Puntigrus tetrazona (Sumatra barb): 122343372
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Entry
122343372 CDS
T08985
Name
(RefSeq) mRNA-decapping enzyme 1B-like
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122343372
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122343372
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122343372
mRNA degradation factors
5'-3' decay
Decapping complex
122343372
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
WH1
HVO_B0008_C
Motif
Other DBs
NCBI-GeneID:
122343372
NCBI-ProteinID:
XP_043093728
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Position
4:complement(9746940..9755926)
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AA seq
493 aa
AA seq
DB search
MTASTGGGGSCLSMSLSALKRLDPYISSITDLASQVALYTFNNTTNEWEKTDVEGTLFVY
NRLASPRHGFTILNRLSMDNLTEPITKDLDFQLQHPFLLYRNARLSIYGIWFYDKEDCQR
IAELMKNLAGLEQQLQSQMAIGSVSPRSAEQGVDIMQMLTKARDDYDKGKLCEPKEIGSG
GVIYGNPHLIKPIPLKPAQDTHIQGHTQQDTEMDTKHLSVVTLFSAQSKPDSVSPQPATA
VSRLGPARSAVARSLSYDDPSPAGGATVSNAPAQHCPAIHKLMSGSLLQPLSESPESRMC
ENGAVQNQIDPIQKLLMSPLPVAGTPGMPSLQFNQGESGVGAKASGPVPAQHLLYVPNKA
PPAGAAGNVVSPHELLQRLTLVQQEQELHPHQELLQPSLTTSSSSLSKTNSTQVSSPQRI
PATVAPTMLLSPSMFTQTKTTRAEPEPAEIRALSKTQLQATLLHLIKNDASFLDTIYEAY
VSRLATDSSSKPF
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaagcactggtggaggcgggagctgtttatctatgagtctgtcggccctaaag
agactcgacccttacatcagcagcatcacggacctggccagccaagtagcactttacacc
ttcaacaacaccactaatgaatgggaaaagacagacgtggagggaactctgtttgtgtat
aacaggcttgcctcccccaggcacggcttcaccatcctgaatcgtttgagcatggacaac
ctgaccgaacccatcactaaagacttagatttccagctgcaacatccatttctcctgtac
aggaacgctcgcttgtccatctatggcatctggttctacgataaagaagactgtcagcgc
atagcggagctcatgaagaatttggcaggtctggaacagcagttacaatctcaaatggcg
atcggctcggtctctccgcgatctgcagagcagggtgtggatataatgcagatgctcact
aaagcacgagatgactatgataagggaaaactctgcgagccgaaagaaattggcagtggt
ggcgtcatctacggaaacccccatctgatcaaacccattcccctcaaaccagcacaggac
acgcacattcagggacacacgcagcaggatacggagatggacacgaagcacctctcggtt
gtcactttgttcagtgctcagtcaaaaccggactctgtctcgccgcagcccgccacagct
gtcagcaggctgggtcccgcgcggtctgcggtggcccgctcgctgtcatacgatgaccct
tctccagcaggtggcgccacggtgtccaacgcccccgcgcagcactgtccagccatacac
aaactcatgtccggttcactgcttcagcccctgtctgaatctccagagagccgcatgtgt
gaaaacggggccgtccagaaccagattgacccgatacaaaaactgctaatgagccctctt
cctgtagcggggactccagggatgccttccttacagtttaatcagggagaaagcggggtg
ggggctaaagcctcggggccggtcccagctcagcatttgctctatgtcccgaataaagcg
ccccctgctggagcggcagggaacgtggtgtcgccacatgagcttctgcagaggctcaca
ttggtgcagcaggagcaagagctccaccctcatcaggagcttctccagcccagtctgacc
accagcagctccagcctgagcaaaactaactccacacaggtgagctcacctcagcgtatc
ccagcaactgtagcccccaccatgctcctgtcacccagcatgttcacccagactaaaacc
acaagagcagaaccagaaccagctgaaatcagagcacttagcaagactcagctgcaggcc
acgctgctgcacctcatcaagaatgatgcctctttcctggacacaatctatgaagcatat
gtctcccgtctcgcaacagactccagctcaaaacctttctga
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