Puntigrus tetrazona (Sumatra barb): 122343485
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Entry
122343485 CDS
T08985
Symbol
prdm4
Name
(RefSeq) PR domain zinc finger protein 4
KO
K12463
PR domain zinc finger protein 4 [EC:2.1.1.-]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122343485 (prdm4)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122343485 (prdm4)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf_PR_Knuckle
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-H2C2_5
zinc_ribbon_9
zf-C2H2_6
CENP-B_dimeris
zf-C2HC_2
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
122343485
NCBI-ProteinID:
XP_043093906
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Position
4:complement(7469919..7477407)
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AA seq
832 aa
AA seq
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MNDMNLSPVGMDQLSVPPVSASHLGLPTSPTHNPITTSGMPVAIPSLGPSLGPLPSALSL
MLPMGPLGDRGVMCGLPERNYTLPPPPYPHIESSYFRHILPGILSYLADRPPPQYIHPSS
LNMDGTLSVSNNNPSGLDPYSGPGGPLEQGLVTLDTRQVGGQADLHQGGSHEVQLDATGL
TMESRVSSPMSPDGMEEDLATMEGVVVAETQQQMGTRPQPHEGLAGVDSSGGVMPLHGAG
LELPVVMEQEHMGGRVGSNTTGAGGPGTLSEALHSTGELNSGVVSVVLTGAMPPQAQLES
VSLHGPTGMGLEPVNVSPITAEVSLGPDNSLVLVNSTLQLEDSTSNKENMATAFNIWCTL
CERSYPSDCPEHGPVTFIPDTPIQSRARLSLPRPLCLRISVADEPIGVFARETIPSRTCF
GPMVGQHCSSVELTDWSDKDTPQIWKMFHNDIQEFCIVTTDEHECNWMMFVRKARTTEEQ
NLVAYIDNGKLYFCTSREILPDQELLFYYSRDYTRQLGVPRVPEGQICHCGKECGSFTEF
KSHLSSHAQSHSPSQDHPAHAAHNQSRSQEKVTNESSQSASSPQWQCHSDVNEHSSSSGG
SNGHGRERKFKCSMCTRAFTTSTKLNVHFMGHMGMRPHKCSYCSKAFSDPSNLRKHLRIH
TGQKNFRCTVCGKSFTQKAHVESHMVIHTGAKNIKCDHCDKMFVRKQDLKQHMYSHSLDR
QITCPKCNKQFLKTDHLKKHLNSHDGKRDFICEKCNKGFLTKYHLTRHLKICKGPKIGRG
PAQGEEGEEEEDEEEEDEEDEREAEGQINPANEEDCGIGMRGYTSEKKYVTG
NT seq
2499 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacatgaacctcagcccagttggcatggaccagctcagcgtgccgcctgtgagt
gcaagtcaccttggcctccccacatccccaacgcacaatcctatcaccacttcaggcatg
ccagtagctatacccagcttgggtccgtcacttgggcctcttccttctgcactgtccctg
atgttacccatgggtcctttaggggacagaggtgttatgtgtggccttccggagagaaat
tatacattaccacctcctccatacccacacatagagagcagctacttcagacatatcctt
ccaggtattctgtcatatctggcagatcgtccccctccccaatacattcatcccagcagc
cttaacatggatgggactctttcagtgtccaacaacaacccctctggtttagacccatac
agcggccccggcggccctctagaacaaggcctggtaaccctagacacaagacaggtcgga
ggccaggctgatctccaccaaggaggctctcacgaggttcagctagatgccacaggacta
accatggagtctcgtgtaagtagtcctatgtctcccgatggaatggaagaggacctggct
accatggaaggtgtcgtggtggcggagacgcagcagcagatgggcaccaggcctcagcct
catgagggtttggccggtgtggactcctcaggaggtgtgatgcccctccacggagcgggg
ctggagcttccggtggtgatggagcaggagcacatgggcggcagagtagggtccaacact
acaggagcgggcggaccagggacgctgagtgaagccttgcactccaccggagagctgaac
tccggggtggttagtgtggtgctcacgggggccatgccacctcaagctcaactagaatcg
gtatctctgcatggacctacaggaatgggactcgagcctgttaatgtgtcacccatcacc
gcagaagtgtctcttgggccggacaacagtctggtgctagtgaactctaccttacagcta
gaagactcaacatctaataaggaaaacatggccactgccttcaacatatggtgcacttta
tgtgagcggtcatatccgtcggactgccctgagcatggacctgtcactttcatcccagac
acgcccattcagagcagagcccgcctctctctgccccgccccctctgccttcgcatttct
gtagctgatgagcccattggtgtttttgctagagagaccataccctccaggacctgcttt
gggccgatggtcggacagcactgtagcagtgtagagcttacagactggtctgataaggat
actcctcaaatatggaagatgttccataacgacatccaagagttctgtatcgtgacgaca
gatgagcatgaatgcaactggatgatgttcgtacggaaagcaagaaccacagaggaacag
aatctcgtggcatatattgacaacgggaagctgtacttctgcacgtccagagagattctg
ccggatcaggagctgttgttttactacagcagggactacaccagacagctaggtgttccc
agagtgccggagggacagatttgtcattgcggcaaagaatgtggctctttcacagagttc
aagtcgcacctgagcagccacgcccaaagtcacagcccctcccaggaccaccctgctcac
gctgcacacaaccagtcccggtcccaggagaaggtgaccaacgagtcgtcccagtccgcc
tcctcgccgcagtggcagtgccactcggatgtgaacgagcactccagcagcagcggcggc
agtaacgggcacggtcgcgagaggaagttcaaatgcagcatgtgcactcgagcgttcact
acgtcgaccaagctgaacgtgcatttcatggggcacatgggcatgagaccacacaagtgt
agctactgcagcaaagcctttagcgatcccagcaatctcaggaaacacctgagaatccac
acaggccagaagaactttaggtgcacagtatgtgggaaatcttttactcagaaagcacat
gtggaatctcacatggttatacacactggtgccaagaacattaaatgtgatcattgtgac
aagatgtttgtgaggaagcaagatctcaaacagcacatgtattcacattcactagaccgt
cagataacttgtccaaagtgtaacaaacagttcttgaagaccgaccatctcaaaaaacac
ctgaactctcacgacgggaagcgggacttcatctgtgaaaagtgcaacaagggctttctc
actaaataccacctcacgcgccacctcaaaatctgcaaaggtcctaagatcggtcgaggg
ccagcgcagggtgaggaaggggaggaggaggaagacgaggaggaagaggatgaggaggac
gagagagaagctgagggacaaatcaatccagccaacgaggaggactgtggaatagggatg
agaggatacacttcagaaaaaaaatacgtaacgggatga
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