Puntigrus tetrazona (Sumatra barb): 122343467
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Entry
122343467 CDS
T08985
Symbol
caprin2
Name
(RefSeq) caprin-2 isoform X1
KO
K18744
caprin-2
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122343467 (caprin2)
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
122343467 (caprin2)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Caprin-1_dimer
C1q
Caprin-1_C
DUF1179
Motif
Other DBs
NCBI-GeneID:
122343467
NCBI-ProteinID:
XP_043093879
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Position
4:complement(8405825..8414329)
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AA seq
952 aa
AA seq
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MGFLRSEDIKRETEIMVQLSPSRTLETLTPSGLTVEKEDGQGSPKSESPRVLTALQVALS
PSTTTYYGYEKYIENGLICLKHKIRNIEKKKLKLESYSERLKKGDKLNQDQLEAVGKYEE
VVHNLKFAKELQKTIGALTQDLLKAQRKVARQEKVMRIEEERKRLSLMLQVQYVLHSLQR
EDVRRNFCNMRQNSCYLSTQDMESLLDLASLLGCKRDHRMSLEDQMEQAAIVYWELLEGK
EGPVAGSTYKHVKEKLLRLVDCGFFDHVPLPKVDSQKTTETLKADPPSRPCGLSTLVKLS
SKEVPSKEFLNRRCLPETAVTERRQDENASPRGWKEEFMAMKEREPPDSWEMDFSDPPAS
SRSPIQKPWKEAAGLIPKSADIVKRPTTDPKEKRQRKSKGEQDSKPMPVAVEVFSSPSPL
PKDPAQRKQQLESLMDQISGSFSFMQDSLLDGEMSPVNGQTKRCRPSPGSSTPLAQRELT
KSPSDILSQSQRSTPLRILLSGEVKGCMSNGDRSINGSDLDLHHEEKPHKQGDGFTSPPL
YRRGSSISVPLENQSAVQTGKQTLCNGVSTTVSAPTFSTPPSHRSISAENTFHNIHSVFN
VASLPISESSGMKSDESGFSESMHLSYTSPKTLSYSTASTQTPPELNLPEDDLQIEGPYQ
LECPVSAGGHVFSGSQSRLGQSCYPRGTARGMMRAGRGLGHSYRSPGGYRGGYDAYRVNV
RSPGGSFMSQTHTTHRDPAAALYMSRENGYQSFKRGGGTATQRGSAGWSDSSQVSSPDRE
GSYPLDSGISDTLSIPPMEVPITPQGPHTLMPVHVYPLTQLRVAFSAARTANFAPGTLDQ
PIAFDLLHTNLGEMFDTATGRFTCPAAGAYVFIFHILKLAISVPLYINLMRNEEVMVSAY
ANDGAPDHETASNHAVLQLFQGDQVWLRLHRGAIYGSSWKYSTFSGFLLYQD
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atggggttcctccgctcggaggacataaaaagagagaccgagatcatggttcagctgtca
ccatctcggaccctagagacgttgactccgtcagggttgaccgtggagaaggaggatggc
cagggcagccctaaatccgagtcccctcgggtgctcaccgccctccaggtcgccctcagc
cccagcaccaccacctactacggctatgagaaatacatcgagaacggcctcatctgcctc
aagcacaagatccgtaacattgagaaaaagaagctgaaactggaaagctacagcgagcgg
ctgaagaagggggacaaactcaatcaagaccaactggaagctgtggggaagtacgaggag
gtggtccacaatctcaagtttgccaaagagctccagaagacgatcggggcgctcacgcaa
gacttgctgaaggctcagcgcaaagttgctcgacaagagaaggtgatgaggatcgaagaa
gagaggaaacgtctgagcttgatgctccaggtgcagtacgtcctccacagcctgcagaga
gaggacgtccggaggaacttctgcaacatgagacagaactcctgttacctgtccacgcag
gacatggagagcttgctggacctggcgtcgttgctgggatgcaaaagagaccataggatg
agtttagaggatcagatggaacaggctgctattgtttactgggagcttctggaagggaaa
gaaggaccagttgctggctctacatataagcacgtgaaggagaagctgcttcgtctcgta
gactgtggcttttttgatcacgtaccacttcctaaagttgacagtcaaaagacgactgag
accctaaaggcggaccctccatcaagaccttgtggcctctccacactggtgaagctgagc
tcaaaagaagtgccttccaaagagtttcttaacagacgatgcctaccagaaacggccgtg
acggagcgcagacaggatgagaacgcgtcgccccgtggctggaaggaggagttcatggcc
atgaaggaaagggagccaccggactcgtgggaaatggacttttctgatcctcctgcgtcc
tcgaggtcacccatacagaagccatggaaagaggcggcggggttaattcccaagtctgcc
gacatcgtaaagagacccaccactgaccccaaggagaaacgtcaaaggaagagcaaaggg
gagcaggactctaaaccaatgcctgttgcagtggaagtcttcagctctccgtctccatta
ccaaaagaccctgctcagcgcaaacagcagctggagtctctgatggaccagatttcagga
tccttcagcttcatgcaggactcccttctggatggagaaatgtcccccgtaaatggtcaa
acaaagagatgccgtccatctccaggctcctctactcctcttgcacagagggagttaaca
aaaagcccatcagatattctgtctcaatcccagcggagcactccgctacggatcctgctg
tctggagaggttaaaggttgcatgtcaaatggagaccgctctataaacggctctgacctt
gatctacatcatgaagagaaaccacataagcaaggcgacggcttcacctctcctccactg
taccgcagaggatcttccatctcggtcccattagaaaaccagagcgctgtacagacagga
aagcagacgttatgcaatggagtatcaaccacggtgtctgccccgacattttccactccg
cccagccacagatctatcagtgcagaaaacaccttccacaacattcactcagtgtttaat
gtggcgtctttgcccatcagtgagagctcagggatgaagtcggatgagagtgggttctcg
gagtccatgcatctgagttacacgtcacctaagaccctgagttactccactgccagcacc
cagacaccacctgaactcaacctacctgaagatgacctgcagatcgaaggcccgtaccag
ctggagtgtcctgtcagtgcaggtggtcacgtgttttctggctcccagtctcgtctgggt
cagtcctgctacccccgtggtacagcgagaggtatgatgcgtgcaggcaggggtttgggt
cactcatacagatcacctggtggctacagaggtggttatgacgcctacagagtgaatgtg
cgttctccaggagggagcttcatgtcccagacccacaccacacacagagaccctgcagct
gccctttatatgtccagggagaacgggtatcagagcttcaaacgaggtggaggcacagcg
actcaaaggggcagtgccggttggagtgactcttctcaggtgagcagcccggaccgggag
ggttcgtatccgctcgactcaggaatcagtgacacgctctccatcccgccaatggaagtg
cccatcacgccccagggcccacacaccctgatgcccgtacacgtgtacccgctcacccag
ctccgcgtggccttctctgccgcccgcacggcaaacttcgcccctggcactctggaccaa
ccgatcgcttttgacctgctgcacaccaacctcggcgagatgttcgacacggccaccgga
cgcttcacctgtcccgccgccggcgcttacgtcttcatcttccacatcctgaagctggcc
atcagcgtaccgctgtacatcaacctcatgcgcaacgaagaggtgatggtgtccgcttac
gccaacgatggcgctccggaccacgagacagccagcaatcacgccgtcctccagctgttc
cagggcgaccaagtgtggctaaggctgcaccggggcgccatctatggcagcagctggaag
tacagcactttctctggtttcctgctgtaccaggactga
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