Puntigrus tetrazona (Sumatra barb): 122345231
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Entry
122345231 CDS
T08985
Symbol
clip1a
Name
(RefSeq) CAP-Gly domain-containing linker protein 1 isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
122345231 (clip1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ptet03036
]
122345231 (clip1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ptet04812
]
122345231 (clip1a)
Chromosome and associated proteins [BR:
ptet03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
122345231 (clip1a)
Cytoskeleton proteins [BR:
ptet04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
122345231 (clip1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
CLIP1_ZNF
Motif
Other DBs
NCBI-GeneID:
122345231
NCBI-ProteinID:
XP_043095087
LinkDB
All DBs
Position
5:complement(26821298..26851848)
Genome browser
AA seq
1573 aa
AA seq
DB search
MSTSKPSGLKAPSKIGRSANAGVTKTSPSAGAAKSTQGDKSSAEAQDAGEQFKIGDRVWV
NGNKPGVIQFLGETQFAPGQWAGIVLDEPIGKNDGSVSGVRYFQCEPLKGIFTRPSKLSR
TEGEPDGTTTAPPSRAASPTPSTASVSASTKKPASPTKTSTPASELVRSKSESVSNLSET
GSVKKGDRELKINDRVLVAGTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRY
FQCQPKYGLFAPVHKVTRIGFPSTTPAKAKTTVRKTAATPSGLKRSPSASSISSMSSVAS
SASCKPSRTGLLTETSTRYARKISGTTALQEALKEKQQHIEQLLAERDLERAEVAKATSH
VGEVEQELTILREGQEQYVLEVDAKMDQLRALVEAADREKVELLNQLEEEKRRVEDLQFR
VEEACITKGDLETQTQLEHALLKELEQSLLFEKTKADKLQRELEDSRVATVSEKSRILEL
ERDLSLRDKEVASLHKSLEALSGQDGVTDSTMAILQEELCSLRKQLVAQSDSHQAELSSL
RQILATREKEHGESLSQLQSSSGRLSKDNEQLLGQLAKSKEENSNIIEEWCAKLASVEAS
HLQALEELKTSHEASKSELLDVHNALEQLKLKQKLDLEDLANRHASETVGWTGEAKEHKA
QLLKVTEEKERLVETLRTNLEKVEEQHLVEMEEVLGKLHSAELRVKELEDTGDKLGQQLH
EKSQEAMEQKTALQTLQSQQSQGNQEMQRLLTQIEEAKSQSRSQEEKATGLNSVLEAKQQ
ELNGLLQEKISLEQEVSELKQNLEKTSNDQAKSAQTNQELCDELRNKEEKCTSLSAELKD
MKSQCAGLQRNLKANEERIVLLTKDKTKLENDIMDMTKSSGDSSTLITKLNEDIKQKERR
LDELQNQLEEEREKAALAEEKQSHAQVQAENEAQSLEKRHQAELSSLQERIKLLEKGAED
NQAKAKDLLSSGEKALADAAEKHTKEMQELNGKFEKVQQELQVSQNESLELRKQIEELKT
FKEKATISEKAEQTAQAAVQRLTEENQQLQKDKSEAEALVTQHKNSIQEMHSKLDALKQQ
NSEYQENLNSDSQKISSLSKEIEELKEADTEKARAVEALKNDKEKLTLDLASSHKDSNIL
LNFKKECDSLNDQLKEVKRRESTFKSESEKEKSALQQSLQTQSALISEKDKELDSLRNEL
DALKQQSSEYQENLSSDSQKISSLSKEIEELKQAAVEKAQAVEALKNEKEKLTVDLANSH
KDSNILLNLKKECDNLNDQLKEMKTRESTLTSESEKEKSALQQSLQTQSALISEKDKELD
SLRNEFKKECDSLNSQLKKIKMSECVLRRESTLTKETEKEKAALQQSLQTQSALISEKEK
ELDSLRNEISGLRDSTQVLQSNLKSHKSENTLLQERVKNLETSLADSQITSKGDDASDDS
ALQVWKEAKENAERQVEFLNSVIVDLQRKNEDLKAKLEKMAEAAINGNGATEMDSQNSHA
EPTIKKKPPPRLFCDICDCFDLHDTEDCPTQDQMLDSPPHTAYHGSPNDERPYCDICEVF
GHWTESCNDDQTF
NT seq
4722 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcaaaacccagtggactcaaagcgcccagcaaaattggccgatcagccaat
gccggggtaacaaagacgtctccttctgcaggtgctgctaaatctactcaaggtgacaaa
tcgtcagccgaagcccaggatgcaggagaacagttcaagattggggatcgtgtctgggtt
aacggcaacaagccgggcgtcattcagtttttaggagagacccagtttgccccgggccag
tgggctggaattgtacttgacgagccgattgggaaaaacgacggttctgtgtcaggtgtg
cgctattttcagtgcgaaccgctgaaaggtattttcacgcggccgtccaagctttcacgc
acagaaggtgagccggatggaacgacgacggctcccccgtcccgtgctgcgtcacccaca
ccctccactgcatcggtgtccgcttcaaccaagaaaccagcttcacccactaaaacctct
acgccggcctcggagctggtgcggtcgaagagcgagtcggtgtccaatctgtcggagacc
ggctcggtcaagaaaggtgatcgggaactgaagatcaacgaccgagtgctggttgctggc
acaaaagctggtgtagtgcgtttcttaggcgaaaccgattttgccaagggtgagtggtgt
ggagttgagctggacgagcccttgggaaagaatgatggtgctgtggctggaaccaggtat
ttccagtgccagcccaagtacggtctgtttgccccagtgcacaaggtgacccgtataggt
tttccctccactacccccgccaaggcaaagaccaccgtgcggaagacagcggccacaccg
tcaggactgaaacgcagccccagcgcctcctccatcagctccatgagctccgtggcttca
tctgcgagctgcaagccaagccgaacaggactgttgactgagacgtctacgaggtatgcg
aggaagatctctggcacgacagcacttcaggaagccctgaaggagaaacagcaacacatc
gagcaactcctcgcagaacgtgacctggagagagccgaggttgccaaggcaaccagccat
gtgggcgaagtggagcaggagcttacgatattgagagaaggccaggagcagtatgtgttg
gaggttgatgccaaaatggaccagctgcgagcgcttgtggaggctgcggacagagagaag
gtggaactgctcaaccagctggaggaggagaagaggagggtggaggacctgcagtttcgg
gtggaggaagcttgcattaccaaaggggatttggagacgcagacgcagctggagcatgcc
cttcttaaggagcttgaacagagtcttctctttgaaaagaccaaagctgacaaacttcag
agggagttagaagactctagggtggccacagtctctgagaagtcccgtatactggagttg
gagcgggatctttcgttaagagacaaggaggtagcttcacttcataagtcactggaagct
ttatcaggtcaggatggggttactgactccaccatggcaatactccaggaggaactctgt
tccctccgtaaacagctggtcgctcaaagtgacagtcaccaagcagagctgtcttccttg
cgtcagattcttgcgactcgagaaaaagaacacggtgaatctctgtcacagctccagtca
tcctcaggtcgcttatcgaaggataacgagcagcttttaggtcagttggcaaaatcaaag
gaggagaattcaaatatcatcgaggagtggtgtgctaaactagcatcagtcgaggcctca
cacctgcaagccttggaggagctcaaaacctcgcatgaggcaagcaaatctgagctgctg
gatgtacacaatgctctggaacagttgaaattgaaacaaaaactggatctcgaagacctt
gctaacagacatgcttctgaaaccgtggggtggacgggtgaagccaaagagcacaaggca
cagctcctgaaggtcaccgaagagaaagaacggctcgtagaaacgctacgcaccaatttg
gagaaggtagaggagcagcacctggtggagatggaggaggtcttgggaaaacttcacagt
gctgagctcagggtaaaagagctagaggacacaggagataagttaggtcagcagttgcat
gaaaagtcacaagaagctatggagcaaaaaacagcccttcagactctgcagtcacagcaa
agtcaagggaaccaagagatgcaaaggttattgacccaaatagaggaggcaaaaagccaa
tccagatctcaggaagaaaaggccactgggttaaactctgtactagaggctaaacagcaa
gagctgaatggcctgttgcaggaaaagatctctctggagcaagaagttagtgagctgaaa
cagaatcttgaaaaaacatctaacgatcaagccaaatctgctcagactaatcaagagtta
tgtgatgagctcaggaataaagaggaaaaatgcacatccctctctgctgaattaaaggat
atgaagagtcagtgtgctggtttacagagaaatttgaaagcaaacgaagaaaggatagtg
ctgctgaccaaagacaagactaaacttgagaatgacattatggacatgacaaagtcttcg
ggagacagttctactctgataacaaagctgaatgaggatatcaagcagaaagaaaggaga
ctagacgaacttcagaaccagcttgaagaggagagggagaaggcagctctggctgaggag
aaacagtctcatgcgcaagtccaggctgagaatgaggcccaaagccttgagaagagacac
caagcagagctttccagcctgcaggagaggatcaagcttttggagaaaggtgctgaggac
aatcaggctaaagccaaagacttgctttcttcgggagagaaagctctcgcagatgctgcg
gaaaagcatacaaaagaaatgcaggaactaaacggcaagtttgaaaaagtgcaacaggag
cttcaagtgtctcaaaatgaaagcctggagctgagaaaacagattgaggagttgaagacc
ttcaaagaaaaagctacaatctcagagaaagcagaacagactgcacaggccgcagtgcag
agactgaccgaggagaaccaacaacttcagaaagacaagtctgaggctgaggctctggtg
acgcagcacaagaactcaattcaagaaatgcatagcaagctggatgctttgaagcagcag
aactcagagtatcaagagaacctgaattctgacagtcagaagatcagcagcctcagtaaa
gagattgaggagttgaaagaagcagacactgaaaaagcccgggcagtcgaggctctgaaa
aacgataaggaaaagctaaccctggatcttgccagcagccataaagacagtaacattctg
ctaaatttcaaaaaggagtgtgacagtctcaacgaccaactgaaggaggtgaaaaggagg
gaaagcactttcaaaagtgaatcagaaaaggagaaatcagcacttcagcagtctcttcaa
acacagagtgccttgatctcagaaaaggacaaagaattagactctctgaggaatgagctg
gatgctttgaagcagcagagctcagagtatcaagagaacctgagttctgacagtcagaag
atcagcagcctcagtaaagagattgaggagctgaaacaagctgctgtcgaaaaagcccag
gcagtcgaggctctgaaaaatgagaaggagaagctaaccgtggaccttgccaacagccac
aaagacagtaacattctgctaaatctcaaaaaggagtgtgacaaccttaatgatcaattg
aaggagatgaaaacgagggaaagcactttaacaagcgaatcagaaaaggagaaatcagca
cttcagcagtctctccaaacacagagtgccttgatctcagaaaaggacaaagaattagac
tctctgagaaatgagttcaaaaaggagtgcgacagcctcaatagtcagttaaagaagata
aaaatgagtgaatgtgttctgcgcagggaaagcactttaacgaaagaaaccgaaaaagag
aaagcagcacttcagcagtccctccaaacacagagtgccttgatctcggagaaggaaaag
gaattagactctctgagaaatgagatatcaggtctgcgcgattcgacgcaggtgctgcag
tccaatctgaaatctcacaagagtgagaatactttgttgcaggagcgagtgaagaatctg
gagacgagtttagctgactctcagatcaccagcaaaggagatgatgcctcagatgattct
gctttacaagtgtggaaggaggcaaaggaaaatgctgaacggcaggttgaattcctgaac
tcggttattgtggatcttcagcggaagaacgaagacctaaaagcaaaattagagaagatg
gctgaagcagcgatcaatggaaacggtgcaacggaaatggacagccaaaacagtcacgcc
gagccgacgattaaaaagaaaccccctccacgtctcttctgtgacatatgtgactgcttc
gacctacacgacacggaggactgtcccacccaggaccagatgctagattccccgccgcac
accgcctatcacggcagtcccaacgatgaacgaccttactgtgacatctgtgaggtcttc
ggccattggacggagtcctgcaacgacgatcaaactttctaa
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