Puntigrus tetrazona (Sumatra barb): 122343332
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Entry
122343332 CDS
T08985
Symbol
samm50l
Name
(RefSeq) sorting and assembly machinery component 50 homolog B
KO
K07277
outer membrane protein insertion porin family
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122343332 (samm50l)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
ptet03029
]
122343332 (samm50l)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ptet02000
]
122343332 (samm50l)
Mitochondrial biogenesis [BR:
ptet03029
]
Mitochondrial protein import machinery
Outer membrane
TOB/SAM complex
122343332 (samm50l)
Transporters [BR:
ptet02000
]
Other transporters
Pores ion channels [TC:
1
]
122343332 (samm50l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Omp85
POTRA
FLQE3_permease
Motif
Other DBs
NCBI-GeneID:
122343332
NCBI-ProteinID:
XP_043093682
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All DBs
Position
4:3889437..3895875
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AA seq
469 aa
AA seq
DB search
MGTVHARSMDSYPMHGRDLGVNPDDLEVMEAVQETKQEVLENKDVVVQHVNIEGLGRTKE
DYLGYEISDVFTARNLVEVMRKSHEARQKLLRLGIFKEVEVVIDISEGTDALPNGLDVTF
EVTELKRLTGSYNTMVGNNEGSMVLGVKLPNVLGRGEKLTFQFSYGTKETSYGLSFFKPQ
SGFYERNFTLNLYKVTGQFPWSSLKETDRGVSTELNFPLWMTDHTLKWEGVWRELGCLAR
SASFAVREESGHTLKSALSHTMVIDTRNSAILPRRGALLRISQELAGYTGGDASFLKEDV
ELQLNKPFIWGSVLSASLWGGMIYPLGGQPTSIADRFYLGGPTSVRGFGMYSIGPQSEGD
YLGGEAYWAGGLHLYTPLPFRSNKRGLADLFRTHFFLNAGNLCNLNYGEGPHAHLQKLAE
CIRWSYGAGIILRLGNIARLELNYCFPMGVQSGDRICDGVQFGAGIRFL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atggggactgtgcacgcacggagtatggattcctaccccatgcatgggcgagacctgggc
gtcaacccagatgatttggaagtgatggaggcggtgcaagaaactaaacaagaggtttta
gaaaataaagatgttgtcgtgcagcatgtcaacattgaaggcctgggcagaactaaagag
gattacctgggctatgaaatctctgatgtcttcactgccaggaacctggttgaagtgatg
agaaaatcccacgaggccagacagaagttgctccgtctaggcatatttaaagaagtggag
gtggtgattgacatttcagaaggaacagacgcactgccaaatggactcgatgttacattt
gaggtgactgagcttaaacgacttactggcagttataataccatggttggaaacaatgaa
ggcagtatggtcttgggcgttaaacttcctaatgttttaggccgaggagagaagctcacc
tttcagttttcctatggaacgaaggagacttcatatggcctgtccttctttaaaccacag
tcaggattttatgaacgcaactttactctaaacctgtacaaagtcaccggccagttccca
tggagctctctaaaagagactgaccgaggggtttctacagagctcaatttccctctgtgg
atgacggatcacacactgaaatgggagggagtgtggcgtgaactgggatgtctggcccgc
agcgcctccttcgctgtgagagaggagagcggccacactcttaaatccgccctttctcac
accatggtaatagacaccaggaactctgccatcttgccccgaagaggtgccttactgcgg
atcagccaggagctggcgggatacaccggcggagacgccagctttctcaaagaagatgtt
gagctgcagcttaacaaaccatttatctggggatcggtgttatctgcatctttatgggga
gggatgatctatcctcttgggggtcagcctacctccattgctgacaggttctacctgggc
ggcccaaccagtgtgagaggttttggcatgtacagtataggccctcagagtgaaggtgat
tatctgggtggggaagcgtattgggccggtgggcttcacctgtatacgcccctccccttt
cgctcaaacaagcgtggcctggctgacctcttcagaacacacttcttcctcaatgctgga
aacctttgcaacctcaactacggagagggaccacacgcgcatctgcagaagcttgcggag
tgtatacgctggtcttacggcgcaggaataattctacgactgggaaacattgctaggctc
gaacttaattactgcttccccatgggtgtccagagcggagacaggatatgcgacggtgtg
cagttcggagcaggcatacgtttcctgtga
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