Puntigrus tetrazona (Sumatra barb): 122343382
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Entry
122343382 CDS
T08985
Symbol
rims1b
Name
(RefSeq) regulating synaptic membrane exocytosis protein 1 isoform X1
KO
K15291
regulating synaptic membrane exocytosis protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122343382 (rims1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122343382 (rims1b)
Membrane trafficking [BR:
ptet04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
122343382 (rims1b)
Small GTPases and associated proteins
Rab associated proteins
122343382 (rims1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RIM2a_ZnF
FYVE_2
PDZ
IBR
Motif
Other DBs
NCBI-GeneID:
122343382
NCBI-ProteinID:
XP_043093749
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All DBs
Position
1:complement(16622817..16679210)
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AA seq
1463 aa
AA seq
DB search
MSASVGPQSGPRPPTVPAPMPDMPDLSHLTEEERKIIMAVMVRQREEEEKEEAMLKTLHQ
QFESYKEQVRKIGAETKRQQAVHKDDAPTCGICRKTKFADGCGHLCSYCQTKFCARCGRR
VSLRSNNEDKVCFIGKDRVMWVCNLCRKQQEILTKSGEWFSSGPGGRPLSVGAPLSVPEL
EKDRKLRSRSQAPVTNDTLPPSTGAGDATRGADTMPASRSRSEPPRDKKRPVSLHEQNGK
VIGRGERRRGPGRLSSQASEDRAPGEKRDSRRLEKGHSQEYPENEPTHPERRRRQEEEER
ERQRREEEYQTRYRSDPNLARYPVKPQKEEQEMRMHAKVSKMRQERHHSDLAINEVGLMQ
DGGEAAGNRMSRQRVANNEDRKTLLENHRAYSVDRTVGGGIGGQGSLAKQGHGGPQMGPT
GPLDLRDGQDWGPKGHLEPGSAAFLHRAKREKAAEIMRKDSSLSSDQSESLRPPPPRAYR
PKRGLNKRQMSISSSEEEGGSTPEYTSCEDVEIESVSEKGDWDCHPLDPAVWHHPVSWQP
SKEGDHLIGRITLSKRSTMPREAGSLLGLKVVGGKMTESGRLGAFITKVKKGSLADIVGH
LRAGDEVLQWNGKALPGATKKEVYNIILESQSAPQVEIVVSRPIGDTPRLPGTSHPPLES
TGSSSIDESQKVDRPSISVMSPTSPGMLRDLPLVLPGQLSVKLWYDKVGHQLIVNVLQAR
ELPPRPDGRPRNPYVKMYFLPDRSDKSKRRTKTVKKIAEPKWNQTFLYSHVHRRDFRERM
LEITVWDQPRVQEEESEFLGEILIELETALLDDQAHWYKLQTHDVSSLPLPQPSPCLPRR
HVHGDSPSKKLQRSHRIIETDYDDGITVVSSAAERNSRDRERSSTLTVPERQAAIQHRSR
SVSPHREDQCRARSRPAHVPMQRSLDEIHKNRHHSYSPSHYHDSHQEHRSGDSDYEYSED
SEVLEMHRSIRGGSAECLHTNSDLQPSLDRVRSASTTCLRPESNFHSPERERELQYGGHY
SPAGTTSLGRRGRQLPQLPAKSSSIEQDHVNSKPEEKPNSALAVEERARQLQMRVHSYRP
GSSASSGHDPEAELKNRRDMYKDQRRSCDNMSARSSDSDMSDASAISRASSASRLSATSY
MSIQSERPHGRISRQVRASSGRSMLKSTSVSGDINTSERTDGSQSDTALGTVGTGAKKRR
SSLNARFVAIVGNRSRSTSQISQTEASNKKSKGSQGTIQRSQETGMAVELQRNMSRQPSR
ESNNGSMNSYNSEGSPIFPAVRVETQFSDFLDGLGPAQLVGRQTLATPAIGDIQIGMVNK
KGQLEVEVIRARGLIQKPGSKSLPAPYVKVYLLHNGAYVAKKKTKIARKTLDPLYQQTLQ
FEESPQGKVLQVIVWGDYGRMDHKSFMGVAQILLEELDLSSNVIGWYKLFPPSSLVDPTL
ASLTRRASQTSLDSSPAPAGVRS
NT seq
4392 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcctcggtagggccccaaagcggccctcgcccacccaccgtgccggctcccatg
cctgacatgccagacttaagtcacctcacggaggaggaaaggaaaatcatcatggcagtg
atggttcggcaaagggaggaagaggagaaggaagaagccatgctaaagacactgcaccag
cagtttgagagttataaggagcaggtgaggaagattggggcagaaaccaaacgacagcag
gctgtccataaagatgatgcacctacctgtggcatctgccgtaagaccaagtttgcagat
ggctgtgggcatctgtgttcctactgccagaccaagttctgcgcccgctgtgggagaaga
gtgtcgctgcgctcaaataacgaggataaagtgtgtttcatagggaaagacagggtgatg
tgggtatgtaacctgtgcaggaaacagcaggaaatcctaactaagtcaggagaatggttt
tcatcagggcctggggggaggcctcttagtgtgggcgctcccctcagtgtccctgagttg
gagaaggacaggaagttgcggtccagatcacaggcaccggtcacaaacgacaccctgcca
cccagcactggagccggtgacgccaccaggggagcagatacgatgcctgcttcacgctcc
cgcagtgaaccaccacgagacaagaagagacccgtgtccctgcacgagcagaatggaaaa
gtgataggacgtggagagagaaggagaggcccaggccggttgtcatcacaggcctccgaa
gaccgagctccaggtgagaagcgtgacagcagacgattggagaaaggccattcgcaggaa
tacccagaaaatgagcccacccatcccgaacggcgaaggagacaagaagaggaagagcga
gaacgtcaaagacgagaggaagagtaccagactcggtaccgcagtgacccgaacctcgcc
cgctaccctgtcaaaccgcagaaggaggaacaggaaatgcgaatgcatgccaaagtgtcc
aaaatgcgccaggagcgccatcacagcgacctggccatcaacgaagtgggattaatgcaa
gatgggggtgaggcggctggaaatcgcatgagcaggcaacgagtggccaacaacgaagac
cgcaagacccttttagaaaaccatcgagcttattctgtggacaggaccgtggggggtggc
attgggggacaaggatccctcgccaaacagggccacggtggtcctcaaatgggtcctacc
gggcccctagacctcagggacggacaggactggggcccaaaggggcatctggaacctggg
tccgcagcttttctgcacagggctaagcgggaaaaggctgcagaaatcatgcgtaaagat
tcttctcttagctcggaccaatcagagtcgttacggccacctccgcctagagcctacaga
cccaaacgaggcctcaacaaaaggcagatgtccatcagtagctcggaagaagagggcggc
tccacacctgaatacaccagctgtgaggacgtggagatcgaaagtgttagtgaaaaaggt
gactgggactgtcatcctctggacccagctgtgtggcaccatccagtgagctggcagcca
tccaaagagggagatcatttgattggccgcatcactctaagtaagcgctccaccatgcca
cgagaagctggttccctgctgggtctgaaggtggttggtgggaaaatgacagagtcaggg
agactgggggccttcatcaccaaagtaaagaaaggaagtttggctgacattgtaggccat
ttacgagcaggcgatgaggtgttacagtggaatggaaaggcgttgcctggcgcaactaaa
aaggaagtgtacaatattattctagagtcccagtcagcacctcaagtggaaatagttgtt
tccagaccgattggagatacaccgagacttccaggaacatcacatcctcctctagaatca
actggttcaagttctatagatgaatcccaaaaggtggaccgtccatccatctctgtaatg
tcaccgactagccctgggatgctgagagacctccctctggtcctgccaggccagttgtcg
gtgaaattatggtatgataaagtgggccatcagctcattgtcaatgtcctacaagcacga
gaactgccccctcgaccagacggacgacccagaaatccctacgtcaaaatgtattttctt
cctgatagaagcgacaagagcaagagacggacgaaaacggtgaagaagattgcagagcca
aagtggaaccagacgttcctgtattctcacgttcaccgcagagacttcagagagcgcatg
ctggagatcactgtttgggaccagcccagagtccaggaggaagaaagtgaatttctggga
gagattctgatcgagctggaaacagctctgttggatgaccaggcacactggtacaagttg
cagacccacgatgtgtcgtccctgccgttgccccagccgtccccctgcctccctcgcaga
catgttcatggagacagtcctagtaaaaaactgcaaagatctcatcgcatcattgaaaca
gattatgatgatggtataacggtagtttcctcagcagcagagaggaactccagagaccgg
gagaggtcaagcacactgaccgtacctgagagacaggcggccatacagcatcgctcgcgg
tcagtatccccgcacagagaagaccaatgcagagcccgctctcgacctgcacacgtccct
atgcagaggagtctggatgagatccacaaaaaccgccatcattcctattctccctctcac
taccacgactcccaccaggaacatcgctccggagattctgactatgaatattcagaggac
agcgaggtcctggagatgcacagatcaatccgaggtgggagtgctgagtgcctgcataca
aacagtgatcttcagccttcattagacagagtaagaagtgccagcacgacttgtttgaga
ccagagtcaaacttccactcgcccgaaagagaaagagaacttcagtacggtggacattac
tccccggcagggaccacgtcgttaggacgcaggggcagacagctgccacagctccctgca
aagagcagcagtatagagcaagaccatgtcaacagtaaacctgaggagaaacctaactca
gccctggcggtggaagagcgggctcgtcagttgcaaatgagagtacattcctatcggcca
ggctcttctgccagctctggtcacgacccagaggcagagctcaaaaacaggagagatatg
tacaaggaccagaggaggagttgtgataacatgtctgcgaggtcatcagacagcgacatg
agcgatgcatcggctatctcccgtgccagcagtgcctcacggctcagcgccaccagctac
atgtccattcagtctgagagaccacatgggagaatcagtcgacaggtcagagcctcctct
ggtcgaagcatgctgaagagcacaagcgtgagcggtgacatcaacacgtcagagcgaaca
gacggcagccagtctgacaccgccttgggaacggttggaactggagcgaaaaaacgccgc
tccagcctcaacgctcgatttgtggccatcgtgggaaatcgcagccgaagcacctcacag
atcagtcaaacagaggcatccaataagaagtcgaagggcagtcaagggacgatccagcgc
agccaggagacgggaatggctgtggagttgcagaggaatatgagtcgtcaacccagccgt
gaatctaacaacggaagcatgaacagctacaactctgagggcagtccaatctttccagca
gttcgagtcgagactcagttcagtgacttcctggatggactgggccctgctcaactagtc
ggtcgacagacacttgccacaccggcgattggtgacattcagattggcatggtgaataag
aaaggccagctggaggtggaggtgataagagcacgaggtctcatccaaaaaccagggtcc
aaatcactccccgctccatatgtcaaagtctatcttctacacaatggggcgtatgtagct
aagaagaagacaaaaattgcacgcaagacactcgacccgctgtaccagcaaacgctgcag
tttgaagaaagtccacagggtaaagtgttacaagtaattgtctggggagattacggacga
atggaccacaaatccttcatgggagttgcacaaatcctgctagaggagctggacctctcc
agcaacgtgattggctggtacaaacttttcccgccttcttccctagtcgacccaactctt
gcctctctgactcgacgtgcttctcagacgtccctggacagctcgccggcacctgcgggg
gttcgatcgtag
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