Puntigrus tetrazona (Sumatra barb): 122342556
Help
Entry
122342556 CDS
T08985
Symbol
lamb1b
Name
(RefSeq) laminin subunit beta-1b isoform X1
KO
K05636
laminin, beta 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122342556 (lamb1b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122342556 (lamb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
GrpE
Motif
Other DBs
NCBI-GeneID:
122342556
NCBI-ProteinID:
XP_043092365
LinkDB
All DBs
Position
4:13326365..13345061
Genome browser
AA seq
1795 aa
AA seq
DB search
MGGSSASPTLLSSGKHYWRTTATMWILQITALSISIALRALAQLPDHNDKCAEGSCYPAT
GDLLIGRAHRLAASSTCGLDGAERFCIVSHLQDAKDCFECDSRRMYNEFTNPDSHTIENV
VTTFTPNRLKTWWQSENGVENVTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSADYGRS
WQVYRYYAFNCAESYPRVPQGPIRKVDDVICDSRYSAIEPSTEGEVIFKALDPAFKIPDP
YSPRIQNLLKITNLRVRMEKLHTLGDDLFDDRDGVKEKYYYALYDMVVRGNCFCYGHASK
CAPVGNEAGVEGMVHGHCMCNHHTTGLNCEECEEFFQDLPWRPAVGRETNACKRCECNHH
SYSCHFDMAVYLSSGNKSGGVCDDCQHNTEGQWCENCKPFYYKHSGRNIRDPRICEPCDC
DPRGSLNGGLCDSATDVLRDTIAGQCRCKANVEGQRCDHCKKGHYGLGDDPLGCRSCSCN
PLGTLPAGSPCDIQTGSCYCKRLVTGRNCNQCLPQHWGLSNDMDGCRPCDCDVGGALNNN
CSQETGQCACKKHMFGRRCDQMHSGYYFAGLDHYIYEAEDASFGPEVKVLQRPLPLDRKP
TWTGKGFANVPEGETLRFNIYNLPRSMEYNLMIRYEPLLPDEWEQVVVQIERPRGTYPAA
HCTSTYDDEQTVSLHPGSRYVVLPGPVCLEKGQNYTVKISFPQYSSYSYHSSPHTLVDSI
VLLPEVQDLDLFSGGPQQQEDWEMFQKYRCMERSQSVIKIPLTDICRDYIFSVSALLHNG
ALECKCDPQGSLSTVCDGIGGQCQCRPNVLGRNCNTCAPATYLFGPSGCRPCDCNPLGSQ
NLFCHPTTGQCPCVPGAYGRQCGSCKPNHWGFPQCQPCFCNRNSEQCHPVTGECLNCRGH
TTGHSCERCESGYHRNTLLGSSEQCRPCMCPNGPGSGMQFAESCYQNPSSLQMVCVCSSG
YKGLKCEECASGYYGNPQVPGRRCHPCQCNGNINMQDPESCDARTGACLKCLFHTDGDAC
QYCSRGYYGDARTQSCRRCMCHLVGSSRQRCVDGLCECDRVSGQCPCLPGVVGLHCDRCA
PNTWDINSGKGCQPCRCHPQHSHTTSCDLLTGQCSCKPGFGGRTCEECRELFWGNPEVQC
RACDCDPRGIAAQQCNKTSGECVCVEGVAGRRCDSCGRGYVGTFPDCEACHLCFREWDVN
VGELTNHTQRLVDTVEEIKETGVATPYKDIISSLDDETRQLRQILEDDRVQQTLTHVKMT
LKQANETTSLLRKSIDRSETDLEKVSADHQQTVENLKGLTEEAQNLQEISSDKQQQILNI
KHSDPRGAADGIREYFRKSGVAEFRVNQAVSDPGSTVKESAQIRKAAEAKLDSTEKEFNL
KHQLHLQRLEKIDSELDSADLSRLSHQVCGGASGVDGCGSCGGLGCVSEDGTSQCGGEGC
ETIQTRSQKALTVAKTSDQEVLHALNEVDKLNKMVSDARGRADEAKLSAQDVLLRANQSK
ARVEQTNEDLRDLIQQIRDFLTNETDPKRIEEVADEVMKLSLPVSPGALKNVTTEIRHHV
ARLTQVDDILSQTAENAYNAERLLQEAQAANERATALKQATDKTRETLEDTERAQTAAGE
KLKEVERDMNQTKLQNADVQSKIEATEFELSSSTGRFLDLERKLEELQQKTPETSRSADE
TQRQTEYIEAEIKRTEGEFDSLVQPKYQLASGLIDQKAAGVVDARQKAEQLRQEAKDLLK
DATSKLQRLRELERSFVENQNILAEKAQDLDGLEDKARDVLQELSQKVAIYSTCA
NT seq
5388 nt
NT seq
+upstream
nt +downstream
nt
atgggcgggagctccgcttctcccacgctcctcagctctggaaaacattactggagaacg
acagcgacaatgtggatcctccagattacagctctctcgatatctattgctttgcgcgcc
ctggcgcagttacccgatcacaatgacaagtgtgcagaggggagctgttaccccgctaca
ggcgacctgctgataggaagagcacaccgccttgcagcctcctccacctgcggactggac
ggggccgagagattctgcattgtgagccatttacaggatgcgaaagactgttttgaatgc
gattctcggcggatgtacaatgagttcaccaaccccgacagccacaccattgagaatgtg
gtgacgaccttcactcccaaccgcctcaaaacctggtggcagtccgagaacggagttgaa
aatgtgaccattcagctggatttggaagccgaattccactttacgcacctcatcatgacc
tttaagacctttcggccggcagccatgctgattgagcgttctgcagattatggccgaagc
tggcaggtgtaccgttactacgctttcaactgcgctgaatcctatccgcgcgtccctcag
gggccaatcagaaaagtggatgatgttatttgtgacagccgctattcggccattgagcca
tccacagaaggagaagtcatttttaaggcgcttgatcccgcgtttaagattcctgaccct
tacagcccacgtattcagaacttgctgaaaatcacaaacctgcgcgtacggatggaaaag
ttgcacactctaggtgatgatctgtttgacgaccgagacggggtgaaagagaaatactat
tatgccctctacgatatggtcgtccgtggcaactgtttctgctacggccacgcctccaag
tgtgcaccagttggcaatgaggcaggggtcgagggcatggttcacggtcattgcatgtgt
aatcaccacactaccggactgaactgtgaagagtgtgaggaatttttccaagatctgccc
tggagaccggcagtgggccgagagacaaatgcgtgcaagagatgcgagtgcaaccatcac
tcgtattcgtgtcactttgacatggcggtgtatctgtcatcgggaaataagagcggagga
gtgtgcgatgactgtcagcacaacacagagggccaatggtgtgagaactgcaaacccttt
tactacaagcactctggcagaaacatcagagaccccaggatctgcgagccctgcgattgt
gacccacgcggttctctgaacggaggcttatgcgacagcgccacggatgttctgagagat
acgattgccggacagtgccgttgcaaagccaacgtggagggacagcgttgtgaccactgt
aaaaagggacattacggcctcggggacgacccattgggctgtcgctcatgcagctgtaat
cctctaggcacactccctgcgggaagcccttgcgatatacagacaggaagctgttactgc
aaacgtcttgtgactggacgaaactgtaaccagtgtctgccgcagcactggggtctcagt
aatgatatggatggctgcagaccatgtgactgcgacgtaggcggggctttgaataataat
tgttctcaggagacaggacagtgtgcttgtaagaagcatatgtttggtaggcgatgtgac
caaatgcattctgggtattactttgcgggactggaccactatatttacgaagccgaggat
gcttccttcggaccggaagtaaaagtgcttcagaggccgttgcctttggatcgcaaaccg
acctggacgggtaaaggatttgcgaatgtaccagagggcgaaacgctgaggttcaacatt
tacaatttaccacgatctatggagtacaacttaatgatccgctatgaaccactgttgcca
gatgaatgggagcaggttgtggtgcagattgagcggcccagaggcacttacccagcagca
cactgcacttctacgtacgatgatgaacagaccgtctcgttgcaccctggatctagatat
gtagttctacccggtccagtgtgtttggaaaagggtcagaattacacagtaaaaatcagc
ttcccacagtattcatcatacagctatcactcttctcctcacacacttgttgattcaata
gtgcttttgccagaggtgcaagacctggatctgttttctggcggaccccagcagcaggaa
gactgggagatgttccagaaatacagatgcatggaacgcagccagagtgttattaaaatc
cccctgacggatatttgcagagattacatcttcagcgtgtcagcactgctacacaatgga
gctctggaatgtaagtgtgacccccaaggttcactgagcaccgtgtgtgacggcatcggc
gggcagtgtcagtgtcgccccaacgttttaggaaggaactgcaacacttgtgccccggcc
acctacttgttcggaccctcgggatgtagaccatgtgactgtaaccccctgggctctcag
aacctgttctgccaccccaccacgggccagtgtccatgtgtgccaggggcgtacgggcgg
cagtgcggcagctgcaagcccaaccactggggcttccctcagtgccagccctgcttctgt
aacaggaacagtgagcagtgccaccctgttacgggcgagtgtctgaactgcaggggtcac
accacaggccacagctgcgagaggtgtgaaagcggttatcaccgcaacacactactgggc
tcaagcgagcagtgccgcccttgcatgtgtcctaacggaccaggaagtgggatgcagttc
gctgagagctgttatcagaatccaagttctctccaaatggtgtgcgtctgcagctcaggc
tacaaaggactcaagtgtgaggaatgcgcctctggttattacggcaacccccaggtaccg
ggaaggagatgccatccgtgtcagtgtaacggaaatattaacatgcaggaccccgaatcg
tgtgacgcccgaactggtgcctgcctcaaatgcctgtttcacaccgacggcgatgcgtgc
cagtactgcagccgcggttattacggagacgcccgtactcagagctgcaggagatgcatg
tgccatctcgtgggaagttccaggcaaagatgcgtggacggcttgtgcgagtgcgaccgg
gtcagcggccagtgcccgtgtctgcccggcgtggtgggtctgcactgcgaccgctgcgcc
cccaacacatgggacatcaacagcggcaaaggatgccaaccttgccggtgccacccccag
cattctcacacgacctcgtgcgatctgctgaccggtcagtgttcctgcaagcccggtttt
ggaggcaggacgtgcgaggagtgcagggagctattttgggggaacccagaggtccagtgc
cgcgcatgcgactgtgacccacgaggcattgctgctcagcagtgtaataagacgagcggc
gagtgcgtgtgcgtagagggtgtagccgggcggaggtgtgactcgtgcggacgaggctac
gtcgggacctttcccgactgcgaggcctgccatctgtgtttccgcgaatgggacgttaac
gtgggagagctgaccaatcacacgcagaggctggtggataccgtggaggaaattaaagag
accggtgtggctacgccctacaaagacatcatatcgagtctggacgatgaaactagacaa
ctcaggcagattctggaagacgacagagttcagcaaacgctcacgcacgtgaagatgacg
ctaaagcaagccaatgagacaacatccctcctgagaaagtctattgatcgatctgaaaca
gatctggagaaggtatctgctgaccatcagcagaccgtggagaacctaaaaggcctgact
gaggaggcccaaaacctacaagagatctcctctgacaaacagcagcagattctgaatatt
aaacattcggaccccagaggtgctgctgacggcatcagagaatatttcaggaaatccggt
gtggcagagtttcgcgtcaatcaagccgtctctgacccgggaagcacagtcaaagagtct
gcccagatacggaaagccgcagaggccaaactagacagcactgagaaagaatttaacctg
aaacatcagctgcatttacagaggctggagaaaattgattctgaactggactcagcagac
ctttcaagactaagccatcaggtgtgtggaggggcgtcaggtgtagatggctgcggtagc
tgcggtggtctgggatgtgtgagcgaggatggcacgtcccagtgtggcggggaaggatgt
gagactattcagacacgatcccaaaaggccttgactgtagccaaaacctcagaccaagag
gtcttgcatgctttaaacgaagtggacaaactaaacaagatggtgtcagacgctcgagga
cgtgcggatgaggctaagctcagcgctcaggatgtgttactgagagccaatcagagcaaa
gcacgagtggaacagaccaacgaggatctcagagacctcattcagcaaatacgtgacttc
ctcacaaatgaaactgatccgaagcgtatagaggaagtagctgatgaggtgatgaaactg
agtttgcccgtgtcacccggtgcactgaagaacgtgaccacagagatccgccaccatgtg
gccagactgacccaggtggatgatattctgagccagacggcagagaatgcgtataacgca
gagagactcctgcaagaagcacaggctgccaatgagagagctacagcactgaaacaggcc
acagataagacgagggaaaccctggaggacaccgagcgcgctcagaccgctgccggcgaa
aaactcaaagaggtcgagagagacatgaaccaaacgaaactacaaaacgctgacgtacag
tcaaaaatcgaagcgactgagttcgaactgagcagcagcacaggaaggtttctggatctt
gagagaaagcttgaagaactccaacagaaaactccggaaacctccaggagtgcagatgaa
actcagagacaaaccgagtacatcgaagcagaaatcaaacgcacggaaggggagtttgac
tcacttgtgcagccgaagtaccaactggccagtggtctgatagatcagaaggcagcaggt
gtagttgatgcgcgtcagaaggccgagcagctacgtcaggaggcaaaagatctattaaag
gatgccacaagcaaactacagagactaagagagctggagcgatcgttcgtggaaaatcag
aacattctggcggagaaagctcaggatctggatggactggaggacaaggccagagacgtt
ctgcaggagctcagtcagaaagtcgccatctacagcacctgcgcttaa
DBGET
integrated database retrieval system
