Puntigrus tetrazona (Sumatra barb): 122344474
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Entry
122344474 CDS
T08985
Symbol
rad23aa
Name
(RefSeq) RAD23 homolog A, nucleotide excision repair protein a
KO
K10839
UV excision repair protein RAD23
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03420
Nucleotide excision repair
ptet04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122344474 (rad23aa)
09124 Replication and repair
03420 Nucleotide excision repair
122344474 (rad23aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
ptet03051
]
122344474 (rad23aa)
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122344474 (rad23aa)
Proteasome [BR:
ptet03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
122344474 (rad23aa)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
122344474 (rad23aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
UBA_3
Rad60-SLD_2
Crinkler
OTU1_UBXL
Dsc3_N
UBA_2
Motif
Other DBs
NCBI-GeneID:
122344474
NCBI-ProteinID:
XP_043094064
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Position
1:31750689..31756461
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AA seq
359 aa
AA seq
DB search
MQITLKTLQQQTIQIDIDDEQTVKALKEKIEAEKGRESFPVAGQKLIYAGKILQDDTPIK
EYKIDEKNFVVVMVSKTKAPSPPAPPSEPPKPVAAPSSSSSSPPPPPVPAPAAIPIPRDE
ISDDPPATVSPEASPDRGSGLGADGEDASSTLVRGQEYDTMLTNIMAMGYERDKVVAALK
ASYNNPHRAVEYLLNGIPTVPVQETSPAPAQLPTDTQPAEGENPLEFLRSQPQFQSMRQV
IQQNPSLLPALLQQLGQENPELLQQISQHQELFIQMLNAPVGEGEVEAGEGGEFADLGAL
GDEAAPGSYIQVTQQEKEAIERLKALGFSEALVVQAYFACEKNENLAANFLLNQNFEDE
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgcagatcacgctgaagactttgcagcagcaaaccattcaaatagacatcgacgatgag
cagacggtgaaggcgctgaaggagaagattgaggctgagaagggcagagaaagttttcca
gtagcgggacagaagctgatctacgctgggaaaatcctgcaggatgatacccccatcaaa
gagtacaaaatcgatgagaaaaactttgtggtggtgatggtgtcaaagacgaaagcaccc
agtccaccggctccaccctcagaaccacccaaacctgtggctgcaccttcttcgtcgtcc
tcctctcctcctcctcctcccgttcccgcccctgcagccatccccatccccagagacgag
atttcagacgaccctcctgccaccgtgtctcctgaagcgagccctgaccgtggctcaggt
cttggggctgatggggaagatgcgtcttcaacattagtcagaggtcaggagtatgacacc
atgctcacaaatatcatggctatgggctacgagagagataaagtggtggcggcgctcaag
gccagctacaacaaccctcaccgtgctgtggagtatctgctcaatgggatccctacagtc
ccggtgcaggaaaccagtcccgctccagctcagctccccacagacacgcagcccgcagaa
ggtgagaatccgctggagttcctgcgctctcagcctcagttccagagcatgaggcaggtg
atccagcagaacccgtccttactgcccgccctcctgcagcagctgggacaggagaacccc
gagctcctgcagcaaatcagccagcatcaggagctcttcatccagatgctgaacgcgccg
gtgggtgagggtgaagtggaggccggagagggcggagagttcgctgatttgggtgctctg
ggcgacgaggcggcgccagggagttacatccaggtgacacaacaggagaaagaagccatc
gagaggttaaaagctctagggttttcagaagctctggtggtccaggcgtacttcgcctgc
gagaagaacgagaacctggccgccaacttcctgctcaatcagaatttcgaggacgaatga
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