KEGG   Puntigrus tetrazona (Sumatra barb): 122345309
Entry
122345309         CDS       T08985                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
ptet  Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ptet00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    122345309 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:ptet03009]
    122345309 (wdr36)
Ribosome biogenesis [BR:ptet03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    122345309 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WD40 WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd EIF3I ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_EML WDR90_beta-prop_4th WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_WDR75_1st Beta-prop_Vps41 WD40_RFWD3 Beta-prop_HPS5 Utp12 Cytochrom_D1 Beta-prop_LRRK2
Other DBs
NCBI-GeneID: 122345309
NCBI-ProteinID: XP_043095268
LinkDB
Position
5:24112303..24126105
AA seq 893 aa
MSAGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHRESYVLTAVGQGFHTYNVKKLGIVAV
SNALPEDISALAADSMLVYAAYGKLISAFAKNREVVHTYTGHQADVHLLLPFGDHLVSVD
KGNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNIKSNKL
LFTFPGWASAVTVLQQTPAIDVVGVGLASGQIIIHNIKFDETLMKFRQDWGPVTALSFRT
DGHPIMASGSPLGHIGLWDLEEKKLVSQMRDVHTTAIAGLTFLQSEPLLITNGADNSIRV
WIFDVAGGNGRLLRQRSGHSAPPTKILHNDQSGFNILSAGQDGTLQSFSTVHEKFNKSLG
HGTLNKKRAKKKGVLHDTAKLPAITTFASETARQSDWDGIIACHRGFLVTTTWNYQKGSI
GAHKLEPERFNKNRSLTVHATAVDITSCGSFAVIALSSGHIDVYNMQSGIHRGHYGKDQA
HAGPVRGVSVDALKQVTVSVGADSLLKIWRFKSKELLHKHSLPASPASSLLHRDSGMLAI
SLDDFTVHILDMETRRIVRRFSGHRGQINDMTFSPDGRWLITASMDCSIRTWDLPSGSLV
DCFLVDAAAVSLSMSPTGNFLASSHVDGLGIYLWSNNTLCSMVSLRPLPADYEPTVIMLP
GTCPSKDTEEEEVSDTDGSEMLEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKNKP
KEPPKLPKAAPFFIPTIPGLVPQFALPTIPSEDQSKVVNLGVLAQKSTFYLQLENALDNN
SYEEPVKLLRELGPSAIETELRALSPDMGGEVRVMQSFLKMISSILQSKRDFDLAQAYLA
LFLKLHLRFIADQPGLMEEAESVSACLEETWMSMQTLLNHNICLLSYIKSALL
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtctgcgggaaagaaaggaagcgtgatcttctctggattccgcgcgctgggactttac
tcgaatcatctggcgcacgtgcttcgcttccataagaaacacagagagtcctatgtgctc
actgcagtcggacagggcttccacacctataacgtgaagaaacttggaatcgttgcagtc
agtaatgccctcccagaagacatttcagccctggcagcagatagtatgctcgtctatgcc
gcgtacgggaaacttatctctgcttttgcaaaaaaccgagaggttgttcacacgtacacg
ggccatcaagctgatgtgcatttactgttgcctttcggagatcatctggtttctgtcgac
aagggcaacgttgtcattatttgggatgtggagtctgaagacacatacctgcagatttcg
tatgacaaagcttcattcgaagtctccgctctgatgcatcccagcacctacctgaacaaa
atcctgtttggaagcagtcaggggagccttcagttatggaacatcaaatcaaacaaactc
ctttttacatttcctggatgggcatcagctgttactgttcttcagcagactccagctata
gatgtagtgggtgtgggtttagcatctggccagatcatcattcacaacatcaagttcgat
gaaacgctgatgaagttccgtcaagactggggtccggtcacggctttatccttcaggaca
gatggacatccaataatggcatctggcagtcctctcggacacataggactgtgggattta
gaggagaagaaactagtcagtcagatgcgggatgttcacacaacggccatcgctggcctc
acgtttcttcaaagtgaaccccttctgatcactaacggagcagacaattccatacgggtg
tggatttttgatgttgctggagggaacggacgtctgctaagacagcgatctggtcacagc
gccccaccaacaaagattctacacaatgaccagagcggctttaacattctcagcgcaggt
caagatggtactttgcagtctttttcaacagttcatgaaaaattcaacaagagtttgggc
catggcacactcaacaaaaaaagagctaaaaagaaaggtgtgctgcatgacactgcaaaa
cttccagccatcacaacctttgcctcagaaactgctcgtcagagtgactgggatggcatt
attgcatgccaccgtggtttccttgtgactacgacatggaactaccagaaaggttcgatt
ggtgcccacaagctggaacccgaacgcttcaacaagaaccggagcctcactgtccatgca
actgctgttgatatcacgtcctgcgggagttttgcagtgatcgcactgtcttcaggacac
atcgatgtgtataacatgcagtctggtattcatcgagggcattacggaaaggaccaggcg
cacgcagggcctgtccgtggggtctcggtggatgccctaaaacaggtgaccgttagcgtt
ggagcagatagtcttctgaaaatctggaggttcaaatccaaggagctattacataaacac
agcctgccagcttccccggcctcatcattgcttcacagagacagcgggatgctcgccatc
tctctggatgattttaccgttcacattctggatatggagactaggagaattgtccgcaga
ttctctgggcatcgtgggcagataaacgacatgacatttagtccagatggacgttggctg
attacagcatctatggactgctccatcagaacatgggatcttccatctggcagcttggtc
gactgtttcctggtagatgcggcagccgtcagtctcagtatgtcccctacagggaacttc
ctggcctcgtcgcacgttgatggtctaggtatttatttatggtccaataacacgctgtgc
agcatggtgtcattgcgccctctacctgcagactacgagccgaccgtgatcatgctgccc
ggcacctgcccaagcaaagataccgaagaggaggaggtttcagatactgacggttctgag
atgctcgagtacatttctccagcacagctggatgaacatctggtcacactctctctgctt
cctgactcacgctggaagaacctgctgcatctggatatcatcaagaaaaagaacaaaccc
aaagagcccccaaaattgccaaaagctgcccccttcttcattcccaccatcccagggctg
gtgccgcagtttgctctacccacaattccctcagaggaccagtctaaagttgttaacttg
ggagtgttggcacagaagtccaccttctaccttcagcttgaaaacgctttagacaacaac
tcatacgaggagccggtgaagctgttgagagagttgggcccctcggccattgaaacagaa
cttcgggccctgtctccagatatgggtggagaggtccgagtcatgcagagcttcctcaag
atgatcagcagcattcttcagtccaaaagagatttcgacctggctcaagcctacctagca
ttgttccttaagctccatctacggttcatcgcagaccagcccggactgatggaggaggca
gagagtgtgtccgcgtgcctggaggagacatggatgtccatgcagacgctcttaaaccac
aacatttgtctgttgtcttatatcaagagtgcacttctgtaa

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