Puntigrus tetrazona (Sumatra barb): 122343424
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Entry
122343424 CDS
T08985
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122343424 (pus7l)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
122343424 (pus7l)
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
122343424 (pus7l)
Prokaryotic type
122343424 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
122343424
NCBI-ProteinID:
XP_043093816
LinkDB
All DBs
Position
4:complement(7085314..7091042)
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AA seq
675 aa
AA seq
DB search
MERDTLSRFMSDHEGFHGTIKNSPQDFVVIERDINGQLVNGPCVPEEHTKRPPQPSQAAK
RDDALKQSEPDDTDVLTEDCFDLNVILRPAVNKELERFTNKIRVRAGEKEKVELSLGTYP
DKHQRAVVHRAVRYNFPFLQTLTDRSEIRVREDPDFNELASLASEAEAEEFFRFIDAKAP
GSAFTFLPDDSKEHRTSVHHFVSRRFGKLVETKSFTDQQRTSITVRLRERSRQPKKRAIA
ECQEEATLYTAFTLRKENLETLEAISYMAAVLGVLPSDFTYAGIKDKRAITYQAMVVKKI
SPERLQDQVLDFKRRGMQISHVRPVSEPLKLGRLQGNHFDLVIRDLKPHGKSQLTELQHL
VKEAVENVKNRGFVNYYGPQRFGSGSCVQADQVGLALLKEKMEASVKLFFTPEDGDDLQN
KAKRHFLLTVPVHPRTTNSLRASLSSGNAKESLALMPAYKARERLMLRALHRYGSGQEGC
IRGWLSLPHSMRVFYLHSYCSRVWNEAAKYRLQTLGFKPVQGDLVLWSGSEKRLKDTTEE
LNTPQVRNSEEQVHVVTSVEEKDEVFSLDQVILPMPGNSVKYPENVLGQWYQERLAEDGL
GSSRFRVTSLKLNIPGCYRPLLAKPQNMTYSLQTSEELQGQSDQTRVSSLSVNFNLDASC
YATVCLGEIMKCNLS
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagagggacactctctcccgcttcatgtcagaccatgaaggtttccatggcactata
aaaaactcaccccaagactttgtggttattgagagagacatcaatggacaacttgttaac
ggtccttgtgttccagaagaacacacgaagagaccacctcaaccaagtcaggctgctaaa
agggacgatgcattaaaacaatctgaaccagatgacactgacgttttgactgaggattgc
tttgatctgaatgtaatcctgcgtccagctgtgaacaaagagctggagcgtttcactaac
aaaataagggtaagagctggcgagaaagaaaaggtggaactgtcgctgggtacttatccc
gataaacaccagagagcagttgtgcacagagcggtacgatacaacttcccctttctccag
actctgaccgaccggtcggagattcgggtcagagaggacccggacttcaatgagcttgct
agtttagcctccgaagcagaagctgaggagttcttccggttcatcgatgccaaagcgcct
ggttctgcgttcaccttcctgcccgatgacagcaaggagcatcggacttcggttcaccat
ttcgtcagcaggcggtttgggaagcttgtggaaaccaagagcttcaccgaccagcagagg
acttccattacagtgagactaagggagagaagcagacaacccaagaagagagcgatagca
gaatgtcaagaggaggcgacgttatacacggctttcacactgaggaaggagaacctggag
actctggaggccatcagctacatggctgctgtgcttggagtgcttccgtccgatttcacc
tatgcaggaattaaagacaagcgagccatcacctaccaggccatggtggtgaagaagatc
tctccagagcggttgcaggaccaagtcttagattttaagaggaggggaatgcagatctct
catgtgcgtcctgtttctgagccccttaagctcggcagactccagggaaatcactttgat
cttgtcatcagagacctgaagcctcatgggaaaagtcaacttacagagctgcaacatctt
gtaaaagaggcagtggaaaatgtgaagaacagaggctttgtaaattattatggtccccaa
cggtttggaagcggatcatgtgtccaagcagaccaagtagggcttgcgctattaaaggag
aaaatggaggcttccgttaagctgttcttcactccagaggatggtgatgatctccagaac
aaggcaaaacgtcactttcttctcactgttcctgtgcatccgagaacgactaacagcctc
cgtgcatctctctcttcagggaatgccaaggagagcctggccctcatgccagcttataaa
gccagagagcgcctcatgctccgagctcttcaccgatacggcagcggtcaggagggttgc
atacgtggctggctcagtttaccccacagcatgagggtcttctacctccactcctactgt
agcagggtgtggaacgaagctgccaaataccggctccagacactgggctttaagcctgtc
cagggagatctagttttatggtccggatctgaaaagagactcaaagacaccacagaggaa
ctgaacacgccacaggttaggaactcggaggaacaggtccatgttgtgacctctgtggaa
gaaaaggatgaagttttttcattagaccaggtaattcttccgatgccaggaaatagcgtc
aagtacccagaaaacgtactgggccagtggtatcaagagcgtttggctgaggatggcttg
gggtcatctcgtttcagagtgacttcccttaaactcaacatcccgggatgttatcgcccg
ctgctcgcaaagccacagaacatgacgtacagcctgcagacctctgaggagcttcaggga
cagtcagatcagacccgtgtgtccagtctatcggtaaactttaacctggatgcatcctgc
tatgctactgtgtgtcttggggagattatgaagtgtaatctgtcatag
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