Puntigrus tetrazona (Sumatra barb): 122343087
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Entry
122343087 CDS
T08985
Symbol
exosc2
Name
(RefSeq) exosome complex component RRP4 isoform X1
KO
K03679
exosome complex component RRP4
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122343087 (exosc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122343087 (exosc2)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
122343087 (exosc2)
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
122343087 (exosc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
KH_6
EXOSC1
ECR1_N_2
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
122343087
NCBI-ProteinID:
XP_043093341
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All DBs
Position
4:17933305..17937916
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AA seq
295 aa
AA seq
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MAAEMRLPAAYKHIPPAVSRSNRDDKHLVVPGDIITSDTGFMRGHGTYMDEDRLTASVAG
EVERVNKLICVKPLKTRYNGEVGDVVVGRITEVQQKRWKVETNSRLDSVLLLSSVNLPGG
ELRRRSAQDELAMRDYLQEGDLISAEVQSIFSDGALSLHTRSLKYGKLGQGVLVLLSPSL
VKRQKTHFHNLPCGASIILGNNGFVWLYPTPAQQDEEAGGFYTSMEAVSLSDREVISRLR
NCLLALAAHKVLLYDTSVLYCYEASLSHQIKDILKPEITEEIILETRQRLVEHEG
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggagatgaggctcccggcggcgtataaacacattccaccggccgtatctcgg
tctaaccgggatgacaaacacctggtggttcctggagatatcattacatccgacacgggc
ttcatgaggggtcatggcacatacatggatgaagacagactcacggcttcagtggctgga
gaagtggagcgagtcaacaagctgatctgtgtcaaaccgctgaagaccaggtataacggc
gaggtcggggacgtggtcgtgggcaggatcacagaggtgcagcagaagagatggaaagtg
gagacgaactcgcgtctggattcggttctgctgctgtcttcagtcaatctgcccggagga
gagctgagacggcgatcagcgcaggacgagctggccatgagagactacctccaggaaggg
gatctcatcagcgccgaggtgcagtcgatcttctcggacggcgctctgtctcttcacaca
cgcagcttgaagtacggcaagctgggacagggcgtgctggtgctgctgtctccgtccctc
gtcaagagacagaagacgcacttccacaatctgccctgcggagcctccatcatcctggga
aacaacggcttcgtgtggctttaccccacaccggctcagcaggacgaggaggccggaggc
ttctacaccagcatggaggccgtgtctctgtccgatcgggaggtgatctccaggctcagg
aactgtttgctggctctcgcggctcataaggttctgctgtacgacacaagcgtgctttac
tgctacgaagcgtctctttctcatcagattaaagacatcctgaagccagagatcacggag
gagatcattctggagacgcggcagcgtctggtggagcatgaaggatga
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integrated database retrieval system
