Puntigrus tetrazona (Sumatra barb): 122344729
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Entry
122344729 CDS
T08985
Symbol
chrne
Name
(RefSeq) acetylcholine receptor subunit epsilon
KO
K04817
nicotinic acetylcholine receptor epsilon
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122344729 (chrne)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122344729 (chrne)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
122344729 (chrne)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
122344729
NCBI-ProteinID:
XP_043094214
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Position
5:complement(14212659..14220080)
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AA seq
517 aa
AA seq
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MADRFGRTCVVAFVLVAAALQVSANEETQLIADKFKNYNKNIRPARHPDEKVKVQVKLTL
TNLISLNEKEETLTTNVWIEIQWHDYRLAWNTSEYHGIDLIRVPYNTVWLPDIVLENNID
GKFDVAYYANVLIWSDGSMYWLPPAIYRSTCAIEITYFPFDWQNCTLVFRSQTYSANEID
MVLAEDADTGKPIEWVDIDPEAFTENGEWAIKHRPARKLTNSRYSPDDLEYQEVYFNIII
QRKPLFYIINIILPCSLISSLVVLAYFLPAKAGGQKLTVSISVLLAQTVFLFLIAQKIPE
TSLSVPLIGKYLIFVMCMTTLIVTNCIIVLNFSLRSPSTHNMSHTIRHIFLEVVPRFLGM
ASFLDEEEPGGGTYEMRERRRSSFGLMQRAEEYVLKQPRSEMMFDKQRERHGLMRSIVDE
IDVSSTANLYKSLAKTAPEIKECVDACNFIAESTKQQNDIGSEMESWVLIGKMIDKVCFW
AAMLLFSVGTVAIFLMGHYNQAPEYPFPWENKKYIPE
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccggttcggcaggacttgtgtagttgcgtttgtactcgtggccgccgcgtta
caagtcagtgcaaatgaggagacccagttaattgcagataagtttaaaaactacaataaa
aatattcgtcccgcaagacaccctgatgaaaaagtcaaggttcaggtcaagttaactctc
accaacctcatctccttgaatgaaaaagaggagactttaactacaaatgtttggattgag
attcaatggcacgattaccgtcttgcatggaatacgtctgagtatcacggcattgatctg
atccgtgtgccatacaacactgtgtggctaccagatatagttctggaaaacaacattgat
ggcaagtttgatgtggcatattacgctaatgtgctgatttggagtgatgggtccatgtac
tggcttccccctgccatctatcgcagtacctgtgctattgagatcacctacttccctttc
gactggcaaaactgcacactagtctttaggtctcagacgtacagtgcaaatgaaattgat
atggtattggcagaagatgcagatacagggaagcctattgagtgggtggacattgaccct
gaggccttcacagaaaacggggagtgggcgatcaaacatcggccggctcgtaagctgaca
aactcacgctactctcctgatgatctggagtaccaagaggtctatttcaacatcatcatc
cagagaaaaccactcttctacataatcaacatcatccttccctgctctctcatctcctct
ctggtcgttctggcctattttctacctgcaaaagctggaggtcagaagttgactgtgtcc
atttctgtactgttggctcagactgtgtttctcttcctgatcgctcagaagattccagaa
acatcactttctgtgcctcttattggcaagtatttaatcttcgtcatgtgtatgaccaca
ctgatcgtgaccaactgcatcattgtccttaacttctccctccgtagtcccagtacacac
aacatgtcgcacactatcagacatattttccttgaggtggtccctcgtttccttggcatg
gcctcatttctggatgaggaggagccgggaggtgggacatatgaaatgagggagaggcgg
cgcagttcgtttgggctgatgcagagagctgaagaatatgttttgaaacagccacgcagt
gagatgatgtttgataaacagagagagagacatggactcatgcgctcaattgtggatgaa
attgatgtgagcagtacggcaaacctctacaagagtttggcaaaaacagcaccagaaata
aaagagtgtgtggatgcctgtaactttattgctgaatccactaagcagcaaaatgacatt
ggatctgagatggagagttgggtgctgattggtaagatgattgacaaggtttgtttctgg
gcagccatgttgctgttttctgttggcaccgtggccatcttccttatgggtcactacaac
caggcacccgagtacccatttccttgggagaacaaaaagtacatacctgagtag
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