Puntigrus tetrazona (Sumatra barb): 122343325
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Entry
122343325 CDS
T08985
Symbol
hcfc2
Name
(RefSeq) host cell factor 2
KO
K27390
host cell factor 2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122343325 (hcfc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122343325 (hcfc2)
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122343325 (hcfc2)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
HMT complexes
MLL-HCF complex
122343325 (hcfc2)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
122343325 (hcfc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Beta-prop_TYW4
Ig_RIMBP2
Motif
Other DBs
NCBI-GeneID:
122343325
NCBI-ProteinID:
XP_043093671
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All DBs
Position
4:complement(3976307..3981828)
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AA seq
721 aa
AA seq
DB search
MINKGPIWKRVRSYAGPVPRARHGHRAVSIRELVVVFGGGNEGIATNLHVYNSVTRQWFL
PAVRGDIPPGCAAHGFVCEGTRILVFGGMVEFGQYTNSLYELQASRWLWKKLKPRPPRNA
SLPCPRIGHSFTLHANKCYLFGGMANDSEDPNGNIPRYLDDFYELELQVQSGVKGWNIPE
TKGGGPSARESHSSVMYCGKGSSGPKLYIFGGMCGHRLNDLWQLDFETMTWSLPLIRGQL
PLPRSLHTSNVIGNKLYVFGGWVPIGQAEDALAADGVKWVCTNSLSMLNLDTMTWHDLTE
EDQQGSASDEQLGEQEEGNAHCPKARAGHCAVTVGTRLYVWSGRDGYKKSHNYQVCCKDL
WYLETEKPSTPGAVVLVKSTINMLHVAWRPLPAAECYLLQLQPITSQSASTEPQSTASDA
GDRKKSLQIDSQSSAEVKEEKESSSQKSILMPKELDQEGVSVMPSNVNKAGRLNSTSQCQ
KERDIPPIPSQQSVDSVWFDVGVFKTLYCEVTHYFLPSEEGNMASTLFGRNSSGIEWELP
GPHCFKDREKRELASGVTYKFRVAGLNSRGPGNFSPVSEFKTCQPGFPGAPSAVKITKDK
DSVHITWEPPTSPSGKITEYSMYLAVRKSRGNSAERPGELAFIRIYRGTKTSCTVSESQL
SNAHIDCSARPAVVFRIAAKNEQGYGPATQIRWLQDASKLKSSVTQAVSSPPAAEPDTTC
R
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgattaataagggtcccatatggaaacgagtgcggtcttacgccggacctgttccgagg
gcgaggcacgggcaccgggccgtgtccatccgagagctggtggttgtgtttggaggtgga
aacgagggaatagcgaccaatctgcatgtttataactcggtgaccaggcagtggttcctg
ccagcagttaggggtgatatcccacctggttgcgccgctcatggctttgtttgtgaaggc
acacggatcctggtgttcggagggatggttgaatttgggcagtataccaacagcctctat
gaactgcaggccagtcgatggctgtggaagaaactgaagccccgcccaccgaggaatgca
tcacttccatgcccacggattggccacagctttactcttcatgctaataagtgttacctt
tttggtggcatggccaatgacagtgaagacccaaatggaaacataccacggtatttagac
gacttctacgagctggagctgcaggtccagtctggggttaaaggctggaacatccctgaa
accaaaggtggaggtccgtcagccagagaatcccacagttctgtgatgtactgtggaaag
ggttcaagtggaccaaagctgtacatatttgggggcatgtgtgggcacagactgaatgat
ttgtggcaactagactttgagactatgacttggtcattacctctaatcagaggtcagctg
ccattacccaggagtctgcacacctccaatgtgattggaaacaagttatatgtgtttgga
ggctgggttcccattggacaggcagaggatgcgctcgccgccgatggagtcaagtgggtc
tgcaccaactctctttccatgctaaacctcgacacaatgacgtggcacgacttgacagaa
gaagaccagcagggatcagcttcagacgaacagctgggtgagcaggaagaaggtaacgca
cactgcccgaaagcacgagccggacactgcgcagtaaccgtcggcactcgtctgtatgtc
tggagcgggcgagacggatacaaaaagtcccataactaccaggtgtgctgcaaagatctc
tggtacctggaaacagagaagccttcgacccccggcgcagtggtccttgtgaagtccaca
attaatatgctgcatgttgcctggaggcccctacctgcagctgaatgttatttgcttcag
ctgcagccaatcacatctcagtctgcttccactgaaccacagtccacagcatcggacgcc
ggggacagaaagaaatctctacaaatagactcccagtcaagtgcagaagttaaagaagag
aaagaatcttcatcacagaaaagcattttgatgccaaaagaactagatcaagaaggtgtt
tctgtgatgccgtcaaacgtgaataaggccggtcggctgaatagtacatctcagtgccag
aaagaacgagatattcctccgataccatcccagcagtctgtggactcggtgtggtttgat
gtgggtgtatttaaaacactgtattgtgaggttacacactacttcctgccttctgaggaa
ggtaacatggcctcaactctgtttggtcgaaactcgtctggcattgagtgggagttgcca
ggtcctcattgttttaaggatcgcgagaagcgggaactggcctcaggggtcacatacaag
ttcagggtggccggactgaacagccgcggcccgggcaacttcagtccggtcagtgagttt
aaaacctgccagcccgggtttcctggagcgccgtctgctgtaaagatcacgaaggataaa
gattcggtgcacatcacctgggagcctcccacttctccgtcggggaagatcacggagtat
tccatgtatctggctgtgaggaagagtcgagggaacagcgcggagagacctggcgagctg
gcctttatacgaatctaccgtggcaccaagacctcgtgcacagtcagcgaaagccagctg
agcaacgcacacatcgactgctcggcgaggcctgctgtcgtcttccgcatcgctgccaag
aacgagcagggctacggcccggccactcagatccgctggctgcaagatgcgagtaaactg
aagtcctccgtgacgcaggccgtctccagtcctccagcagcagagcctgacaccacctgc
agatga
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