Puntigrus tetrazona (Sumatra barb): 122344963
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Entry
122344963 CDS
T08985
Symbol
ssrp1b
Name
(RefSeq) FACT complex subunit SSRP1 isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122344963 (ssrp1b)
03036 Chromosome and associated proteins [BR:
ptet03036
]
122344963 (ssrp1b)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
122344963 (ssrp1b)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
122344963 (ssrp1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
HMG_box
POB3_N
SSRP1_C
HMG_box_2
HMG_WDHD1
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
122344963
NCBI-ProteinID:
XP_043094582
LinkDB
All DBs
Position
1:complement(20230590..20241854)
Genome browser
AA seq
704 aa
AA seq
DB search
MSDTLEFNEIYQEVKGSWNDGRLRFSKQTVVYKNSKTGKVDSIPVPELSQAQWRRVCLGH
GIKLCTSTGNIYKYDGFKDTDLEKISEYFKANYKVELVEKDMCVKGWNWGTAKFNGPLLS
FEVNESPAFEIPLASVSQCATGKNEVTVEFHQNDDSEVSLMEVRFYVPPTTGDEGSDPVE
AFAQNILSKADVIQATGDAVCIFRELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMNEDEVERRFE
GKLHKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEIACVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGFKEKKGMKGNDDMYSDSDDDQHDAYLERMKEEGKIREEANDSDDSEGESD
ESFNPGEEDDEIAEEYDSKASASESSADDGDSDGDRKKKPAKKAKFVKERKPRKKEKKAK
DSSAPKRPMSAYMLWLNSSRDRIKSENPGISITEISKKAGEMWKQLSKEKKEEWEAKAEE
AKKEYDRVMREYKESGGGSSGSSKKERKKKGGKNEEKRKRKSGGGREKEKERATGNDSFK
SREFISSEESSSESDKGKGRKRKGSDDEEEVVSTPPSSEESGSD
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacactctggaattcaatgaaatttatcaggaggtcaagggctcctggaacgat
gggcgtcttcgcttcagtaagcagacagtggtgtataaaaatagtaagaccgggaaggtg
gacagcattccggtgcctgagctttctcaagcccagtggaggagagtctgtctgggtcat
ggcatcaagctgtgcaccagcactggaaacatctacaaatatgatggctttaaagacaca
gaccttgagaagatctcagagtacttcaaagccaactacaaagtggagctggttgagaaa
gatatgtgtgtgaagggttggaattggggcactgctaaatttaatgggcccttgctttca
tttgaggtgaatgagagtcctgcgtttgagattccgctcgccagcgtgtctcagtgtgcg
acgggaaagaatgaagtcaccgtggagtttcatcagaatgatgactcagaggtatccctc
atggaggtgcgcttctatgtcccacccaccacaggggacgagggctcagaccctgtggag
gcatttgctcagaacattctgtccaaggcagatgtcattcaggcgactggagatgctgtg
tgtatcttcagagagttgcagtgcctcacacctaggggcaggtacgacatccgcatttat
ccaacattcctccatctgcatggtaagacatttgactacaagatcccatacaccacagtg
ctgcgccttttcctgttgcctcataaggaccagcggcagatgttctttgtgatcagtctg
gacccacctattaaacaaggtcaaacccgctatcattttctcattctcctgttttcaaaa
gaagaggatatcaaccttactctcaacatgaacgaggatgaggtggagaggcgttttgag
gggaaacttcataaaaacatgtctggctctctctatgagatggttagcagagtcatgaag
gccctggtcaacagaaagatcacagtgcctggaaatttccaaggtcactcaggagctcag
tgtataacatgttcatataaggccagttcagggctgttgtatcctctggaaagaggtttc
atctacgttcacaagcccccagtgcacctacgctttgaggagatcgcctgcgtgaacttt
gctcgtggaaccaccacaacccgctcctttgatttcgagattgagaccaagcagggaaat
cagtacaccttcagcagcatcgagagggaggaatatgggaaactctttgactttgtcaat
gctaagaagttaagcatcaagaacagaggcttcaaagagaaaaagggcatgaaaggtaac
gatgacatgtacagcgactcagacgacgaccagcatgacgcatacctggagcgcatgaaa
gaagagggcaagatccgcgaggaggccaatgacagtgacgactcagagggcgagagtgat
gagtcttttaatcctggagaagaagatgatgaaattgcagaagagtatgacagtaaggcc
tctgccagtgaaagcagcgctgatgatggggacagtgatggcgatcggaagaagaaacca
gccaagaaagctaaatttgtaaaagaaagaaaaccacgaaagaaagagaaaaaggcaaag
gacagtagcgcccccaagaggccaatgagtgcctacatgctctggttaaactctagcaga
gaccgcattaaatcagagaacccgggcatctctatcacagaaatctctaagaaggctgga
gaaatgtggaaacaacttagcaaagagaagaaagaggaatgggaggcaaaagcagaggaa
gcaaagaaagagtatgaccgggtgatgagagagtacaaggagagtggaggaggctcctca
ggcagctccaaaaaggagagaaagaagaaaggagggaagaatgaagaaaagaggaaaagg
aagtctggtggtggtagggaaaaagagaaggagcgcgctacaggcaacgatagctttaag
agtcgagagttcatatccagtgaagagagctcgtcagagtcagacaaaggcaagggacgg
aaacgcaaggggtctgatgatgaagaggaagtggtcagcacaccgcctagctctgaagag
tccggctcagactaa
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