Puntigrus tetrazona (Sumatra barb): 122343243
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Entry
122343243 CDS
T08985
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
ptet04140
Autophagy - animal
ptet04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122343243 (hif1ab)
04137 Mitophagy - animal
122343243 (hif1ab)
04148 Efferocytosis
122343243 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122343243 (hif1ab)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122343243 (hif1ab)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Cas_Csn2
Rbsn
Motif
Other DBs
NCBI-GeneID:
122343243
NCBI-ProteinID:
XP_043093512
LinkDB
All DBs
Position
4:complement(16868461..16881395)
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AA seq
769 aa
AA seq
DB search
MDTGVVTEKKRVSSERRKEKSRDAARSRRGKESEVFYELAHQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLGSDESEKENELESQLNSFYLKALEGFLMVLSEDGDMVYLSENVSKSMG
LTQFDLTGHSIFEFSHPCDHEELREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSSTWKVLHCTGHVRVQERAEGSGDSGFKEPPLTYLVVICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGYEPDDLLNKSVYEYYHALDSDHLTKTHHNLFAKGQATT
GQYRMLAKKGGFVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDVVLSLQQTVSEPK
AEEKENEEMEDEASEVDILKLFKSESLKCPMKSPDLYEKLKEEPEALTVLAPAAGDTIIS
LDFNNSDSDIQLMKEVPLYNDVMLPSSSEKLPISLSPLTPSDSTPVLTKIETDFPFSSPD
RGPDSTNAPSTSGLGSSEPNSPMDYCFQVDSDIGSEPLDLVEKLFAIDTEAKTPFSSQTM
EDLDLEMLAPYIPMDDDFQLRIPSPLDPLPSGPHSVSAMSSLFQPLPSPASPASSSSSTA
KQEASSRAPSPLHLLQEVCNAPVSPFSGSRDVSPARSPTPQSSNQLNNRELSPKMLAIQN
AQRKRKLEEVTSLSEAIGLSALLQSVDSAIEPGKRAKVLEVKGSSVLGGNKTILILPSDV
ASRLLCSSLESSSGLPQLTRYDCEVNAPVQDRHHLLQGEDLLRALDQVN
NT seq
2310 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagttgtcactgaaaagaaaagggtgagctcggagcgcaggaaggagaag
tccagggatgcagcgcgatctcgcaggggcaaggagtccgaggtgttctacgagttagca
caccagctccccctgccacacaatgtcacctcccacctggacaaggcgtccatcatgagg
ctgaccatcagctacctgcgcatgaggaagctgctcggctctgatgaatcagagaaggag
aatgagctggagagtcagttaaacagcttttatctgaaggccctggagggttttctcatg
gtcctgtctgaagatggagacatggtttatctctctgagaatgtcagcaagagcatgggc
ctcacacagtttgatctgactggtcacagcatctttgaattttcacatccatgtgaccac
gaggagctgagagaaatgcttgtccacaggacaggatccaaaaagaccaaggaacaaaac
acagagcgcagcttcttcctgcgcatgaagtgcacgcttactagcagagggcgcactgtc
aatatcaagtcttctacatggaaggttcttcactgcaccggtcatgtgcgtgtgcaggag
cgcgccgagggctcgggagactctggctttaaagagcctcctctgacctaccttgtggtc
atctgtgagcccattcctcatccctcgaacatcgaggtgcctctggacagcaagaccttc
cttagccgtcacactctggatatgaagttttcatactgcgatgaaaggatcacagagctg
atgggatatgagccagatgatctgctgaacaagtctgtgtacgaatactatcatgccctg
gattcagatcaccttaccaagacacatcacaacttgttcgcaaagggccaggccaccaca
ggccagtaccgcatgctggctaagaaaggtggtttcgtgtgggtggagactcaagccacc
gttatctacaaccccaagaattctcagccacagtgcattgtgtgcgtcaattacgttctc
agtggcattgtggaaggggacgttgtcctgtccttgcagcagaccgtgtccgagcccaag
gctgaggagaaagagaacgaggagatggaagatgaggcctctgaggtggacatactcaaa
ctcttcaagtcagaaagcctcaagtgtcccatgaagagccctgacctgtatgagaagctg
aaggaggagcctgaggctctcactgtgttggcacctgctgcaggagacaccatcatctct
ctagacttcaacaactcagattctgatatacagctgatgaaggaggtgcccctctacaat
gatgtcatgctgccctccagcagcgagaagctgcccatcagtctgtctcctctgaccccc
agcgactccactccggttctgaccaaaatagagaccgatttccctttcagctctcctgat
cgtggtccagactccacaaacgcaccttccacatctggactgggctcctcggagcccaac
agccccatggattactgtttccaggtagactcagacatcggttctgaaccactggacctg
gttgagaaactctttgctattgatactgaggcaaagaccccttttagctcccagaccatg
gaggacctcgacctagagatgctggctccatacatccccatggatgacgacttccagctg
cgcatcccctctccactggatccgctgccgtctggccctcactccgtgtcagccatgagc
tccctgttccagcccttaccctcccccgcgtctccagcctcttcctccagcagcacagcg
aaacaggaggcgtcatctcgggcgccttcgcccctgcaccttctgcaggaggtttgcaat
gcacccgtctcacccttcagtggcagtcgggacgtttcacctgctcggtcccccacccca
cagagcagcaatcagctcaacaacagagagctgtctccaaagatgttagctatccagaac
gcccaacgtaaaaggaagctggaggaagtgacatcactttctgaggctattggattgagt
gctttgcttcagagtgtggacagtgctatagagcctggcaagagggctaaggttttagag
gttaaaggatcgagtgttcttggaggaaacaaaaccattctcatactgccctctgacgtg
gccagtcgtctgctgtgcagctctttagagagcagcagcgggctgcctcagctaacacgc
tacgactgcgaagtcaacgctcctgtgcaggaccgccatcatctgctgcagggagaggac
ctcctgcgtgctctggaccaagtcaactga
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