Puntigrus tetrazona (Sumatra barb): 122344812
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Entry
122344812 CDS
T08985
Symbol
tfdp1b
Name
(RefSeq) transcription factor Dp-1b
KO
K04683
transcription factor Dp-1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03083
Polycomb repressive complex
ptet04110
Cell cycle
ptet04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
122344812 (tfdp1b)
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
122344812 (tfdp1b)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122344812 (tfdp1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122344812 (tfdp1b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122344812 (tfdp1b)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
122344812 (tfdp1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
122344812 (tfdp1b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DP
E2F_TDP
DUF5837
Motif
Other DBs
NCBI-GeneID:
122344812
NCBI-ProteinID:
XP_043094326
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Position
1:complement(2450271..2458808)
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AA seq
393 aa
AA seq
DB search
MAKDAGLKETNGEIKVFVNQNLSPGKPAGVLSFLTVHPASVSAVKQILPKTLTAAGASML
PHVVIGTPQRSSVPAGLLLTSPHTPTTHLQTQETSPWSTGRSRKGDKSGKGLRHFSMKVC
EKVQKKVVTSYNEVADELVAELSSGDNNISPNDAHVYDQKNIRRRVYDALNVLMAMNIIS
KDKKEIKWIGFPTNSAQECQDLEAERQRRVERIKHKQSQLQELILQQIAFKKLVQRNREA
EQQSKRAPPLNTVIHLPFIIINTSKRTVIDCSISNDKFEYLFNFDSMFEIHDDVEVLKRM
GMAFGLESGRCSPEQLKIARTLVPKALQPVSEMAQGAINQLIGELSHVATERGASSSNGS
HHSSSRVETPTSYMEEDEEDEEDEEDFEEDEDD
NT seq
1182 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaagatgccggactcaaagaaaccaatggagagataaaggtgtttgtgaaccag
aacctgagtccagggaagcctgcaggggttctgtccttcctgaccgttcacccggcctca
gtctctgcggtcaaacagattctgcccaaaacgctcacggctgcaggcgctagcatgcta
ccacacgtggtgataggcactcctcagaggagcagcgttcccgccggtctcctgttgacc
agcccacacacaccaaccacacacctccagacccaggagacctcgccctggtccaccggg
cgcagcaggaagggggataagagcgggaagggcttgcggcatttctccatgaaggtgtgt
gagaaggtgcagaagaaagtggtgacgtcctacaacgaggtggcggacgagctggtggcc
gagctgagctccggagacaacaacatctccccgaacgacgcgcacgtgtacgatcagaag
aacatccggagacgggtttacgacgcgctcaacgtcctgatggccatgaacatcatctcc
aaagacaagaaggagatcaagtggatcgggtttcccaccaactctgctcaggagtgtcag
gacctggaggctgagagacagagacgagtggagagaatcaaacacaagcagtctcagctg
caggaactcatactgcagcaaatcgcctttaaaaagctggtgcagcgtaaccgtgaggcg
gagcagcagagtaagagagctccgcccctgaacacagtcatccacctgcccttcatcatc
atcaacaccagcaagagaaccgtcatcgactgcagcatctccaacgacaagttcgagtat
ctcttcaacttcgacagcatgtttgagatccacgatgacgtggaggtgctgaagcgcatg
ggcatggcgttcggtctggagtcgggccgctgcagccccgagcagctgaagatcgccagg
accctcgtccctaaagccctgcagcccgtctcagaaatggcgcagggtgccataaaccag
ctgatcggagagctgtctcatgtggccaccgagcgcggggcgtccagctccaacggctcg
caccacagcagctccagggtggagacgcccacgtcctacatggaggaggacgaggaagac
gaggaggacgaagaggactttgaggaggacgaggacgattag
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