Puntigrus tetrazona (Sumatra barb): 122344768
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Entry
122344768 CDS
T08985
Symbol
sox19a
Name
(RefSeq) transcription factor Sox-19a
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122344768 (sox19a)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
122344768 (sox19a)
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GFIT
Motif
Pfam:
HMG_box
HMG_box_2
SOXp
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
122344768
NCBI-ProteinID:
XP_043094267
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All DBs
Position
5:10946115..10948415
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AA seq
296 aa
AA seq
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MYSMLEHDMKSAVPPTHQSAQGMTQLNGGVTHGAAKAAVNNQQQSSDPMDKVKRPMNAFM
VWSRGQRRKMAQENPKMHNSEISKRLGAEWKLLTDAEKRPFIDEAKRLRALHMKEYPDYK
YKPRRKTKPVLKKDNPAAKYPLSAGNLLAAAAAQGSGGSPRMDSYGWGHTGGYTGMQTDA
LGYSQQLHRYDLSALQYPSAMATAQTYMNGANSYNPMSYSSTPQQPSPVMSMVKPDQVSH
SPTGAHSHQRGPLQGDLRDMISMYIPGGDTTDSGAQRGYSNIQQHYLTGTAPLTHI
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgtacagcatgctggaacacgacatgaaatccgccgtgccaccgacgcaccagagcgca
caggggatgacccagctgaacggtggagtgacgcacggagccgctaaagcggctgtcaac
aaccaacaacagagtagcgatcctatggacaaagttaagaggcccatgaacgcgttcatg
gtctggtctcggggtcagaggcgcaaaatggcacaggagaaccccaaaatgcacaactct
gagatcagcaagcgcctgggcgccgagtggaagctgcttacggacgcggagaaacgcccg
tttatcgacgaggccaagcggctccgcgcgctgcacatgaaggaatacccagattacaaa
tacaagccacgacgtaaaacaaaacccgtgctgaagaaggacaaccccgccgctaagtat
cccctatcggccggcaacttactggcggcggccgcggctcaggggtcgggtgggagcccg
aggatggacagctacggctggggtcacacaggtggctacaccggcatgcagacggacgct
ctgggctacagtcagcagctgcaccgctacgacctgtccgccctacagtatccatccgcc
atggccaccgcgcagacctacatgaacggtgccaactcctacaaccccatgtcttacagc
agcactccccagcagcccagcccagtcatgtccatggtgaaaccggaccaggtgtctcac
tctcccaccggagctcacagccaccagcggggtcctttacaaggagacctgagagacatg
attagcatgtatatccctggtggagacaccacagacagtggagcacagaggggctattcc
aacatccaacagcattacctcaccggtacagcacctctcactcacatctga
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