Puntigrus tetrazona (Sumatra barb): 122345149
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Entry
122345149 CDS
T08985
Symbol
lrsam1
Name
(RefSeq) E3 ubiquitin-protein ligase LRSAM1 isoform X1
KO
K10641
E3 ubiquitin-protein ligase LRSAM1 [EC:
2.3.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122345149 (lrsam1)
04121 Ubiquitin system [BR:
ptet04121
]
122345149 (lrsam1)
Enzymes [BR:
ptet01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122345149 (lrsam1)
Membrane trafficking [BR:
ptet04131
]
Autophagy
Xenophagy
Other xenophagy associated proteins
122345149 (lrsam1)
Ubiquitin system [BR:
ptet04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122345149 (lrsam1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_14
LRR_8
zf-C3HC4_3
LRR_1
LRR_4
SAM_1
Prok-RING_4
SAM_2
zf-RING_2
LRR_LRWD1
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
122345149
NCBI-ProteinID:
XP_043094919
LinkDB
All DBs
Position
5:7124060..7133933
Genome browser
AA seq
723 aa
AA seq
DB search
MFLFSKKKKPSEDSVKRLEYQLCLAKEAGADDILDISACELTEVPSCAFSICKVLQKKVL
ILHGNDLRSLVPKGCCIGALATLKVLDLHENKLTSLPDGIGQLLSLQVLNVEKNHIKQLP
DSIGDLRHLQTLNVKGNSLSVIPASVGHMSSLRTLDMSENGIRELPKELANVRTLESLIL
DAQVMRYPPASVCTAGTEEVQRYLCSEMGLEYCPPSQYLLPVLEHDGGKEEEDSVDGEEM
AWQSKFMDYEKRKEQKHLEKLIFEKDLEEKQREHTQLLLLNNSHKEDVLLSVKLEQQRLE
LGVSQQQKAQETERQKMLEKVRLAENNIMSRISDLLLDSKRQAKSAEFLQALEEDRIRME
HLTAITQDEANSLRKKEVASAMQRMLSESYSVRLLQEAREAKTQILVSETCMSLDYMDRR
FDQVLSLQQLDKSKAISQILEEEEMQKAAFEALQLQKDSVHAYIRNQIKLIEAELMQLTK
LEVKRRNLDTENLQEVLADQRTALTDLLQQLLKQKDQREEELRIVLMAMEQKSESNQQNY
WMIQYQRLLDAKPLSLRMQEAAVNADLGSLLCKLSAQHYLPIIAHHRITAEALRHMTARD
LRKLGINEVGVQKALLHWARERTLSDPLPKTAKEMQEAGPSTPSAPLQQQLTPPLTPSTP
LTPTAPSPDRWSSSECVVCMERESQVIFLPCGHVCCCQTCSDALQSCPLCRGSLSQRVRL
YHG
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgttctccaaaaagaagaaaccaagtgaggattcagtaaaacgcctggaatac
cagctatgcttggccaaagaagcaggcgctgatgatattctggacatttctgcctgtgag
cttacagaggttccctcctgtgccttctccatatgtaaagtcctccagaagaaagtgtta
attcttcatggaaatgacctgaggtcacttgttcctaaaggttgctgcattggtgcctta
gcaaccttaaaggtgttggacctgcatgaaaataagctcacgtcacttcctgatggcatt
gggcagcttttgtccttgcaggtgctgaatgtagagaagaaccacattaaacagctgccg
gactctataggggatcttcggcatctacagacacttaacgtgaaagggaacagcctctct
gtcattcctgcatctgtgggacacatgagtagcctgcgtacactagacatgagcgagaac
ggcattagagaattacctaaagaactggccaatgttcgcactttggaaagcctgatcctg
gatgcacaggttatgagatatccacctgcgtcagtgtgcacggccggcacagaggaagtg
cagcgctacctctgttcagagatgggtctggagtattgccctccatcacagtatctgctg
cctgtactggagcatgatggagggaaggaggaggaggattctgttgatggcgaagagatg
gcctggcagagcaaattcatggactatgagaaaagaaaggagcagaaacatctggaaaag
ttgatctttgagaaagatcttgaagagaaacagagagagcacactcagctcctcctgctc
aacaactctcacaaagaggacgtcctgctgtccgtcaaactggagcagcaaaggttggag
ttaggtgtgtctcagcagcagaaggcccaggaaacagagaggcagaaaatgctggaaaaa
gtacgcctggcagagaacaatatcatgagtcgcatctctgacctcctgcttgatagcaaa
cgccaggcaaagagcgccgagtttctgcaagctctggaggaagaccgtatacgaatggag
caccttaccgctatcacacaggatgaagccaattctctcaggaagaaggaagtggcaagt
gccatgcagaggatgctgtcagagagctactctgtaaggttacttcaggaggccagggaa
gccaagacacagattctggtgtccgagacctgcatgagtttggactatatggacagaagg
tttgaccaggtgttgtctctacagcagctagacaaaagcaaagccattagtcagatcctt
gaagaggaggaaatgcagaaggccgcctttgaagccctccaactccagaaggacagcgtg
catgcttatatccgtaatcagattaaactcatagaggcagagttaatgcagttgacaaag
ctggaggttaagaggaggaatttggacacggagaatctgcaggaggtgttagctgaccag
aggactgctctgactgatctactgcagcagttactcaaacagaaggaccaaagagaggag
gaactcaggatagttttgatggcaatggagcagaaaagtgaatccaatcagcagaactac
tggatgatccagtatcagaggctcctggatgccaaacctctgtctctgcggatgcaggag
gcagctgtaaatgcagatctggggagtctgctgtgtaaactctcggctcaacactacctg
ccaatcatagctcaccaccgaatcactgctgaggccttgcgacacatgaccgctcgagac
cttagaaagttggggatcaatgaggtcggagtgcagaaagctcttctccactgggccaga
gaacgcactctgtctgacccattgcctaaaacagccaaagagatgcaggaagctggtcca
tccaccccaagcgccccacttcagcagcagctcactcctccactgacccccagtaccccc
ctcacccccactgccccaagtcctgatagatggagcagctccgagtgtgtggtgtgcatg
gagcgtgagtcacaggtgatcttcctgccatgtgggcatgtatgctgttgccagacctgc
agcgatgccctgcagtcctgccctctgtgccgtggctccttatctcagcgggtccgtctt
taccacggctga
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