Puntigrus tetrazona (Sumatra barb): 122343490
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Entry
122343490 CDS
T08985
Symbol
recql
Name
(RefSeq) ATP-dependent DNA helicase Q1 isoform X1
KO
K10899
ATP-dependent DNA helicase Q1 [EC:
5.6.2.4
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122343490 (recql)
Enzymes [BR:
ptet01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
122343490 (recql)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
122343490 (recql)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
RQC
DUF3130
GPS2_interact
wHTH-PRTase_assc
Motif
Other DBs
NCBI-GeneID:
122343490
NCBI-ProteinID:
XP_043093911
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Position
4:8953947..8961233
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AA seq
793 aa
AA seq
DB search
MANHLEDAQAELDSVEAELEMVELQISELLEKQTKLNSRKNKLLQILEGACSSAQPSGSS
KPPKPSFSKQDFQHYEESDFSWSKEVQASLCSVFQLSKFRPLQRPAINLSMSGKDLFLVM
PTGRGKSLCYQLPALCSKGFTLVIAPLVSLMEDQLMYLKSVDVPAVTLNASSTKDDSKRV
LAGMIDKNSPFKLLYVTPEKIAKSKLLMSKLEKAYNMGLLARIAVDEVHCCSQWGHDFRP
DYKLLGILKRQFPKVPLVGLTATATSNVLKDCQKILCVQEPITLTAPFNRPNLYYEVRFK
DNEGCTDQIAKLIRERYKNQSGIVYVFSQKDAEVVATDLQKRNILAQPYHANMEPSDKSL
VHQRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDGSADCI
VFFGFADIFRISTMVVMENTGQQKLQNMVAYCQNVDRCRRAMMAIHFDEVWNDDECNQMC
DVCRHGNDYITMDITKHARDVVTIVELASSMDEKLTPLKVCDAWLGKGPAKHRKTIQVTS
LSRLEVESIIIHLLLHGYFSEDFSFTPYTTHFYLKLGRKAALLKNASHSITMKMRRRVMS
HSTGEAQEQVETALLDVSNAAIQRHNKTKIYKNHQNMEKRLAQNHIESLASEASEYVKPA
SVFEVDVEVNIVEEQSCESEEEKGLLNSPEQQSSPKRRQNADQAKAALVSAPSELSIISA
AAVEELHHLRSYYSKQLRRINYISHEHLQSSQPGMLTCMREPFKSLHFPSRTTIARGARN
LWTRVSMRRKLIQ
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaccatcttgaagatgctcaagctgaactggactcggtggaggcagagttggag
atggtggagctgcagatctctgagctgctggagaaacagacgaagctgaactccaggaaa
aacaagctcctgcagatcctggagggagcctgcagctcggcccagccctctggatccagc
aaacctcccaaaccatcattcagcaaacaggactttcaacactatgaggagtcagatttc
tcatggtctaaagaagttcaggcgagtctgtgtagcgtgttccagctctctaaatttcgt
ccgctgcagcggccggccataaatctcagcatgtcaggaaaagaccttttcctggtaatg
cccactgggcgaggaaaaagcctgtgctatcaactgccagccctctgctctaagggtttt
acgttggtcatcgccccattggtgtctctaatggaggatcagctgatgtatctgaagtcc
gttgatgtcccggcggtaactctcaatgcctccagtacaaaggatgactccaagcgggtc
ttggcggggatgatcgacaaaaacagccccttcaagttgctctatgtaaccccggaaaaa
atcgccaagagcaagctgctgatgtccaaactcgaaaaggcctacaacatgggtctgttg
gcgcgcattgctgttgatgaagtccactgctgcagtcagtgggggcatgacttcaggcca
gattacaagctcctgggtatcctaaagcgacagttccccaaagtcccattggtcggcctg
actgccactgcaaccagcaacgtgcttaaagattgccagaagattctgtgtgttcaagaa
cccatcactctgacagcaccatttaacagaccaaacctttactatgaagttcgttttaaa
gacaacgaaggctgtaccgaccaaattgcaaaactgattagagaaagatataaaaaccaa
tcaggaatcgtatacgtgttctcccagaaggatgcagaggttgtggctacagacctgcag
aagagaaacattcttgcccagccataccacgccaacatggagccttcagacaagtctctg
gtgcatcagcggtggtcctccaagaagatccaggtggttgttgccactgtggcttttggg
atgggcattgacaaggccgatgtgcgatttgttatccatcacaccatcagcaaatctatc
gaaaattactatcaggagagtggacgtgcaggacgggatgatggctcagcagattgtatt
gtattcttcgggtttgcagacatcttcagaataagcacaatggtggtgatggagaacaca
gggcagcagaagctacagaatatggtagcatattgccaaaatgtggaccggtgtcgccgt
gctatgatggccattcatttcgatgaagtatggaatgatgatgagtgcaaccaaatgtgt
gatgtttgtcggcatggcaacgactacatcacaatggacatcaccaaacatgctcgagat
gttgttactatagtagaactggccagctctatggatgaaaagttgacccctctgaaagtc
tgtgatgcttggttgggaaaagggcccgctaagcatcgcaaaaccatacaggtcacgtca
ctgtcacgcttggaggtggagtccattatcatccaccttttgttgcatggctacttcagt
gaggactttagcttcactccttacacaacccacttctacttgaagctgggccgtaaggca
gctctcctgaagaacgccagtcactccatcactatgaaaatgaggaggagagtgatgtcg
cactcaactggtgaggcacaagagcaagttgagacagccttgcttgatgtgtccaacgcg
gccattcagaggcataacaaaactaaaatctataagaatcaccaaaacatggagaagaga
cttgctcaaaaccacattgaaagtcttgcttcggaagcaagcgagtatgtaaagccagcc
tcagtgtttgaggttgatgttgaggtcaatattgtagaagaacagagttgtgaaagtgaa
gaagagaaaggtcttttaaactcccccgaacagcaatcttcaccgaaaaggaggcaaaac
gctgaccaggcgaaggcggctctggttagcgctccttctgagctctctatcatttctgca
gctgctgtggaggagctacaccacctgcgcagttactacagcaaacagttaagacggatc
aactacatttcccatgagcacttgcaaagctcccagcctgggatgctgacatgtatgaga
gagccattcaaaagtctccatttcccatcgaggacaaccatagccagaggtgcaaggaat
ttatggactcgtgttagtatgaggaggaaactcatacagtga
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