Puntigrus tetrazona (Sumatra barb): 122342920
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Entry
122342920 CDS
T08985
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122342920 (optn)
04137 Mitophagy - animal
122342920 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122342920 (optn)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
122342920 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
122342920 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
122342920 (optn)
Xenophagy
Cargo receptors
122342920 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
FPP
Pox_A_type_inc
TMF_DNA_bd
PUMA_CC
zf-C2H2
EDR4-like_1st
Scaffolding_pro
Motif
Other DBs
NCBI-GeneID:
122342920
NCBI-ProteinID:
XP_043093058
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Position
4:3006873..3012104
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AA seq
523 aa
AA seq
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MASGSSMMNGDINHPRGSGPGNLGSLEETLQQMNTLIKENRELKEALKQTNLSMKERFEG
LSTWKEKQKEERDFLEQRLEEAKTRLNVMDLENEELKKRVVELEKSGAECLHTELETLRG
QIARLQAEKNDLVALNSELQLKMGQGSPRDSFIEIRIAEDELKVTRDLPDKSKDACAFSM
LKAESEEQTVRQLLRSLRAETDEKERLQLALQEARGRIAELESRLEHADTSVQTSLPCTT
EINASAEVKNLEDQLLKLCNELKQAQVKLDEAENMKRNLQDRCKDLEQDLGTVKTQLGDK
QKVQAENDTLRVQMESLQAAVKLEQKKTQDEKNNLNQLKDAYTKLFEDYNELQEENKKRE
GFVSREDYGDLQTRFDTAEKALADKQKKIDEMKMEIFQKEKELETISVFQAQAEIYSSDF
YAERAAREKIHEEKERLATQLEYVKKQNTQLQEEMESLGRHSMSEMQRRHVSRGANPQGP
ASPHHPQGGDWQQQNIPDHACPKCGEVLPDLDSLQIHIMDCII
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggttcatcgatgatgaacggggacatcaatcacccacgcggctccggcccg
gggaatctgggcagtttagaagagacccttcagcagatgaacaccctgatcaaagagaac
agagaactgaaggaggccctgaaacaaaccaacttgtccatgaaggagcgatttgagggt
ctgtcgacatggaaggagaagcaaaaggaggagagggacttccttgagcaacgattagag
gaggccaaaaccagactgaacgttatggatttagagaacgaggagctgaagaaacgagtg
gtagagctggaaaaaagtggagctgagtgtttacataccgaactggagacgctgagggga
cagattgctcgtcttcaggccgagaagaatgatctggtagcattaaactctgaactccag
ctcaaaatgggtcaaggttcacctagagattccttcattgagattagaatagctgaagac
gagttaaaagtgaccagagatttgcccgacaagtcaaaggacgcttgtgctttcagcatg
ctaaaggctgagtcggaggaacagacggtgaggcagctgcttcgctccctcagagcagag
acggatgagaaggagagactgcagctagcgctccaggaggcacgtgggagaattgccgag
ttggagagcagactggaacacgccgacaccagtgtacagacgtctctcccctgtacaact
gaaattaatgcaagtgctgaggtgaagaatctggaggatcagttgctgaagctctgtaat
gaattgaaacaggctcaggtcaaactggatgaagctgagaacatgaaaagaaacctgcag
gataggtgtaaggatctggagcaggatctaggtactgtgaaaactcagctcggagacaaa
cagaaggttcaggctgaaaatgacactctgagggttcagatggaaagccttcaggctgct
gttaaactggaacagaagaaaactcaggatgagaagaacaacctgaaccagctgaaagat
gcctataccaagctgtttgaagactacaatgagctccaagaggaaaataagaagagagag
ggttttgtatcacgggaagactacggtgacctccaaaccaggttcgatacggctgaaaaa
gcactggctgacaaacagaagaagatcgacgagatgaagatggaaatcttccagaaggaa
aaggaactagaaaccatctctgttttccaggctcaggcagagatatattcctccgatttc
tacgcagaacgagcggctcgggagaagattcatgaagagaaagagcgtttggccactcag
ctggagtatgtgaagaaacagaacacccagctccaggaagagatggagtcacttggcaga
cattccatgagtgagatgcaaaggaggcatgtgtcacggggggccaatccacaagggcca
gcatctccacatcacccgcaaggaggagattggcagcagcagaatattccagaccacgct
tgtcccaaatgtggggaagtcctacctgacctggactccctgcagatccacatcatggat
tgcatcatctga
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integrated database retrieval system