECKQVCWAIREFTRLYR
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcgggaaacccaccctgccgctggtttaccaggcggtgcaagcgctgtatcac
gacccggaccctgccggcaaggagcgcgcctcggtctggctgggagagctgcagagatcg
atgtatgcatgggagatctcggatcagctcctgcagctgaagcaggacgtggaatcgtgt
tactttgcagcccaaacaatgaagatgaagatccagacgtcgttctacgagcttccccca
gagacccacacctcactgagagattccctcctgtctcacatccagaacctcaaagacctg
tctcccatcatcgtcacacagcttgcattggcaatcgcagatctggctcttcagatggcc
tcgtggaagggctgcgttcacaccctcatagaaaaatacagtaacgacgtgtcctcgatg
cctttcctgattgagatcctcaccgttttgccagaggaggtgcacagtcgctctttgagg
atcggagccaatcggcggacggagatcattgaggatctggcctactactccaccacagtc
gtcactcttctggtgacgtgtgcagagaagtccggacacgacgagaagatgcttatcaag
gtgttccggtgtttggggagctggttcaatttaggagtgctggacaacaacttcatggcc
agcaatcaactgctgatgattctcttccaagtgctgcagagggacgagacgtccaccaac
ttgcatgaggcggcatcggattgcgtgtgctcggcgctgtacgccatcgagaatgtggcc
gtacacatgcctttggccatgcagctcttccagggagtcctctctctagaaacggcctac
cacatggctgtagcccgcgaggacctcgataaggtgctaaattattgccggatctttacg
gaattgtccgagacatttttggagatgaccgtaaggactcctggccagggcatgggagat
ctacgcaccttagagttgctgcttatttgtgcaggccatccccaatacgaggttgttgag
atctcgttcaacttctggtaccggctaggagaacatctttataaaatgaacgatccggct
cttcacagagtgttcaagccgtacatacagagattactgcacagtctcgcccgccactgc
cagctcgacccagatcacgaaggagtcccagaggacacggatgattttggggagttcagg
atgagagtgtctgatctcgtaaaagatgtaattttcctagtcggctccatggagtgtttc
tcacagctgtattcaactctgagggagggaaaccccccatgggaagtaactgaggctgtt
ctgttcatcatggcttccatagctaagagtatcgatcctgagaataatcccactctgacg
gaggtgctggagcaggtagtgttgcttcccgagacggtccaccttgccgtccgctacacc
agcatcgagctggttggcgagatgagcgaagtaatcgaccggaacccttgcatgttagat
cctgtattgaacttcctgatgaagggtttgcgggagaagccgttggcctctgtggcagct
aaagccattcacaacatctgctcggtgtgtcgagatcacatggcacagcacttccagggc
ctgctgaacatcgcccgctcgctcgactcattcgccctgtccacggatgctgcggttggc
ttactaaaaggcacagcgctggtattggcccgcctccccctggagaagattgcagagtgt
ctgaacgatctgtgcgcggttcaggtcatggcactgaggaagctgctggctcaggactcc
agtagtgggaagtcatcagacccgactgtgtggctggacagactggctgttatcttcaga
cacacaaaccccatagtagagaatggacagacacacccctgccagaaagtcattcaagag
atctggccggtgttgtctgagacattgaacgcccaccagaatgataaccggatagtggag
cgctgctgccgttgcttgagatttgcagtacgttgcgtaggcaaaggctctgcttccctt
ttacagccgcttgttactcagatggtgagtgtgtaccaggtgtaccctcactcctgtttc
ctgtacctgggcagcattctagtggacgagtatggcatggaggagggatgcagacaaggc
ctgttggatatgctgcaggctctctgtatgccgaccttccagctgttagagcagccgaat
ggtctgcgcaatcatcccgacacagtggacgatctttttagactcgccacaaggtttgtc
cagcgtagtccggtcacgttgctgaacagcagtattatcgtccacatcatccagtgtgcc
atcgctgccaccaccctggaccatcgagatgccaactgcagcgtcatgaagtttatcaga
gacctcattcacaccggggtcaccaatgaccatgaggacgactttgagatgcgaaagcgt
ctgattggccaggtgatggagcagcatgggcagcagctagtgactcagctgatcaacacc
tgctgtttctgcctgccgccttacactctgcctgacgtggcggaggtactctgggagatc
atggtctttgatcggccgacgttttgccgctggctggaaactgcactgaagggtcttcca
aaagaaacagcaggaggcgctgtaaccgtcacacacaagcagctcaccgacttccataag
caggtcacgagtgcagaggaatgtaaacaggtttgttgggcgataagagagtttaccagg
ctgtaccgatag
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