Puntigrus tetrazona (Sumatra barb): 122345234
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Entry
122345234 CDS
T08985
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptet04131
]
122345234 (arhgef28a)
Membrane trafficking [BR:
ptet04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122345234 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH_16
RhoGEF
PH
SOS1_NGEF_PH
C1_1
PH_13
C1_2
Ank_2
PHD
PilJ
DUF2205
PHDvar_NSD
Prok-RING_1
DUF7588
Phage_GP20
NPV_P10
Motif
Other DBs
NCBI-GeneID:
122345234
NCBI-ProteinID:
XP_043095099
LinkDB
All DBs
Position
5:6105795..6162485
Genome browser
AA seq
1827 aa
AA seq
DB search
MELSSGEVPLYGQVEVRAKLQVSSRVQEEADYYVVLVGSSLHHVTTAHRAEDEGSIKFTV
PGHDVPEKVSVEVYCCSRDGTGPMSLLCDSGPLSLEYVRDKAQELAEQLMNLTSSSYQDI
LRKFCPEKMFSSETNHLDQTGRHGTDGVCDPRELFRLESLAEQGLNICEQGNFSQREAPG
TSEFNGEHRCTAVDEKITRALANLHFLGWDSRAGQDKQDLLSRETPLHVAIHMGLPHLSH
FLLLESEGQRMVPVVDREGHSPLTLAQKHGDPTIISALTDPSSCSAWRPVWMCQMWTDGS
RQLRICPVTEAVSLTAKNGTQIDAQHSIQLYREKSGETDALARVGQPSEPSEESTHRSDV
CDADSNGQLRIEDEALVDSVFEEQLVLCLDEEDEDLNTFNSEKLCSSPGSCTPFHLHSSD
AAAVRLTAMLRGSAKDNDLNMKYAVSGVTEDSSGTDSGVWRMSDTGVLSPGTVDMPPAVK
DHEVQRVRQHASHSFSPTSPAGLMLDRLLRATRPAELAYNSSSSPTESCDLRSPILSLSP
SLVALEMDSEEDDDDDILMKKPLPQLHPELKNSADDRILFRPAPDLTCTRSHSASSACNP
TPAKDIEQGIRLRSYSYTSPKISLLPPRFSRDAHPPPTDLNQDGALSSSSGSRSLLQALS
LSKSLSLLNPVKHRACSTSEQPQEKRELRFRRRAQSADDETSAELANSLQHLTLSEFLKE
IEEEEWDKYIIPSKTESEKYKVSRTFSFIKSRMYSTRNKSKGKGKERETKEKQVNGHQFT
AGSVLGSTLCEICGKPASGKEVLHCTHCAVSVHKGCKDSSTPCLKKPQDKYSVTVKSRTA
SLPQNFIVRESSSSSSQIPASASLPVMTSRDSTPLPCSLSKSVPSVTERLSCSPEADSEA
PPWRNHIQPEEVLQTMESSTSTDSSLIEDSVDCPLQNELVMNAVDLEAESWSLAVEPQFC
KMQEKRIIKRQDVIYELMQTELHHVQTLMIMAEVFRRGMREEVGLDVDTIGRIFPCLDEL
LLLHRDFLSSMRERRQSCVQSSSSKNYLIHRVGDIFLQQFSQENAEKMKQLYGEFCSRHT
EAVSYFKELQQQNKRFQLFIKQQSSNSLVKRREIPECILLVTQRITKYPVLLERILHYTE
EGTEEHADLSRALVLIRELISAVDQSVSQYEQNQKLSEVLGRMENKCSTKLKSGYTFRKQ
DITSGRALLHQGPLLWKTATGRLKDVLAFLLSDSLVFLQEKDQKYIFAAVDQKPPVISLQ
KLIVREVANEERGMFLISASSAGPEMYEVHAASKDERNAWMRLIREAVESCPEEEDETTS
ESEEERRVTEAKVQKIHRLQESLCGHDHLICANLEEKLHIYAELSVMAGRRETGPEPRLL
VRPSTEDIPQAGVLLSAALKEAENLKAALSSSCATTAAVLSCPEEQTQPEPCSPSSPLPP
ENQSPLMDTLLRDEDEWRGEESLETQAFNHSSDTDHNIHLKVSQSVQSLTQLLYSLQAAV
TIQDSYYEVQRLLLLLSSPSPHPHSRPLPITRSSQTLQEQERQREAERRREELADVVRLR
GTLVRERQQWERECQVRQLQQSELEASLEQRELVCHLEERRLQSERQELQEQLQEYQQSL
ERLREGQRSVEKEKEKLDAQRRLLESLKQGYQQNLPAMVIPLDGQQTQDAGHHHLSGQDE
HGSIFVNEAAFTSPSLNNRNIHLQHHPHRLHQTVHLHSGYSDSPSAQNSLNSLLARSNHR
QSSAGVSDAPAGHESWTEGTMCSTPLRSLTEIPNNDVGQLGHVQEPWSAGVTGAGLHQAD
VLLVNQPFVTMETENRDTDGEENIVYL
NT seq
5484 nt
NT seq
+upstream
nt +downstream
nt
atggagctcagcagcggagaggtgccgctttacggtcaggtggaggtccgtgcgaagctg
caggtgtcttcgagggttcaggaagaagctgactactatgtggttcttgtgggctcgtcc
cttcaccacgtaaccaccgctcacagggcggaggatgaaggctcgattaaattcactgtg
cctggccacgatgttccagagaaagtgtctgtggaggtctactgctgttcgagggacggc
acgggtcccatgagcctcctctgcgattcaggaccgctgtctctggagtacgtacgggac
aaggcccaagagctggcggagcagctcatgaacttgacgtccagcagctatcaggatatc
ttaaggaaattctgcccagagaaaatgttttcatctgagactaaccatctagaccagact
ggccggcatgggacagacggggtttgtgatccaagggaattatttcgattggaaagccta
gcagaacaggggctcaatatttgtgaacagggaaatttcagccagagagaagccccagga
acatcagaatttaacggagagcacagatgcacggcggttgatgaaaaaatcacacgggcc
ctggctaacttgcactttctgggctgggacagccgggccggacaggataagcaagatctc
ctttccagggaaacgcctctacatgttgccatacatatggggctcccccacctcagtcac
ttcctcctcctggagtctgaaggtcagaggatggttcccgtagtcgaccgagaaggccat
agccctctcacgctggctcagaagcacggagacccgaccatcatcagcgctctgacagat
ccctcgagttgcagtgcgtggaggccggtgtggatgtgtcagatgtggacggacggctct
cgccagcttcgtatctgccccgtcaccgaagctgttagtctgaccgcgaagaacggcaca
cagatagatgcacagcacagtatccagctgtacagggagaagagcggagagacagatgca
ctcgcgagggtggggcaaccgagtgagccgtcagaagagagcacacacagatccgatgta
tgtgacgcagattcgaacggccaactgagaatcgaggatgaagccctggtggacagtgtc
tttgaagaacagcttgttctctgtctggatgaagaggatgaagatctaaacacatttaac
tcagagaagctgtgctcctctcctggctcctgcactccatttcaccttcattcctcagac
gccgctgccgtcaggctcacagccatgctcagaggctccgctaaggacaatgacctcaat
atgaagtacgctgtttcaggcgtcacggaggacagctctgggacagatagcggtgtgtgg
cgaatgtcagatacaggggtcttgtcaccagggactgtagatatgcctccagctgttaaa
gatcatgaagtgcagagagtacggcaacacgcttctcattctttctctcccacctctcct
gcgggactgatgctggatagactcctgcgtgccacacgacctgctgagttggcatataac
agctctagctcacctacagagtcatgtgacctaagaagtccaatcctctctctaagcccg
agtttggtggccttggaaatggacagcgaggaggatgatgatgatgacattttaatgaag
aagccccttccccagctgcatcctgagctcaaaaacagcgcagatgatcggattctgttt
aggcccgcccctgatcttacctgcacgcgttctcactccgcctcctccgcctgtaacccc
acccctgcaaaggatattgagcagggcatccgtcttcgttcatattcctacacctccccc
aaaatcagcctgctgcctccacgattcagtagggacgcccaccctccacccaccgacctc
aaccaggatggcgccctctccagcagcagtggcagcaggtctctcctacaggcactgtct
ctgtctaaatctctgtctctgctcaaccctgttaaacaccgtgcctgcagcacatcagag
cagcctcaagaaaaaagggagttaaggtttcgtagacgtgctcagtcggccgacgatgag
accagcgcagagctggccaactccctccagcacctcacgctctccgaattcctcaaagag
attgaggaagaggaatgggacaaatatatcatcccttccaaaacagagtcagaaaaatac
aaagtcagccgcacattcagctttataaagagccgaatgtacagcactcgcaacaagagc
aaggggaaaggaaaagagagagagaccaaagagaagcaggtcaacggacaccagttcaca
gcgggatctgtcctggggtcaacgctctgtgagatctgcggcaagccagcttcagggaaa
gaggtcctccactgcacacactgtgcagtgagtgtccataagggctgtaaagattcttct
acgccatgcctgaagaaaccccaagataaatattctgtgacagtaaaaagcaggacagcc
tccctccctcagaattttatagtgcgtgaaagttcctcctcgtcctctcagatccccgcc
tccgcctcacttcctgtgatgacatcacgagactctactcctcttccttgctcactgtct
aaaagtgtgccttcggtcacagaaaggcttagttgtagcccagaagcagatagcgaggcc
cccccctggaggaaccacatccaaccagaggaggtcctccaaaccatggagtcctcaaca
tccactgattcctcccttatagaagactctgtagattgccccctacagaatgagctggta
atgaatgccgtggatttggaggcagagtcatggagcctagcggtggagccccagttctgc
aagatgcaagaaaaacgcatcatcaagagacaggatgtcatttacgagctcatgcagacc
gagctccaccacgttcagacgctcatgataatggcggaggtcttcaggcggggaatgcgg
gaggaagtcgggctggatgtggacactatcggtcggattttcccttgcttagatgaactg
cttcttctccatcgtgacttcctctcatcgatgagggaacgtcggcaaagctgcgttcag
tccagcagcagcaagaactacctcatccaccgtgtgggtgacatttttctgcagcagttt
tcccaggagaatgcagagaagatgaagcagttgtatggcgagttttgcagccgtcacaca
gaagcggtcagctacttcaaagagcttcagcagcagaataagagatttcagctctttatc
aaacaacagagtagcaactcgctggtaaagaggcgagaaatcccagaatgcattttatta
gtgacgcagcgaattacaaagtatcccgtcctcctggagagaatactgcattatacagag
gagggcacagaagagcatgctgacctgtctcgtgcgctagtcctgatccgagagctgatc
tccgctgtggaccagagcgtgagtcagtacgagcagaaccagaagctgagtgaggtcctg
ggtcgcatggagaacaagtgctcgactaaactcaagagcggttacaccttccgcaagcag
gacatcaccagtggcagggctctgctgcaccagggtccactgctctggaagacggccaca
ggaagacttaaagatgtcctggcatttttgctgtctgattcattggtgttccttcaggag
aaagatcagaaatacatctttgctgctgtggaccagaagcctccggtgatctcgctccag
aagctgatcgtgcgtgaggtggccaatgaggagagaggcatgtttctgatcagcgcgtct
tcagctgggcctgagatgtatgaggtgcacgcagcctctaaagatgaacgcaatgcttgg
atgagactcatcagagaggctgtggagagttgccctgaagaggaggatgaaactacaagt
gagtcagaagaggaaagaagagtcacggaagcaaaggtccaaaagatccacaggctacaa
gagtctttgtgtggccacgatcacctcatctgtgccaatctggaggagaagctacacatc
tatgccgagctttcagtcatggcaggacgacgtgagacaggtccagagcccagactgctg
gtacggcccagcaccgaagacatccctcaggccggagtattgctcagtgctgctcttaaa
gaggcggagaacctgaaagcagcgctctcttcttcttgtgctactactgccgctgtcctg
tcttgtccagaagagcagacccaacccgagccttgctctccatcctcccctctgccccca
gaaaaccagagtccactgatggacaccctcctgagggatgaggacgagtggagaggagag
gaaagcttagaaacccaggcctttaatcacagctcagacactgatcacaatatacaccta
aaggtgagtcagagtgtgcagagtttgactcagctgctgtacagtctacaggcagcagtc
accatccaagacagttactatgaagtccagaggctcctcctcctgctatcaagcccctcc
cctcacccacattcccgcccactgcccatcactcgcagcagccagaccctgcaggagcag
gagcgccagcgggaggcggagcgccggcgggaggagctggcagacgtggtccgtctacgg
ggcaccctggtacgagagcgacagcagtgggaacgggagtgccaggtgcgacagcttcaa
cagtctgagctggaggcgtccctggagcagagagagctggtgtgccacctagaggagcgg
aggctgcagagcgagcgacaggagctccaagagcagctgcaggagtaccagcaaagcctg
gagaggctccgagaaggccagaggagcgtggagaaggagaaggagaagctggatgctcag
cggaggctgctggagagtttaaagcagggctaccagcagaacctgccagctatggtcata
ccattggatggacagcagacacaggacgcgggtcaccatcacctgagcggtcaggatgag
cacggatctatttttgtgaacgaggcagcattcacgtctccctccctgaacaacaggaac
atccaccttcagcatcatccacaccgccttcatcagactgtccacctgcactcaggatac
tcggattctcccagcgctcagaacagtctcaattcactcctggctcgatccaaccacaga
cagagctctgctggagtatccgatgctcctgcaggacacgagagctggactgaaggaaca
atgtgctcgacccctctgagaagcctaacagagatcccaaacaatgatgtgggtcagctc
ggccatgtccaagaaccttggtcagctggcgtaactggggcggggcttcatcaagcagac
gtcctgctcgtcaaccagccctttgttaccatggagacagagaacagagatactgatgga
gaggagaatattgtgtatctctga
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integrated database retrieval system
