Puntigrus tetrazona (Sumatra barb): 122345091
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Entry
122345091 CDS
T08985
Symbol
grin1b
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1b isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04020
Calcium signaling pathway
ptet04080
Neuroactive ligand-receptor interaction
ptet04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
122345091 (grin1b)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
122345091 (grin1b)
04082 Neuroactive ligand signaling
122345091 (grin1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ptet04040
]
122345091 (grin1b)
Ion channels [BR:
ptet04040
]
Ligand-gated channels
Glutamate (ionotropic)
122345091 (grin1b)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
SIP
Peripla_BP_6
DUF6724
DUF3663
Motif
Other DBs
NCBI-GeneID:
122345091
NCBI-ProteinID:
XP_043094854
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Position
5:8647747..8673117
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AA seq
937 aa
AA seq
DB search
MRLVLFAFLISCSCARGGCEPKTVNIGAVLSQKRYEQVFKDAVTQANNIYGKDKFKMNAI
SVTHKPNAIQMALSVCEDLISNQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAQVWFDMMREFQWNHIILIVSDDHEGRAAQKRLETL
LEERETKSKNRNYENLDQLSFDNKRGPKAEKVLLFSQDTNLTALLQEAKELEARVIILSA
SEDEAAAIYKAARQLNMTGSGYVWLVGEREMSGKALSEAPDGLLGLQLINGKNESAHIYD
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPDGLTGRVEFNDD
GDRRFAHYSILNYQKTRLVQVGVYNGSQVVMNAQRKIIWPGGETEKPKGYQMSTRLKIVT
IHQEPFVYVKPTLRDGTCKEEYTVNGVLIKKVICTGPNETIPGRPIVPQCCYGFCIDLLI
KLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLSGLADMIVAPLTINNERA
QYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFS
PFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIV
ASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYR
HMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRK
DSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGI
VAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKASFRSIS
TNLASNIKRRRSSKDTPYPTDITGQLNLSDPSVSTVV
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctggttctgttcgccttcctcatctcgtgctcctgtgcgagaggcggatgcgaa
cccaagactgtgaatatcggggctgtcctgagccagaagagatacgaacaagtgttcaaa
gacgccgtcacccaagccaacaatatttacggcaaagataagttcaagatgaacgctatt
tcagtcacccataagccaaacgccatccagatggcactctccgtgtgcgaggatctcatc
tctaaccaggtgtatgcgatcttagtgagccacccaccccagtccaacgatcacctgact
cccactccggtgtcctacacagctggtttttaccgtatccctgtagtgggcctcaccacc
cgcatgtccatctactctgataagagcatccacctctccttcctgcgcacggtgccgccg
tattcccatcaagcccaagtgtggtttgacatgatgcgtgagttccagtggaatcacatc
atcctgattgtgagtgacgaccacgagggcagagcggcacagaaaagactggaaaccctg
ttggaggaaagggagacgaagagtaaaaacaggaactatgaaaacctcgaccaactgtcc
tttgacaacaagcgaggacccaaggcagagaaagtgctcctgttcagccaagacacaaat
ctgacggctctgctccaggaagccaaagagctagaggcccgagttatcatcctgtctgca
agtgaagacgaagccgcagccatttacaaagcagctcgccagctcaatatgacaggctct
ggttatgtgtggctggttggagaaagggagatgtctggtaaagcactgagtgaagcccca
gatggcttgctcggccttcagcttatcaatggcaagaacgagtctgcgcacatctacgat
gccgtggctgtggtggcccagtccattcaggagctctttgagaaggagaatatcacagag
cctcctcgaggctgtgttggcaatacaaacatctggaagactggcccactcttcaaacga
gtgctgatgtcatccaagtatccagatggcctgacaggccgcgtggagtttaatgatgac
ggagacaggaggttcgcccactacagcattctgaactaccagaaaacccggctggtgcaa
gtgggcgtatacaatggctcgcaagttgtaatgaacgctcagaggaagattatttggcca
ggaggagagactgaaaaaccaaaagggtatcagatgtcaacaagattaaagattgtcacc
attcatcaagagccctttgtctatgtgaaaccaacgcttcgagatggaacatgtaaggaa
gagtacactgtaaatggagtcctgatcaaaaaagtgatctgcactggccccaatgagacc
attccaggtcgtcccatagtgcctcagtgctgctatgggttctgcattgaccttttgatc
aagcttgcaatgacaatgaacttcacttacgaagtgcatctagtggctgatggcaaattt
ggcactcaggagcgtgtgaataacagcaacaagaaggagtggaatggcatgatgggagag
ctcctgagtggcttggcagacatgatcgtggctccacttacaatcaacaatgaacgagcc
cagtatatagagttctcgaaaccgttcaagtaccaggggctcacgatacttgtcaaaaag
gaaataccacgcagtacactggactcgttcatgcagccttttcagagcactctgtggtta
ctggtgggtctatcggtccatgttgtggcggtgatgctctacctattagaccgtttcagc
ccgtttggaaggtttaaagtaaatagcgaagaggaagaagaagatgccctcacgttatcc
tctgctatgtggttctcctggggtgtacttctgaactccggcattggagaaggtgcccct
cggagcttttcagcgaggattttaggtatggtgtgggctggttttgctatgattatagtt
gcatcttatactgccaatttggcagccttcctggtgctggatcggcctgaggagcgcatt
accggcatcaacgaccctaggctgcgaaacccatcagacaagttcatctacgccacagtg
aagcagagctctgtggacatttacttccggcgccaagttgagctaagcaccatgtaccgc
cacatggaaaagcacaactacgagagcgccgctgaagccatccaggccgtgcgagacaac
aaactccacgcgtttatatgggattcagcagtgttggagtttgaggcctcgcagaaatgt
gacctggtcaccacaggggagctgttcttccgctctggattcggtatcgggatgcgtaaa
gatagcccgtggaagcaaaatgtctcactggccatcctcagttcccatgagaatggcttc
atggaggacttggataaaacctgggtccgttatcaggagtgtgactccagaagcaatgca
ccagccacactcactttcgagaatatggcaggcgtttttatgttggtggctggtggcatc
gtcgccgggatcttcctcatcttcattgagatcgcgtacaaacgacacaaggatgcacgc
aggaagcaaatgcagctggcttttgcagcagttaacgtctggaggaagaacttacaggat
aggaaaagtggtagagcagagcccgaccccaaaaagaaagcctcttttaggtccatcagt
accaacctggcctccaacatcaagagacgtaggtcgtccaaagacacgccatatccaacg
gacattaccggccagctcaacctgtcagacccctctgtgagcacagtggtgtga
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