Puntigrus tetrazona (Sumatra barb): 122344753
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Entry
122344753 CDS
T08985
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122344753 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122344753 (trpv1)
Ion channels [BR:
ptet04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122344753 (trpv1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_3
Ion_trans
ATP-synt_I
Motif
Other DBs
NCBI-GeneID:
122344753
NCBI-ProteinID:
XP_043094244
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Position
5:15748967..15755185
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AA seq
772 aa
AA seq
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MSKSRDSSPTFFLETDDLTEEERSKAKQKKGASKDKRPMDSNYLDETEQPAQTIKFNLHT
DRGIRKVKEEPAQQDSERFTLKRLFDAVSSGDVSNLQGLHQYLRKNMKRLTDSQYKSNGK
TALLKALLNLKEGENDTIEHLLEIAEKLGDLKNFVNAAYTDSFYKGQTALHVAIERRSAK
FVQMLVKKGADVHAKACGKFFQPNQETCFYFGELPLSLAACTNQPDIVDFLMNNPYQAVD
VRERDSHGNTVLHALVSIADNSPENTEFVIAMYDHILIKADQLHPKIKLEDFENNEDLNP
LTLAAKTGKLGLLKHIVQRELKGRRHLSRKITEWAYGPVCSSLYDLASLDTYGKNSALEI
IVYGSEIPNRLEMLCIEPFNQLIEEKWEKFAKRMFMFNFIVYVIYLFILTAVSYHHETGK
DFNISQSKPPYPYKNNIEGYLLLTGHIITTTGALYFFIRGLIDMLRKRPRFQSLVIDGYT
DQLFFLQAVLFLACVLLYCFSNDEYVACLVLSLALSWVNLLYFSRGFKNMGIYSVMMQKM
VLGEIRRFIVVYMVFLIGFSAAVVTLLDDHSKKGRSFFSEDCKKPPFQGIYFTTLELFKF
TIGMGDLEFTDQYQNIQVFYVLLILYIVMTYILMLNMLIALMNQRVDEMSVESANIWKLQ
RAITTLDMEWIFPRCLRTRLRSGKEKDLGGWQEPDQRWCFSVEEVNWNQWNRNLGVITED
PGKCLPVPSPTKLQREPNQRGLLQTFSKRWTQRQQHRDVQELTPIAETSSSV
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcaagagacagcagccccacattcttcctggagacggatgacctgacagag
gaggaaaggtcaaaggccaaacagaagaaaggtgcctcaaaggacaagagacccatggac
tctaactacctggatgagacagagcagcctgcacaaactattaaatttaacctacacaca
gacaggggtatcagaaaggtgaaagaggaaccagctcagcaggacagtgagaggtttacc
ctcaagaggctgtttgatgccgtgtccagtggcgatgtgtctaacctgcagggtttacat
cagtacctgcgcaaaaacatgaaacgcctcacagactctcaatataagtccaatggaaag
acagccctgctgaaagcacttttaaatttgaaggaaggcgagaatgacactattgaacat
ctgctggaaattgcagagaaactgggagatttgaaaaattttgtcaatgctgcctacaca
gacagtttctacaaaggtcagacagcactccatgtagctattgaacggagaagtgcaaaa
tttgtacagatgctggttaagaaaggggctgatgtccatgcgaaagcctgtgggaaattt
tttcagcccaatcaagaaacatgcttctattttggtgagctgcccttgtcactggccgct
tgcactaatcagccagacattgtggacttccttatgaacaacccttaccaggccgtggat
gtcagggagagggactctcatggaaacacggtgcttcatgcattagtatccatagctgat
aacagtcctgaaaacacagagtttgtcatcgccatgtatgaccacatcttaatcaaagca
gaccaacttcaccccaagatcaagctggaggattttgaaaataatgaagatctcaaccca
ctcacactagctgccaaaacaggaaaactggggctgttaaagcacatcgtgcagcgggag
ttaaaggggcgccgccatctgtcgcgaaagatcacggagtgggcctacggtccggtgtgc
tcatctctctatgacctcgcctctctcgacacctacggcaagaactccgcgctggagata
atcgtttatggcagtgagattcctaatcgcctcgagatgctctgtattgagccatttaac
caactaattgaagagaagtgggagaaatttgcaaaacggatgttcatgttcaacttcatc
gtatatgttatctaccttttcatcttaactgctgtatcttatcaccacgaaacagggaag
gactttaacatcagccagtcaaagcctccatatccttataaaaacaatatcgaaggctat
ctgcttctgacaggacacatcataactactactggagcactttacttctttattagaggg
ttaatagatatgttaaggaagcgtccaagatttcagtccctggtgatagatggatacacc
gatcagcttttttttctgcaggccgtgctcttcctggcttgtgttctactctactgcttt
agtaatgatgaatatgtggcctgtctagttttgagtcttgccttgagctgggtaaatcta
ctctacttctccagagggttcaaaaatatgggaatctacagtgtcatgatgcagaagatg
gttcttggagaaattcgccgattcattgtcgtgtacatggtcttcctcattgggttctct
gcagccgtggtgactctccttgacgatcattccaaaaaggggcggtcttttttttctgag
gactgtaagaagcccccatttcagggcatatatttcaccactctggagttgttcaagttc
acgattggcatgggagatctggagttcaccgatcaatatcaaaacatacaggtcttctat
gtgctgctgattctgtatatcgtgatgacttacattttgatgctgaacatgctgatcgct
ctgatgaatcaaagagtggatgagatgtctgtagagagcgccaacatctggaaactacag
cgtgcaatcaccaccttggatatggagtggatttttccccgctgtctgaggacaaggctg
cgctccgggaaagaaaaggacttaggcgggtggcaggagcctgatcaacgctggtgcttc
agtgtggaggaagtcaactggaaccagtggaacagaaacctgggtgtgattactgaggat
cctgggaaatgcctgcctgtaccttccccaactaaacttcagagagagcccaaccagcgc
ggactcctgcaaacgttcagtaaacgttggacacagagacaacaacacagagatgtacag
gagctgactcctatagctgagacctctagctccgtctga
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