Puntigrus tetrazona (Sumatra barb): 122345135
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Entry
122345135 CDS
T08985
Symbol
lamc3
Name
(RefSeq) laminin subunit gamma-3
KO
K06247
laminin, gamma 3
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04510
Focal adhesion
ptet04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122345135 (lamc3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122345135 (lamc3)
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
EGF_laminin
EGF_LMN_ATRN
Laminin_B
Motif
Other DBs
NCBI-GeneID:
122345135
NCBI-ProteinID:
XP_043094901
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All DBs
Position
5:complement(6282774..6343615)
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AA seq
1642 aa
AA seq
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MDSSTLHSLLFLLFTFFSHAIAGMDSCYDEKGVPSRCLPKFENAAFNRTVIVSNVYGIPP
EDYCMQTGSTRSCHFCDAMDLELNHNATYLTDFHTDEEPTWWQSQSMFYGVQYPTSVNIT
LHLGKAFEITYVRLKFYTSRPESFAIFKRTDENGPWQPYQYYSASCHKMYRRHNKGFIRP
GENERTALCTDEFSDISPLTGGNVAFSTLEGRPSAYNYDQSPVLQDWVTATDILISLDRL
NTFGDEFFKDPKVLRSYFYAISDFSVGGRCKCNGHATDCFTNEEGRLVCACEHNTAGVDC
QHCAPFYQDRPWTRATADSANQCVRCNCSGLADECVFDAEQYRSTGSGGHCVGCRENTAG
PHCERCRENFFRSLAERTCQNCNCNAMGSVSLQCDAEGVCMCWPGVSGVKCDICKSGFHS
LGPGGCRLCECDNRGSLGVCSVEDGRCHCKTNVEGQSCNRCKPGSFNLQLGNPDGCKKCF
CFGHSLACSSSNQYMAINITSDFLEDPDGWKGVFTTGQEQSLIWKEGEVYLLPYREENGF
YRAPDKYLGNRLLSYGRTLSVSFTAELEELLPRSVTVMLEGSGVSVTADLYSQQETYSSL
EKMPINTFTLRLTEKNVNPSVAPFEFLRMLYNLTALRISNAGGQNYTSQLSRVSLESAVR
TNYNTAPHVWWVEECTCPVGFTGQFCEHCAPGFTRETPNGGPFSHCVPCSCNQHGTCHPE
TGVCDCRDFTTGHYCELCEDGYYGNALTGSPGDCLPCPCPDHTTCAQVPETGDVVCTNCP
TAQRGVRCELCEDGFYGNPLGWGGKVQPCLRCECNGNVDPNAVGVCDHMTGRCLKCLGHT
TGDHCEKCRSGYYGNALANELNPERKCKPCACNVAGTSGSPNDCHPDTGKCVCLSHVTGR
DCGRCETGYFNLQPGLGCEMCNCNPIGSSSSACHPVTGQCVCRTGVEGQSCDTCRMGFFG
FSSRGCRACNCDPMGSSLMQCHDNGTCSCRHGFVGYKCDKCELNYYQSRLTHQCEECPVC
YSLIRDQASKLKARLQELETLLSSYDCNRYSRHYRGRQQHRHQYTGLDNHIQKDQVEDYL
PNALEDLLAIQEAREAFIKQFSQLETSAQTLQLQLRSIATALNCSLTDSGEVREQEQTPK
GENECEELGDTLSAALNMQGQLKKMTLDLNSMAIPPVIPKEPNKWNTIVNESEVLAKSHT
DAAAHIERIAEDAFKMANRTYSQLITLLEDNSTESYVQDLTEKLEEMQRLKESLTLEVNE
TLVTHLSLQSRNSEIAAILENITASLSDLRRTDGTFGLTAQESNITSFSQTLNQTNVTAT
QDPEIAEIKDLMNRTAELDVSVQSQEHLINKTMEETQPHVDSVEKHLKTVQELKQLTDVA
EGFRVSAVSSVVTGKEVEAEILSLQKGLEDVEQDWPQLPTYSKGYLEREKGLNGKTLVEV
KKRVKLTERMIKPAVENATAVSSTAKQAQESADAVAKDAKASLTQGKRTKHASGQLRSAA
DTTLERLTELESRASRKQEAVEGEEDIQLSSRSVTDSMETAKSQLESFTNTLTLLLKQLD
ANAALESYDRILNETAARLRVLQGAVESPSLTGKIQRLHGAARDQEKELRHLEQSLQELR
EERDSLTDIAQNLPKTCPQKGH
NT seq
4929 nt
NT seq
+upstream
nt +downstream
nt
atggattcctctacacttcactctcttttatttctgcttttcaccttcttctctcatgct
atcgctggaatggactcttgctacgatgagaagggcgtcccgagccgctgtttgcctaaa
tttgaaaatgcggccttcaatcgcacagtgatcgtttcaaatgtttacggtatcccacct
gaggactactgcatgcaaacagggtccacacggtcatgtcacttctgtgatgccatggac
ttggaactgaatcacaacgctacttacctgacagacttccacacagatgaagagcccacc
tggtggcagagccagtccatgttctatggagttcagtatcctacttcagtcaacatcaca
ctgcatcttggcaaggcctttgagatcacatatgtccgtttgaagttctacaccagccga
ccagagagcttcgccatctttaagcgcaccgatgagaacggaccatggcaaccgtaccaa
tactacagtgcttcctgtcacaagatgtacaggaggcacaataagggcttcatacgtcca
ggagagaacgaaaggacggcactctgcacggatgaatttagtgacatctcacctctaacc
ggcggaaatgtggccttctccacattggagggacgacccagtgcctacaactacgaccag
agtcctgtgttacaggactgggtgacagctactgatatcctcatctctctggacagactg
aacacttttggagacgagttcttcaaagatcccaaagtgcttcgttcatatttttatgcc
atatccgatttctccgtggggggcaggtgcaagtgtaatggccatgccactgactgcttc
accaatgaggaggggcgtttggtgtgtgcttgtgagcacaacaccgcaggggtggactgt
cagcactgtgcccccttctaccaggaccggccgtggacacgggccaccgccgattcagcc
aaccagtgtgtgaggtgtaactgcagcggtcttgctgatgaatgcgtgtttgatgctgag
cagtaccgcagcacaggaagtggggggcactgtgtcggctgcagggaaaacacagctggc
cctcactgtgagagatgcagggagaacttcttcagatccttagccgagcggacatgccaa
aactgtaactgtaatgcaatgggctctgtgagtttgcagtgtgatgcagagggagtgtgt
atgtgctggccaggtgtgtctggtgtgaagtgtgacatttgcaagtccggtttccattct
ctcggccctggcggatgcaggttgtgtgagtgtgataacaggggcagtttaggagtgtgt
tcagtcgaagacggacgctgccattgcaagactaatgtggagggtcagtcctgcaacagg
tgtaaaccaggctctttcaacctccaactgggaaacccagatggctgtaaaaaatgcttt
tgctttggacactccctcgcctgttcgtcctccaatcagtacatggcgattaatattact
tcagacttcctagaagatccagatggctggaagggtgtgttcactacagggcaagaacaa
tctctcatctggaaggagggagaagtctatctgttgccctacagagaggagaatggcttc
tacagagcacctgataagtacctggggaacaggttgctaagttacggacggacccttagc
gtgtcatttacagctgagctggaggaactcttgcccagaagtgtgactgtgatgcttgag
ggctccggagtatctgttactgctgatttgtactcacaacaggagacttattcctcattg
gagaagatgcccatcaacaccttcactctcaggttaacagagaagaacgtaaatccatct
gttgccccatttgagtttctccgaatgctttacaatctaactgcactacgtatcagcaat
gcaggcggccagaactacacctcccagctctccagggttagccttgaatctgcagtccgc
acaaactacaatacggctccgcatgtttggtgggtggaggagtgcacttgtcctgtagga
ttcactgggcagttctgtgaacactgcgctcctggattcaccagagaaacccctaacggc
ggacccttctcccattgtgtaccttgcagctgcaatcaacatgggacctgccatcctgag
acaggtgtatgtgactgcagagatttcaccacaggtcattattgtgagctttgcgaagat
ggttactatggcaatgcgctgactggcagcccaggcgactgcttaccttgtccttgtcca
gatcacaccacctgtgcccaggtgccagagacaggggatgtggtttgtaccaactgtcca
acagcccaaaggggtgtacggtgtgaattatgtgaagatggtttctatggcaaccctctg
ggctggggaggcaaagtgcaaccgtgtttgaggtgcgagtgtaatgggaacgtggatccc
aatgcagttggtgtgtgtgatcacatgactggacgctgtctgaaatgcctgggacatacg
accggggaccattgtgaaaaatgcagatcgggttactacggcaacgctttggccaatgag
ctcaatccagagcgaaagtgcaaaccttgcgcctgtaacgtggctgggacatcgggatcg
ccgaacgactgccacccggatacaggaaaatgtgtatgcctgagtcacgtgacagggaga
gactgtggacggtgtgaaaccggctatttcaacctacagccaggcttgggctgcgagatg
tgtaactgcaaccccattggctcctcctcttcggcgtgtcatccggtcacgggacagtgt
gtgtgtcgaacaggtgtggaggggcagtcgtgtgacacttgtcgaatgggattctttggt
ttctcctctagaggctgcagagcatgtaattgtgaccccatgggctcgtccttgatgcag
tgccatgacaacgggacgtgttcttgtcgccacggatttgttggttataagtgtgacaag
tgtgaactgaactactaccaaagccgcctgacccaccaatgtgaggagtgccctgtgtgc
tacagcctcatcagagaccaggccagtaaactgaaggccagactgcaggagttggagacg
ctgctcagcagctatgactgcaatagatacagtcggcattatcgtggacgccagcagcac
agacaccaatacaccggcctggacaatcacatacagaaggaccaagttgaagactatctg
cccaatgccctggaagacctcctagctattcaagaggctcgtgaggccttcattaagcag
ttctcacagctggaaacatctgcccagaccttacagctgcagctgcgtagcattgcaaca
gcattgaactgcagcttaacagacagcggagaagttagagaacaagaacagactccgaag
ggtgaaaacgagtgtgaagagcttggtgacactttatccgctgctctgaatatgcaaggc
cagcttaagaagatgactcttgaccttaacagcatggccatcccgcctgtaatccctaaa
gaaccaaacaaatggaacaccatagtgaatgagtccgaggtgctagcgaaaagtcacaca
gacgctgcagctcacatagagcggatagcagaagatgcctttaaaatggctaacagaacc
tattcacagctaatcacgttactggaagacaactccacagagtcctatgtacaggatctc
acagagaagctggaggagatgcagcggttgaaggagagtctgactcttgaggttaatgag
accttagtgacacacctgtcgcttcagagccgcaactccgaaatagccgccattttagag
aatatcaccgcctcgctgtctgacctacgcagaacggatggcactttcggcctcacagcg
caggagtccaatataacgtctttctcgcagacgcttaatcaaacaaatgtaacggcaacc
caggatcctgaaatcgcagagattaaggacctgatgaacaggacagctgagttggatgtt
tctgtccaatcccaagaacatttgataaataagaccatggaggaaacacagcctcacgtg
gacagtgttgaaaaacacctgaaaaccgttcaagagctcaagcagctgacggatgtggct
gagggatttagggtgtcagccgtctcctctgtggtgacagggaaagaggttgaggcggag
atcctgtctttacagaagggtctggaggacgtggagcaagactggcctcagctgcccaca
tatagcaaaggatatctggagagagagaaggggctaaatgggaagaccctggtggaagtg
aaaaaaagagtcaagctgacagagagaatgatcaagcctgcggtggagaacgctacggct
gtgagcagcacagctaaacaagcccaggagtctgcagatgcggtggctaaagatgccaaa
gcgtccctcacgcaggggaaacggactaagcatgcatctggacagttgcgctcagctgcg
gacaccaccctggagcggttgactgagctggaaagccgagcttcacggaaacaagaagcc
gtagagggagaggaggacatccagctttcttcaaggagtgtgacagacagcatggagacg
gccaagagtcagctggagtcctttacaaacacgctaactctgctccttaaacaactggat
gctaatgcggcgctggagagctatgatcgcatcctgaacgagacggcagcccgtctccgc
gttctccagggtgctgtggagagtccgtctctcaccggaaagattcagaggctccacggc
gctgcgcgcgatcaagagaaagagctgcggcatctcgaacagagcctgcaggagctacga
gaagaaagagacagtctgacagacatcgctcagaacttgcctaaaacatgcccacaaaaa
gggcactaa
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