Puntigrus tetrazona (Sumatra barb): 122345162
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Entry
122345162 CDS
T08985
Symbol
unga
Name
(RefSeq) uracil DNA glycosylase a isoform X1
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122345162 (unga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122345162 (unga)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
122345162 (unga)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
122345162 (unga)
Prokaryotic type
122345162 (unga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
PTHB1_CtH
Motif
Other DBs
NCBI-GeneID:
122345162
NCBI-ProteinID:
XP_043094960
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Position
5:complement(26897463..26901674)
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AA seq
300 aa
AA seq
DB search
MFSNTGCLRLLRAQMSDFFVKRTRSSTRCIKILSQEKKQKLESDGVTSSPSLSPEQLERI
SNNKKAALKRLAANQAEPNRIGESWREALNAEFGKPYFKSLMSFVAAERQKHTVYPPENE
VFTWTQTCDIKDVKVVILGQDPYHGPNQAHGLCFSVQRPVPPPPSLLNIFKELASDVEGF
EQPGHGDLTGWAKQGVLLLNAVLTVRAHQANSHKDKGWETFTDAVIHWLSTNTQGLVFIL
WGSYAQKKGAAIDKKRHHVLQTVHPSPLSAHRGFFGCKHFSKTNELLKKSGKKPIDWKAL
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttttccaacacaggctgccttaggcttttacgtgcacaaatgtccgatttttttgtc
aagcgaacacgaagttcaaccagatgtattaaaatactatctcaggagaaaaaacaaaag
ttggagagcgacggagttacatcctcaccgtccctgagtcctgaacaactcgaacggata
tctaataacaagaaggcggctctgaaacggctcgctgcaaaccaggctgaaccgaaccga
attggagagagctggagggaagctctaaacgcagagttcgggaagccctactttaaatca
ttaatgtcgtttgttgctgcggagaggcaaaagcacaccgtctatccacctgaaaatgaa
gtttttacctggacacaaacttgtgacataaaagatgtaaaggttgtgattcttggccag
gatccttatcatggacctaaccaggctcacgggctgtgtttcagcgtgcagagacctgtt
cctcctccaccaagcttgctgaacatctttaaagaactggcttcggacgtcgaaggcttt
gagcagcctggtcatggagatcttacaggatgggcaaaacaaggagttctgttgctgaac
gctgtgctgactgtgcgtgcacaccaggccaactctcacaaagacaagggctgggagact
ttcactgacgctgtgatacactggctcagcaccaacacgcagggtcttgtttttattctc
tggggctcttatgcacagaagaagggggctgccatcgacaagaaacgacaccatgttctg
caaacagtccacccctcgcctctctctgctcaccggggcttctttggatgcaaacatttc
tcaaagaccaatgaactgctgaagaaatcaggaaagaagcccattgactggaaagctttg
tga
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