Puntigrus tetrazona (Sumatra barb): 122344943
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Entry
122344943 CDS
T08985
Symbol
arvcfb
Name
(RefSeq) ARVCF delta catenin family member b isoform X1
KO
K28154
splicing regulator ARVCF
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptet03041
]
122344943 (arvcfb)
Spliceosome [BR:
ptet03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
122344943 (arvcfb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
ARM_ARMC5
HEAT_2
HEAT
HEAT_EZ
Cnd1
Atx10homo_assoc
Motif
Other DBs
NCBI-GeneID:
122344943
NCBI-ProteinID:
XP_043094531
LinkDB
All DBs
Position
5:9863630..10028037
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AA seq
1038 aa
AA seq
DB search
MEEYDVPSAASILASVKEQEARFERLTRALEEERRNVSLQLERGSLPSDRLVGGTTGGNN
QPLAWQQMVMQEQSPSNQTSLAMMQEPQEVVEETVTIEEDPGTPTSHVSVVTSEDGTTRR
TETKDNVTNLKVTKVVKTITRRTFQPVILTESKPSTPAPPSTPTPSETKPVTKMVKTVTT
RTVRQVPLGPDGLPLPEGSSPLGSYTDSIDRRYMKNGERFITPQATSTLTRSYNNYSDSY
NDTPESQFRHYALHDGYGDVADNYGSLSRGVNYRPYRPYMPTGGYRPENSYTLPIRKDDY
GHVAQPQVPMGSSTVDLNRSQPERFQPEPYGLEDDRRSLGPDDEETYDLEPDYSTANRRT
LPGRTIREPLRNGPRVRGYEDPIEAELIDERHPYIHGMYPAPLAQPERGSLASLDRMGGR
RSPSIDSIRKDPRWRDPDLPEVIAMLGHPIDPVKSNAAAYLQHLCYENDKIKKDVRQLKG
IPVLVGLLDHPKAEVHRKACGALRNISYGKDHDNKVAIKSCDGIPALIRLLRKTNDMEVR
ELITGTLWNLSSYEPLKMVIINHGLQTMTNEVIIPHSGWEHEPNEDSKPRDAEWTTVFKN
TSGCLRNVSSDGAEARRRLRECEGLVDALLHALQSAVGKKDMDNKSVENCVCIMRNLSYH
VHKEVPGAEKFQDPSALQGPGSAGTQRKKKDDAGCFGGKKAKEEWFNQGRKNGEHDKNYD
TLDLPKRTEPTKGFELLYQPEVVRLYLSLLTESQNYNTLEAAAGALQNLSAGQWTWSNYI
RATVRKEKGLPILVELLRSDSDKVVRAVAIALRNLSIDRRNKDLIGSYAMRDLVSNLPSG
QQRPAKNLEEDTVVAILNTIHEIITDSSENARSLITAQAIDKLVAINRTSQSARETKAAS
HVLQTVWSYKELRNTLTKDGWNKTHFQPIATGTPKGSKSCKPGYDDTTLPLMEKNQGNRG
CSGGDMIPMDELGPDGYSTIDQRDKDSKYKSSDGSSDLQEREPLKNDTNRKHYIRSNRPT
VSLVDACDVKPQPVDSWV
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatatgacgtgccgtcagccgccagtatcctggcatcagtcaaagagcaggag
gcgcgcttcgagcgcctgaccagggcccttgaagaggaacgccgcaatgtctccttacag
ctggaacgcggcagtctgccctctgatcgactggtgggcggcaccacaggcgggaacaac
caaccgctggcctggcaacagatggtcatgcaggagcagagtcccagtaaccagacatca
ctggccatgatgcaagagccccaggaggttgtggaggagactgtaactatagaggaagac
cctggaacacccacctctcatgtttctgtggttacctcagaggatgggactacgcgccgc
acagagactaaggacaatgtgactaatttgaaggtgaccaaggtggttaaaaccatcaca
cgccgaaccttccagccagtgatcctgacagaatccaaaccatctactcctgcacctcca
tctacaccaacaccatctgaaactaaaccagtcactaaaatggtgaagacagtgacaaca
cggacagttcgacaggtgccgctgggtccagatggccttcctcttccagagggctcatct
ccactgggaagctacactgactccattgatcggcgctacatgaaaaacggcgaacgcttc
atcacaccccaggccacttccaccctcacacgctcatataacaattacagcgactcctac
aatgacactccagaaagtcagtttcgccattacgcccttcacgatggatacggagacgta
gccgacaactacggaagtctgtctcgtggggtcaattacaggccctatcgcccctacatg
cccaccggtggataccggccagagaacagctacactctccccattcgcaaggacgactat
ggccatgtggcccagcctcaagtcccaatgggaagtagcactgtggatctcaatcgttct
cagcctgagcgctttcaacccgaaccctacggactggaagatgaccgccgcagtctaggc
ccagatgacgaagagacgtatgacctagagcccgattattccacagctaaccgccgcaca
ctgcccggacgtaccattcgagagccattgcgcaacggcccccgtgtgagaggctacgag
gaccccattgaggctgaattaattgatgaaagacacccctacatccatggcatgtaccca
gcacctcttgcccagcctgagagaggtagcttggccagtctagatcgcatgggcggccgt
cgctccccctcgattgacagcatccgcaaagaccctcggtggagggaccctgacctgcct
gaggtcatcgccatgctaggccaccccatcgatccagtcaaatccaatgcagcggcctac
ctgcagcatctctgctatgaaaatgacaagataaagaaggatgtcaggcagctgaagggg
atcccagtgctggtgggtttgctggaccaccctaaagctgaagtccatcgcaaggcctgc
ggagctttgagaaacatctcttacggcaaggaccacgataacaaggtggccatcaagagc
tgtgacgggattcctgctctcatccgtctgctgaggaaaaccaatgacatggaagttcgg
gagcttatcacaggaacactttggaatttgtcgtcctatgagccactgaagatggtgata
attaaccacgggcttcagacgatgactaacgaggttattatccctcattcgggctgggaa
cacgagccaaatgaggactcaaagccacgagatgcagagtggaccaccgtcttcaagaac
acatcaggatgtctaaggaatgtgagctcagacggtgcagaggcgcgcagacggttgaga
gagtgtgaggggctggtagatgccttgctgcatgctctgcagtcggctgtgggaaagaag
gacatggacaacaaatctgtggagaattgtgtttgcatcatgaggaacctgtcttaccac
gtgcacaaggaggttccaggggctgagaagttccaggacccctcggctcttcagggccct
ggctctgctggcactcagaggaagaagaaagatgacgcaggctgcttcggaggaaagaag
gccaaagaggaatggtttaatcaagggaggaaaaacggagagcatgacaaaaactatgac
acgttggacctacccaagcgcacagaacctactaaaggttttgagttactgtatcagccg
gaggtggtccgactctacctgtccctgcttacagaaagccagaactacaacacgctagaa
gcagcagccggggctctacagaacctcagcgctggacagtggacatggtcgaactatatc
cgggcaactgtgcgtaaggagaaagggctgccaattctcgtcgagctcttgcgctcggac
tcagacaaggtggtgcgagctgtggccatcgctctgaggaacctgtccatcgaccgccgc
aacaaagacctgatagggagttacgccatgagggacttggtcagcaacttgcccagcgga
cagcagcggccagccaagaacctggaggaagacacagtagtggccatcctcaacaccatc
catgaaatcatcactgacagctctgagaatgcccgctctctcattaccgctcaggcaatc
gacaaactagttgccatcaacaggaccagccagtcagcaagggagaccaaagctgcttcc
catgtactacagacggtttggagctataaggagctgagaaacaccctcaccaaggatggc
tggaataaaacacacttccagccgatagcaactggcactcccaaaggatccaagagctgc
aagcctggctacgacgatactacacttcccttgatggagaagaaccaaggcaacagaggg
tgtagcggtggggatatgatacctatggacgaactcggtccagatggctattcgacgatt
gaccagagagacaaagactccaagtacaagagcagcgacggttcgtcggatctgcaggag
cgggagccgttaaagaatgacacaaataggaaacactatatcaggagcaacaggccaact
gtcagtctggtggatgcttgtgatgttaaacctcagcctgttgactcctgggtctaa
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