Puntigrus tetrazona (Sumatra barb): 122342759
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Entry
122342759 CDS
T08985
Name
(RefSeq) F-box/LRR-repeat protein 14
KO
K10280
F-box and leucine-rich repeat protein 14
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122342759
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
122342759
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
LRR_Zer-1
LRR_At1g61320_AtMIF1
LRR_RPS2
F-box
LRR_At5g56370
LRR_8
LRR_14
LRR_EndoS
LRR_R13L1-DRL21
SAM_Ste50p
Antiterm
Motif
Other DBs
NCBI-GeneID:
122342759
NCBI-ProteinID:
XP_043092760
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Position
4:complement(3354369..3356141)
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AA seq
400 aa
AA seq
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METHISCLFPEILAMIFSYLDVRDQGRVAQVCTAWRDASYHKSVWRGVEAKLHLRRANPS
LFPSLQARGIRRVQILSLRRSLSYVIQGMPNIESLNLSGCYNLTDNGLGHAFVQEIPSLR
VLNLSLCKQITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLIAWGLHRLKSLNLRSCR
HVSDVGIGHLAGMTRSAAEGCLSLEYLTLQDCQKLTDLSLKHISKGLTKLKVLNLSFCGG
ISDAGMIHLSHMASLWSLNLRSCDNISDTGIMHLAMGTLRLSGLDVSFCDKIGDQSLAYI
AQGLYQLKSLSLCSCHISDDGINRMVRQMHELKTLNIGQCVRITDKGLELIADHLTQLTG
IDLYGCTKITKRGLERITQLPCLKVLNLGLWQMTESEKVR
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atggagacgcacatctcgtgtctcttcccggagattttagccatgattttcagctacttg
gacgtgagggaccaaggcagagtggcccaggtctgcacggcgtggagggacgcatcctac
cacaagtccgtgtggaggggggtggaagccaagctgcatttgaggcgagcgaatccgtcc
ctgttccccagcctccaggcgcggggcatccggcgcgttcagatcctcagcctgcggcgc
agcctcagctacgtgatccaggggatgcccaacatcgagagcttgaatctgagcggctgc
tataacttaacggataacggcctggggcacgcgttcgtgcaggagatcccttccctgagg
gtgctcaatctgagcctttgcaagcagatcacggactccagtttgggcagaatagcgcag
tatctgaaaaacttggaggtgctggagctgggcggctgcagtaacatcacgaacacgggc
ttgttgctcatcgcgtggggtttgcacagactcaaaagtctcaacctgaggagctgccgg
catgtgtcggacgtgggcatagggcacttggctggcatgacccggagcgcggcggagggc
tgcctcagcctggaatacctgaccttgcaggattgccagaagttgacggacttgtctctc
aagcacatctcgaaaggcctgaccaagctcaaagtgctcaacctgagtttctgcgggggc
atctcggacgccggcatgatccacctctctcacatggcgagcctgtggagccttaatctg
cgttcgtgcgacaacatcagcgacacgggcatcatgcacctcgccatgggcacgttgaga
ctctccggactcgacgtgtcgttttgcgacaagataggcgaccagagcctggcttacatc
gcgcagggcctgtaccagctcaagtcgctgtcgctgtgctcgtgccacatcagcgacgac
ggcatcaacaggatggtgcgccaaatgcacgagttgaagacgcttaacatcggccagtgc
gtgcggattacagacaaaggactggagctgatcgcggaccacttgacgcaactgaccggc
atcgatctgtatggatgtacgaaaatcactaagaggggactggagaggatcacgcagctc
ccctgccttaaagttttgaacctgggcctttggcagatgactgaaagtgagaaagtgagg
tga
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