Puntigrus tetrazona (Sumatra barb): 122345309
Help
Entry
122345309 CDS
T08985
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
KO
K14554
U3 small nucleolar RNA-associated protein 21
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122345309 (wdr36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptet03009
]
122345309 (wdr36)
Ribosome biogenesis [BR:
ptet03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
122345309 (wdr36)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Utp21
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_EML
WDR90_beta-prop_4th
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_WDR75_1st
Beta-prop_Vps41
WD40_RFWD3
Beta-prop_HPS5
Utp12
Cytochrom_D1
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
122345309
NCBI-ProteinID:
XP_043095268
LinkDB
All DBs
Position
5:24112303..24126105
Genome browser
AA seq
893 aa
AA seq
DB search
MSAGKKGSVIFSGFRALGLYSNHLAHVLRFHKKHRESYVLTAVGQGFHTYNVKKLGIVAV
SNALPEDISALAADSMLVYAAYGKLISAFAKNREVVHTYTGHQADVHLLLPFGDHLVSVD
KGNVVIIWDVESEDTYLQISYDKASFEVSALMHPSTYLNKILFGSSQGSLQLWNIKSNKL
LFTFPGWASAVTVLQQTPAIDVVGVGLASGQIIIHNIKFDETLMKFRQDWGPVTALSFRT
DGHPIMASGSPLGHIGLWDLEEKKLVSQMRDVHTTAIAGLTFLQSEPLLITNGADNSIRV
WIFDVAGGNGRLLRQRSGHSAPPTKILHNDQSGFNILSAGQDGTLQSFSTVHEKFNKSLG
HGTLNKKRAKKKGVLHDTAKLPAITTFASETARQSDWDGIIACHRGFLVTTTWNYQKGSI
GAHKLEPERFNKNRSLTVHATAVDITSCGSFAVIALSSGHIDVYNMQSGIHRGHYGKDQA
HAGPVRGVSVDALKQVTVSVGADSLLKIWRFKSKELLHKHSLPASPASSLLHRDSGMLAI
SLDDFTVHILDMETRRIVRRFSGHRGQINDMTFSPDGRWLITASMDCSIRTWDLPSGSLV
DCFLVDAAAVSLSMSPTGNFLASSHVDGLGIYLWSNNTLCSMVSLRPLPADYEPTVIMLP
GTCPSKDTEEEEVSDTDGSEMLEYISPAQLDEHLVTLSLLPDSRWKNLLHLDIIKKKNKP
KEPPKLPKAAPFFIPTIPGLVPQFALPTIPSEDQSKVVNLGVLAQKSTFYLQLENALDNN
SYEEPVKLLRELGPSAIETELRALSPDMGGEVRVMQSFLKMISSILQSKRDFDLAQAYLA
LFLKLHLRFIADQPGLMEEAESVSACLEETWMSMQTLLNHNICLLSYIKSALL
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgggaaagaaaggaagcgtgatcttctctggattccgcgcgctgggactttac
tcgaatcatctggcgcacgtgcttcgcttccataagaaacacagagagtcctatgtgctc
actgcagtcggacagggcttccacacctataacgtgaagaaacttggaatcgttgcagtc
agtaatgccctcccagaagacatttcagccctggcagcagatagtatgctcgtctatgcc
gcgtacgggaaacttatctctgcttttgcaaaaaaccgagaggttgttcacacgtacacg
ggccatcaagctgatgtgcatttactgttgcctttcggagatcatctggtttctgtcgac
aagggcaacgttgtcattatttgggatgtggagtctgaagacacatacctgcagatttcg
tatgacaaagcttcattcgaagtctccgctctgatgcatcccagcacctacctgaacaaa
atcctgtttggaagcagtcaggggagccttcagttatggaacatcaaatcaaacaaactc
ctttttacatttcctggatgggcatcagctgttactgttcttcagcagactccagctata
gatgtagtgggtgtgggtttagcatctggccagatcatcattcacaacatcaagttcgat
gaaacgctgatgaagttccgtcaagactggggtccggtcacggctttatccttcaggaca
gatggacatccaataatggcatctggcagtcctctcggacacataggactgtgggattta
gaggagaagaaactagtcagtcagatgcgggatgttcacacaacggccatcgctggcctc
acgtttcttcaaagtgaaccccttctgatcactaacggagcagacaattccatacgggtg
tggatttttgatgttgctggagggaacggacgtctgctaagacagcgatctggtcacagc
gccccaccaacaaagattctacacaatgaccagagcggctttaacattctcagcgcaggt
caagatggtactttgcagtctttttcaacagttcatgaaaaattcaacaagagtttgggc
catggcacactcaacaaaaaaagagctaaaaagaaaggtgtgctgcatgacactgcaaaa
cttccagccatcacaacctttgcctcagaaactgctcgtcagagtgactgggatggcatt
attgcatgccaccgtggtttccttgtgactacgacatggaactaccagaaaggttcgatt
ggtgcccacaagctggaacccgaacgcttcaacaagaaccggagcctcactgtccatgca
actgctgttgatatcacgtcctgcgggagttttgcagtgatcgcactgtcttcaggacac
atcgatgtgtataacatgcagtctggtattcatcgagggcattacggaaaggaccaggcg
cacgcagggcctgtccgtggggtctcggtggatgccctaaaacaggtgaccgttagcgtt
ggagcagatagtcttctgaaaatctggaggttcaaatccaaggagctattacataaacac
agcctgccagcttccccggcctcatcattgcttcacagagacagcgggatgctcgccatc
tctctggatgattttaccgttcacattctggatatggagactaggagaattgtccgcaga
ttctctgggcatcgtgggcagataaacgacatgacatttagtccagatggacgttggctg
attacagcatctatggactgctccatcagaacatgggatcttccatctggcagcttggtc
gactgtttcctggtagatgcggcagccgtcagtctcagtatgtcccctacagggaacttc
ctggcctcgtcgcacgttgatggtctaggtatttatttatggtccaataacacgctgtgc
agcatggtgtcattgcgccctctacctgcagactacgagccgaccgtgatcatgctgccc
ggcacctgcccaagcaaagataccgaagaggaggaggtttcagatactgacggttctgag
atgctcgagtacatttctccagcacagctggatgaacatctggtcacactctctctgctt
cctgactcacgctggaagaacctgctgcatctggatatcatcaagaaaaagaacaaaccc
aaagagcccccaaaattgccaaaagctgcccccttcttcattcccaccatcccagggctg
gtgccgcagtttgctctacccacaattccctcagaggaccagtctaaagttgttaacttg
ggagtgttggcacagaagtccaccttctaccttcagcttgaaaacgctttagacaacaac
tcatacgaggagccggtgaagctgttgagagagttgggcccctcggccattgaaacagaa
cttcgggccctgtctccagatatgggtggagaggtccgagtcatgcagagcttcctcaag
atgatcagcagcattcttcagtccaaaagagatttcgacctggctcaagcctacctagca
ttgttccttaagctccatctacggttcatcgcagaccagcccggactgatggaggaggca
gagagtgtgtccgcgtgcctggaggagacatggatgtccatgcagacgctcttaaaccac
aacatttgtctgttgtcttatatcaagagtgcacttctgtaa
DBGET
integrated database retrieval system