Puntigrus tetrazona (Sumatra barb): 122345122
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Entry
122345122 CDS
T08985
Symbol
rnf170
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptet04121
]
122345122 (rnf170)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122345122 (rnf170)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122345122 (rnf170)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-C3HC4
zf-RING_5
zf-C3HC4_3
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
zf-C3HC4_4
TRAF3_RING
Motif
Other DBs
NCBI-GeneID:
122345122
NCBI-ProteinID:
XP_043094885
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All DBs
Position
5:complement(30087966..30093576)
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AA seq
354 aa
AA seq
DB search
MEASVCLDDSMAPDEGSLIEGVSDPVLLVLVLSVTFLVGLATLLCRNEQQRIHPDNQEHV
RVVREQLQSEQVRQIRFIYQSPVLLLFIQARSYALYLGHELEAKCKNIPRFSFRPLGFAS
DPLAPPPLAPSNHQPASAVCQELKLAGEVRSSAEETISSQEKISFYISKHPFWPLIIIIH
CPGISSTETNCGHLFCGPCIIAYWRYGTWLGAINCPICRQMVTLLFPLFHDTGLSAQTPD
GQVEPALVLSDINDYNRRFSGQPRSLLDRLRDVPTLLRHAFREMFSVGGLFWMFRIRILL
CVLGALTYLASPLDFIPEGVVGLLGFMDDFFVILLLFIYISIMYREVVTQRLAG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgagtgtgtgtttggacgactcgatggctccagatgagggctctctgattgaa
ggagtgagtgaccccgtgctcctggtgctggtcctcagcgtcacctttctggtgggtctg
gcaacgctgctctgcaggaatgagcagcagaggattcatccggacaatcaggagcacgtg
cgagtggtcagagagcagctgcagtccgagcaggttcgtcagatacgcttcatttatcag
tctccggtgctcctgctgtttattcaagctcgctcttacgctctatatttgggtcatgag
ctggaggccaagtgtaaaaatatccctcggttcagcttcaggccgctcgggttcgcctct
gacccgctggccccgccccctctggccccgtccaatcaccagcctgcttctgctgtctgt
caggagctaaaactagcaggtgaagttagatcctcagcagaggaaacgatttcaagtcag
gagaaaatatcattctacatttccaaacatccgttttggccattaatcataataatccac
tgcccaggcatcagttctaccgagactaactgcggtcatctgttctgtgggccgtgcatc
atcgcttactggcgatacgggacgtggctcggagccatcaactgcccgatctgcagacag
atggtgaccctgcttttcccgctctttcacgacacggggctgagcgctcagacgccggac
ggtcaggtggaacccgcgctggtcctcagcgacatcaacgactacaaccggcgcttctcc
ggccagccgcgctccctgctggaccgtctcagggacgtccccacactgctgcggcatgcc
ttcagggagatgttctccgtgggtggtctcttctggatgttccggatccggatccttctc
tgtgttctgggagctctgacctatctggcctctccgctggacttcatccccgagggcgtg
gtggggctcctcggcttcatggacgacttctttgtcatcctcctgctcttcatctacatc
tccatcatgtaccgtgaggtggtgacgcagcggctggccggctga
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integrated database retrieval system
